Vertical and horizontal distribution of Desmophyllum dianthus in Comau Fjord, Chile: a cold-water coral thriving at low pH.

abstract：BACKGROUND:Amoebiasis is the third most common parasitic cause of morbidity and mortality, particularly in countries with poor hygienic settings. There exists an ambiguity in the diagnosis of amoebiasis, and hence there arises a necessity for a better diagnostic approach. Serine-rich Entamoeba histolyticaprotein (SREHP...

journal_title：PeerJ

authors： Manochitra K,Parija SC

更新日期：2017-06-28 00:00:00

abstract：Background:Dengue infection represents a global health issue of growing importance. Dengue non-structural protein 1 (NS1) plays a central role in the early detection of the disease. The most common method for NS1 detection is testing by lateral flow immunoassays (LFIAs) with varying sensitivity. In this study, we prese...

journal_title：PeerJ

authors： Tran TV,Nguyen BV,Nguyen TTP,Tran TT,Pham KG,Le QB,Do BN,Pham HN,Nguyen CV,Dinh DPH,Ha VT,Doan THT,Le HQ

更新日期：2019-09-25 00:00:00

abstract：Background:Fruit consumption is currently considered beyond the nutritional aspects because of the important roles in disease prevention and benefits to health. The objective of this study was to characterize the chemical profile and evaluate the antioxidant and antimicrobial properties of different fractions obtained ...

journal_title：PeerJ

authors： Nonato CFA,Leite DOD,Pereira RC,Boligon AA,Ribeiro-Filho J,Rodrigues FFG,da Costa JGM

更新日期：2018-11-28 00:00:00

abstract：:The interplay between historical and contemporary processes can produce complex patterns of genetic differentiation in the marine realm. Recent mitochondrial and nuclear sequence analyses revealed cryptic speciation in the Japanese mantis shrimp Oratosquilla oratoria. Herein, we applied nuclear microsatellite markers ...

journal_title：PeerJ

authors： Cheng J,Zhang N,Sha Z

更新日期：2020-11-05 00:00:00

abstract：:Histone lysine modifications are important epigenetic modifications in early embryonic development. JARID2, which is a member of the jumonji demethylase protein family, is a regulator of early embryonic development and can regulate mouse development and embryonic stem cell (ESC) differentiation by modifying histone ly...

journal_title：PeerJ

authors： Fu Y,Xu JJ,Sun XL,Jiang H,Han DX,Liu C,Gao Y,Yuan B,Zhang JB

更新日期：2017-12-21 00:00:00

abstract：Background:Conserving both biodiversity and ecosystem services is a major goal of the Convention on Biological Diversity. Hotspots for biodiversity in the Andes significantly overlap with areas with dense human populations that sustain their economy through agricultural production. Therefore, developing management form...

journal_title：PeerJ

authors： Quintana C,Girardello M,Balslev H

更新日期：2019-02-13 00:00:00

abstract：:The Eocene history of cetacean evolution is now represented by the expansive fossil record of archaeocetes elucidating major morphofunctional shifts relating to the land to sea transition, but the change from archaeocetes to modern cetaceans is poorly established. New fossil material of the recently recognized family ...

journal_title：PeerJ

authors： Boessenecker RW,Fordyce RE

更新日期：2015-09-10 00:00:00

abstract：Background:Stoichiometric relations drive powerful constraints in several fundamental ecosystem processes. However, limited studies have been conducted on the ecological stoichiometry of plants after the change of community composition induced by Stellera chamaejasme removal in alpine grassland in the Qinghai-Tibetan P...

journal_title：PeerJ

authors： Song M,Wang Y,Bao G,Wang H,Yin Y,Li X,Zhang C

更新日期：2020-06-23 00:00:00

abstract：Background:Maize (Zea mays L.) is a principal cereal crop cultivated worldwide for human food, animal feed, and more recently as a source of biofuel. However, as a direct consequence of water insufficiency and climate change, frequent occurrences of both biotic and abiotic stresses have been reported in various regions...

journal_title：PeerJ

authors： Kimotho RN,Baillo EH,Zhang Z

更新日期：2019-07-08 00:00:00

abstract：:Here we present the first two complete plastid genomes for Brunelliaceae, a Neotropical family with a single genus, Brunellia. We surveyed the entire plastid genome in order to find variable cpDNA regions for further phylogenetic analyses across the family. We sampled morphologically different species, B. antioquensis...

journal_title：PeerJ

authors： Valencia-D J,Murillo-A J,Orozco CI,Parra-O C,Neubig KM

更新日期：2020-01-28 00:00:00

abstract：:Prior work in our lab has shown that an expanding image on a computer screen elicits a hiding response in the Caribbean terrestrial hermit crab (Coenobita clypeatus). We conducted two experiments to identify what properties of the expanding stimulus contribute to its effectiveness as a visual threat. First we found th...

journal_title：PeerJ

authors： Shragai T,Ping X,Arakaki C,Garlick D,Blumstein DT,Blaisdell AP

更新日期：2017-11-30 00:00:00

abstract：:We study the glycosylation processes that convert initially toxic substrates to nutritionally valuable metabolites in the flavonoid biosynthesis pathway of tomato (Solanum lycopersicum) seedlings. To estimate the reaction rates we use ordinary differential equations (ODEs) to model the enzyme kinetics. A popular choic...

journal_title：PeerJ

authors： Astola L,Stigter H,Gomez Roldan MV,van Eeuwijk F,Hall RD,Groenenboom M,Molenaar JJ

更新日期：2016-09-20 00:00:00

abstract：:In group-living animals, heterogeneity in individuals' social connections may mediate the sharing of microbial infectious agents. In this regard, the genetic relatedness of individuals' commensal gut bacterium Escherichia coli may be ideal to assess the potential for pathogen transmission through animal social network...

journal_title：PeerJ

authors： Balasubramaniam K,Beisner B,Guan J,Vandeleest J,Fushing H,Atwill E,McCowan B

更新日期：2018-01-17 00:00:00

abstract：Background:"Quantile-dependent expressivity" occurs when the effect size of a genetic variant depends upon whether the phenotype (e.g. adiponectin) is high or low relative to its distribution. We have previously shown that the heritability (h2 ) of adiposity, lipoproteins, postprandial lipemia, pulmonary function, and ...

journal_title：PeerJ

authors： Williams PT

更新日期：2020-10-14 00:00:00

abstract：:Ocean acidification threatens the foundation of tropical coral reefs. This study investigated three aspects of ocean acidification: (i) the rates at which perforate and imperforate coral-colony skeletons passively dissolve when pH is 7.8, which is predicted to occur globally by 2100, (ii) the rates of passive dissolut...

journal_title：PeerJ

authors： van Woesik R,van Woesik K,van Woesik L,van Woesik S

更新日期：2013-11-21 00:00:00

abstract：:A prolonged preservation duration of blood specimens at 4 °C may occur due to the distance from collection points to storage facilities in many biobanks, especially for multicenter studies. This could lead to RNA degradation, affecting downstream analyses. However, effects of preservation durations at 4 °C on RNA qual...

journal_title：PeerJ

authors： Song J,Zhou J

更新日期：2020-04-10 00:00:00

abstract：:Sugarcane-soybean intercropping has been widely used to control disease and improve nutrition in the field. However, the response of the soil microbial community diversity and structure to intercropping is not well understood. Since microbial diversity corresponds to soil quality and plant health, a pot experiment was...

journal_title：PeerJ

authors： Lian T,Mu Y,Jin J,Ma Q,Cheng Y,Cai Z,Nian H

更新日期：2019-02-08 00:00:00

abstract：:The ichthyoplankton assemblage structure in the Yangtze Estuary was analyzed based on four springs in 1999, 2001, 2004 and 2007 in order to provide detailed characterizations of the ichthyoplankton assemblage in springs, examine the long-term dynamics of spring ichthyoplankton assemblages, and evaluate the influence o...

journal_title：PeerJ

authors： Zhang H,Xian W,Liu S

更新日期：2015-08-18 00:00:00

abstract：Background:High throughput DNA sequencing of bulk invertebrate samples or metabarcoding is becoming increasingly used to provide profiles of biological communities for environmental monitoring. As metabarcoding becomes more widely applied, new reference DNA barcodes linked to individual specimens identified by taxonomi...

journal_title：PeerJ

authors： Carew ME,Coleman RA,Hoffmann AA

更新日期：2018-06-13 00:00:00

abstract：:The Clarkia lagerstätte (Latah Formation) of Idaho is well known for its beautifully preserved plant fossils as well as a fauna of insects and fish. Here we present the first known tetrapod fossil from these deposits. This specimen, recovered from the lower anoxic zone of the beds, is preserved as a carbonaceous film ...

journal_title：PeerJ

authors： Calede JJM,Orcutt JD,Kehl WA,Richards BD

更新日期：2018-06-08 00:00:00

abstract：:Biological carbon sequestration by forest ecosystems plays an important role in the net balance of greenhouse gases, acting as a carbon sink for anthropogenic CO2 emissions. Nevertheless, relatively little is known about the abiotic environmental factors (including climate) that control carbon storage in temperate and...

journal_title：PeerJ

authors： Duchesne L,Houle D,Ouimet R,Lambert MC,Logan T

更新日期：2016-03-03 00:00:00

abstract：:Coarse-grained (CG) models have been successful in simulating the chemical properties of lipid bilayers, but accurate treatment of membrane proteins and lipid-protein molecular interactions remains a challenge. The CgProt force field, original developed with the multiscale coarse graining method, is assessed by compar...

journal_title：PeerJ

authors： Hills RD Jr

更新日期：2018-01-10 00:00:00

abstract：:Long-term streamflow datasets inevitably include gaps, which must be filled to allow estimates of runoff and ultimately catchment water budgets. Uncertainty introduced by filling gaps in discharge records is rarely, if ever, reported. We characterized the uncertainty due to streamflow gaps in a reference watershed at ...

journal_title：PeerJ

authors： See CR,Green MB,Yanai RD,Bailey AS,Campbell JL,Hayward J

更新日期：2020-07-21 00:00:00

abstract：Background:Electrochemical signals play an important role in cell communication and behavior. Electrically charged ions transported across cell membranes maintain an electrochemical imbalance that gives rise to bioelectric signaling, called membrane potential or Vmem. Vmem plays a key role in numerous inter- and intrac...

journal_title：PeerJ

authors： Bhavsar MB,Cato G,Hauschild A,Leppik L,Costa Oliveira KM,Eischen-Loges MJ,Barker JH

更新日期：2019-02-08 00:00:00

abstract：:The fates of genetic polymorphisms maintained by balancing selection depend on evolutionary dynamics at linked sites. While coevolution across linked, epigenetically-interacting loci has been extensively explored, such supergenes may be relatively rare. However, genes harboring adaptive variation can occur in close ph...

journal_title：PeerJ

authors： Tennessen JA

更新日期：2018-06-28 00:00:00

abstract：:Trans-acting small interfering RNAs (ta-siRNAs) are transcribed from protein non-coding genomic TAS loci and belong to a plant-specific class of endogenous small RNAs. These siRNAs have been found to regulate gene expression in most taxa including seed plants, gymnosperms, ferns and mosses. In this study, bioinformati...

journal_title：PeerJ

authors： Morozov SY,Milyutina IA,Erokhina TN,Ozerova LV,Troitsky AV,Solovyev AG

更新日期：2018-04-16 00:00:00

abstract：:Bioluminescent reporter genes, such as those from fireflies and bacteria, let researchers use light production as a non-invasive and non-destructive surrogate measure of microbial numbers in a wide variety of environments. As bioluminescence needs microbial metabolites, tagging microorganisms with luciferases means on...

journal_title：PeerJ

authors： Read HM,Mills G,Johnson S,Tsai P,Dalton J,Barquist L,Print CG,Patrick WM,Wiles S

更新日期：2016-06-22 00:00:00

abstract：:Haasgat is a primate-rich fossil locality in the northeastern part of the Fossil Hominid Sites of South Africa UNESCO World Heritage Site. Here we report the first hominin identified from Haasgat, a partial maxillary molar (HGT 500), that was recovered from an ex situ calcified sediment block sampled from the locality...

journal_title：PeerJ

authors： Leece AB,Kegley AD,Lacruz RS,Herries AI,Hemingway J,Kgasi L,Potze S,Adams JW

更新日期：2016-05-11 00:00:00

abstract：:The Pomacentridae (damselfish) and Apogonidae (cardinalfish) are among the most common fish families on coral reefs and in the aquarium trade. Members of both families undergo a pelagic larvae phase prior to settlement on the reef, where adults play key roles in benthic habitat structuring and trophic interactions. Fi...

journal_title：PeerJ

authors： Parris DJ,Brooker RM,Morgan MA,Dixson DL,Stewart FJ

更新日期：2016-08-31 00:00:00

abstract：:Gammaherpesviruses (GHVs) are host specific DNA viruses that infect a large range of mammalian species. These viruses preferentially target host lymphocyte cell populations and infection may lead to morbidity or mortality in immunocompromised, co-infected, or non-adapted hosts. In this study, we tested for the presenc...

journal_title：PeerJ

authors： Loisel DA,Troyer RM,VandeWoude S

更新日期：2018-06-22 00:00:00