Single nucleotide polymorphisms in the mitochondrial displacement loop and age-at-onset of renal cell carcinoma.

Abstract:

:The accumulation of single nucleotide polymorphisms (SNPs) in the displacement loop (D-loop) of mitochondrial DNA (mtDNA) has been described in various types of cancers, and their association with cancer risk and disease outcome has been extensively identified. In the present study, we investigated the association between age-at-onset and SNPs in the mitochondrial D-loop using a population-based series of renal cell carcinoma(RCC). The SNP sites of nucleotides 16293A/G were identified for their association with age-at-onset using the log-rank test. The age-at-onset of patients with the minor allele G genotype was significantly lower than that of patients with the A genotype at the 16293 site (p < 0.001). Genetic polymorphisms in the D-loop are predictive markers of age-at-onset in RCC patients. Accordingly, the analysis of genetic polymorphisms in the mitochondrial D-loop may help identify RCC patient subgroups at high risk of early onset.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Xu J,Guo Z,Zhang J,Cui L,Zhang S,Bai Y

doi

10.1038/srep02408

subject

Has Abstract

pub_date

2013-01-01 00:00:00

pages

2408

issn

2045-2322

pii

srep02408

journal_volume

3

pub_type

杂志文章
  • Psychological Profile in Coronary Artery By-Pass Graft Patients vs. Valve Replacement Patients Entering Cardiac Rehabilitation after Surgery.

    abstract::Anxiety and depression are thought to influence the genesis of ischemic diseases and not of valvular diseases, but little is known on the psychological profile of cardiac patients after surgery. Aim of this study was to investigate differences in disease experience and mood between patients undergoing cardiac rehabili...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-32696-5

    authors: Modica M,Castiglioni P,Minotti A,Faini A,Racca V,Ferratini M

    更新日期:2018-09-26 00:00:00

  • Quantitative Investigation into the influence of intravenous fluids on human immune and cancer cell lines.

    abstract::The effect of intravenous fluids (IVF) has been investigated clinically through the assessment of post-treatment reactions. However, the responses to IVF vary from patient-to-patient. It is important to understand the response of IVF treatment to be able to provide optimal IVF care. Herein, we investigated the impact ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-61296-5

    authors: Karamahmutoglu H,Altay A,Vural S,Elitas M

    更新日期:2020-07-16 00:00:00

  • Giant proximity effect in single-crystalline MgB2 bilayers.

    abstract::Although giant proximity effect (GPE) can shed important information on understanding superconducting pairing mechanisms and superconducting electronics, reports on the GPE are few because the fabrication of the junctions with GPE is technologically difficult. Here, we report a GPE in the single-crystalline MgB2 bilay...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-40263-9

    authors: Jung SG,Pham D,Park TH,Choi HY,Seo JW,Kang WN,Park T

    更新日期:2019-03-01 00:00:00

  • Aerosol mixing state matters for particles deposition in human respiratory system.

    abstract::Aerosol particles emitted from various human activities deteriorate air quality and are suggested to increase public health risk. Numerous studies have emphasized the relationship between the mass and/or number concentration of aerosols (or commonly known as particulate matter (PM)) in the atmosphere and the incidence...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-27156-z

    authors: Ching J,Kajino M

    更新日期:2018-06-11 00:00:00

  • Probing the Inhibition of Microtubule Affinity Regulating Kinase 4 by N-Substituted Acridones.

    abstract::Microtubule affinity regulating kinase 4 (MARK4) becomes a unique anti-cancer drug target as its overexpression is responsible for different types of cancers. In quest of novel, effective MARK4 inhibitors, some acridone derivatives were synthesized, characterized and evaluated for inhibitory activity against human MAR...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-38217-8

    authors: Voura M,Khan P,Thysiadis S,Katsamakas S,Queen A,Hasan GM,Ali S,Sarli V,Hassan MI

    更新日期:2019-02-08 00:00:00

  • Nucleotide lipid-based hydrogel as a new biomaterial ink for biofabrication.

    abstract::One of the greatest challenges in the field of biofabrication remains the discovery of suitable bioinks that satisfy physicochemical and biological requirements. Despite recent advances in tissue engineering and biofabrication, progress has been limited to the development of technologies using polymer-based materials....

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-59632-w

    authors: Dessane B,Smirani R,Bouguéon G,Kauss T,Ribot E,Devillard R,Barthélémy P,Naveau A,Crauste-Manciet S

    更新日期:2020-02-18 00:00:00

  • Frequency-resolved optical gating technique for retrieving the amplitude of a vibrational wavepacket.

    abstract::We propose a novel method to determine the complex amplitude of each eigenfunction composing a vibrational wavepacket of / molecular ions evolving with a ~10 fs time scale. We find that the two-dimensional spectrogram of the kinetic energy release (KER) of H(+)/D(+) fragments plotted against the time delay of the prob...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep11366

    authors: Nabekawa Y,Furukawa Y,Okino T,Amani Eilanlou A,Takahashi EJ,Yamanouchi K,Midorikawa K

    更新日期:2015-06-12 00:00:00

  • The dynamic mechanism of noisy signal decoding in gene regulation.

    abstract::Experimental evidence supports that signaling pathways can induce different dynamics of transcription factor (TF) activation, but how an input signal is encoded by such a dynamic, noisy TF and further decoded by downstream genes remains largely unclear. Here, using a system of stochastic transcription with signal regu...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep42128

    authors: Liu P,Wang H,Huang L,Zhou T

    更新日期:2017-02-08 00:00:00

  • Giant Two-photon Absorption in Circular Graphene Quantum Dots in Infrared Region.

    abstract::We investigate theoretically the two-photon absorption (TPA) for circular graphene quantum dots (GQDs) with the edge of armchair and zigzag on the basis of electronic energy states obtained by solving the Dirac-Weyl equation numerically under finite difference method. The expressions for TPA cross section are derived ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep33260

    authors: Feng X,Li Z,Li X,Liu Y

    更新日期:2016-09-15 00:00:00

  • Computational redesign of the Escherichia coli ribose-binding protein ligand binding pocket for 1,3-cyclohexanediol and cyclohexanol.

    abstract::Bacterial periplasmic-binding proteins have been acclaimed as general biosensing platform, but their range of natural ligands is too limited for optimal development of chemical compound detection. Computational redesign of the ligand-binding pocket of periplasmic-binding proteins may yield variants with new properties...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-53507-5

    authors: Tavares D,Reimer A,Roy S,Joublin A,Sentchilo V,van der Meer JR

    更新日期:2019-11-15 00:00:00

  • Effects of biotin on promoting anammox bacterial activity.

    abstract::Anaerobic ammonium oxidation (anammox) bacteria significantly improve the efficiency and reduce cost of nitrogen removal in wastewater treatment plants. However, their slow growth and vulnerable activity limit the application of anammox technology. In this paper, the enhancement of biotin on the nitrogen removal activ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-021-81738-y

    authors: Li Q,Chen J,Liu GH,Xu X,Zhang Q,Wang Y,Yuan J,Li Y,Qi L,Wang H

    更新日期:2021-01-21 00:00:00

  • Enhancement of guinea pig cytomegalovirus infection by two endogenously expressed components of the pentameric glycoprotein complex in epithelial cells.

    abstract::A better understanding of the mechanisms underlying cell tropisms and the efficiency of viral infection is critical for the development of vaccines and antiviral drugs for viral diseases. In this study, we worked on the entry mechanisms of guinea pig cytomegalovirus and found that endogenous expression of a combinatio...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-65545-5

    authors: Okumura M,Matsuura-Miura M,Makino R,Miura T,Noguchi K,Majima R,Koshizuka T,Inoue N

    更新日期:2020-05-22 00:00:00

  • Framework-flexibility driven selective sorption of p-xylene over other isomers by a dynamic metal-organic framework.

    abstract::Chemical separation has great importance in industrial applications. Separation of xylene isomers still prevails to be one of the most important challenges in chemical industry, due to the large amount of commercial use of p-xylene in the production of beverage bottles, fibers and films. A novel Zn(II)-based dynamic c...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep05761

    authors: Mukherjee S,Joarder B,Manna B,Desai AV,Chaudhari AK,Ghosh SK

    更新日期:2014-07-21 00:00:00

  • Mechanistic Insights into β-Lactamase-Catalysed Carbapenem Degradation Through Product Characterisation.

    abstract::β-Lactamases are a major threat to the clinical use of carbapenems, which are often antibiotics of last resort. Despite this, the reaction outcomes and mechanisms by which β-lactamases degrade carbapenems are still not fully understood. The carbapenem bicyclic core consists of a β-lactam ring fused to a pyrroline ring...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-49264-0

    authors: Lohans CT,Freeman EI,Groesen EV,Tooke CL,Hinchliffe P,Spencer J,Brem J,Schofield CJ

    更新日期:2019-09-20 00:00:00

  • Author Correction: Summertime Primary and Secondary Contributions to Southern Ocean Cloud Condensation Nuclei.

    abstract::A correction to this article has been published and is linked from the HTML and PDF versions of this paper. The error has been fixed in the paper. ...

    journal_title:Scientific reports

    pub_type: 已发布勘误

    doi:10.1038/s41598-019-46788-3

    authors: Fossum KN,Ovadnevaite J,Ceburnis D,Dall'Osto M,Marullo S,Bellacicco M,Simó R,Liu D,Flynn M,Zuend A,O'Dowd C

    更新日期:2019-07-18 00:00:00

  • Thioesterase YbgC affects motility by modulating c-di-GMP levels in Shewanella oneidensis.

    abstract::Because of ubiquity of thioesters, thioesterases play a critical role in metabolism, membrane biosynthesis, signal transduction, and gene regulation. In many bacteria, YbgC is such an enzyme, whose coding gene mostly resides in the tol-pal cluster. Although all other proteins encoded in the tol-pal cluster are clearly...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-04285-5

    authors: Gao T,Meng Q,Gao H

    更新日期:2017-06-21 00:00:00

  • Zn uptake behavior of rice genotypes and its implication on grain Zn biofortification.

    abstract::Understanding Zn uptake dynamics is critical to rice grain Zn biofortification. Here we examined soil Zn availability and Zn uptake pathways as affected by genotype (high-grain Zn varieties IR69428 and IR68144), Zn fertilization and water management in two pot experiments. Results showed significant interactions (P < ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep38301

    authors: Johnson-Beebout SE,Goloran JB,Rubianes FH,Jacob JD,Castillo OB

    更新日期:2016-12-02 00:00:00

  • Food knowledge depends upon the integrity of both sensory and functional properties: a VBM, TBSS and DTI tractography study.

    abstract::Food constitutes a fuel of life for human beings. It is therefore of chief importance that their recognition system readily identifies the most relevant properties of food by drawing on semantic memory. One of the most relevant properties to be considered is the level of processing impressed by humans on food. We hypo...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-43919-8

    authors: Vignando M,Aiello M,Rinaldi A,Cattarruzza T,Mazzon G,Manganotti P,Eleopra R,Rumiati RI

    更新日期:2019-05-15 00:00:00

  • Age of Complementary Foods Introduction and Risk of Anemia in Children Aged 4-6 years: A Prospective Birth Cohort in China.

    abstract::Age of complementary foods introduction is associated with childhood anemia, but the ideal age for the introduction of complementary foods to infants is a continuing topic of debate. We examined the longitudinal association between complementary foods introduction age and risk of anemia in 18,446 children from the Jia...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep44726

    authors: Wang F,Liu H,Wan Y,Li J,Chen Y,Zheng J,Huang T,Li D

    更新日期:2017-03-23 00:00:00

  • Structure and distribution of chalky deposits in the Pacific oyster using x-ray computed tomography (CT).

    abstract::Oysters are unusual among bivalves in that they possess chambers, often filled with soft, chalky calcite, that are irregularly scattered throughout the shell. Because the function of these so-called chalky deposits is still unclear, evaluating the growth and distribution of chalk is important for elucidating the ecolo...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-68726-4

    authors: Banker RMW,Sumner DY

    更新日期:2020-07-21 00:00:00

  • Targeted analysis of polymorphic loci from low-coverage shotgun sequence data allows accurate genotyping of HLA genes in historical human populations.

    abstract::The highly polymorphic human leukocyte antigen (HLA) plays a crucial role in adaptive immunity and is associated with various complex diseases. Accurate analysis of HLA genes using ancient DNA (aDNA) data is crucial for understanding their role in human adaptation to pathogens. Here, we describe the TARGT pipeline for...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-64312-w

    authors: Pierini F,Nutsua M,Böhme L,Özer O,Bonczarowska J,Susat J,Franke A,Nebel A,Krause-Kyora B,Lenz TL

    更新日期:2020-04-30 00:00:00

  • DSF Guided Refolding As A Novel Method Of Protein Production.

    abstract::The Anfinsen hypothesis, the demonstration of which led to the Nobel prize in Chemistry, posits that all information required to determine a proteins' three dimensional structure is contained within its amino acid sequence. This suggests that it should be possible, in theory, to fold any protein in vitro. In practice,...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep18906

    authors: Biter AB,de la Peña AH,Thapar R,Lin JZ,Phillips KJ

    更新日期:2016-01-19 00:00:00

  • Non-invasive visualization of physiological changes of insects during metamorphosis based on biophoton emission imaging.

    abstract::Spontaneous ultra-weak photon emission from living organisms, designated as biophoton emission, is a generally observed phenomenon irrespective of the organism species. Biophoton emission is attributed to the production of excited molecules in a metabolic biochemical reaction, especially in processes involving reactiv...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-45007-3

    authors: Usui S,Tada M,Kobayashi M

    更新日期:2019-06-12 00:00:00

  • Vascularised endosteal bone tissue in armoured sauropod dinosaurs.

    abstract::The presence of well-vascularised, endosteal bone in the medullary region of long bones of nonavian dinosaurs has been invoked as being homologous to medullary bone, a specialised bone tissue formed during ovulation in birds. However, similar bone tissues can result as a pathological response in modern birds and in no...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep24858

    authors: Chinsamy A,Cerda I,Powell J

    更新日期:2016-04-26 00:00:00

  • A novel mechanism of plasminogen activation in epithelial and mesenchymal cells.

    abstract::Cancer dissemination is initiated by the movement of cells into the vasculature which has been reported to be triggered by EMT (epithelial to mesenchymal transition). Cellular dissemination also requires proteases that remodel the extracellular matrix. The protease, plasmin is a prominent player in matrix remodeling a...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-32433-y

    authors: Bydoun M,Sterea A,Weaver ICG,Bharadwaj AG,Waisman DM

    更新日期:2018-09-20 00:00:00

  • Effects of the non-parabolic kinetic energy on non-equilibrium polariton condensates.

    abstract::In the study of non-equilibrium polariton condensates it is usually assumed that the dispersion relation of polaritons is parabolic in nature. We show that considering the true non-parabolic kinetic energy of polaritons leads to significant changes in the behaviour of the condensate due to the curvature of the dispers...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-01113-8

    authors: Pinsker F,Ruan X,Alexander TJ

    更新日期:2017-05-15 00:00:00

  • Initiation of programmed cell death in the suspensor is predominantly regulated maternally in a tobacco hybrid.

    abstract::Maternal gene products deposited in the egg regulate early embryogenesis before activation of the embryonic genome in animals. While in higher plants, it is believed that genes of parental origin contribute to early embryogenesis. However, little is known regarding the particular processes in which genes of parental o...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep29467

    authors: Luo A,Zhao P,Zhang LY,Sun MX

    更新日期:2016-07-19 00:00:00

  • Expression and replication of virus-like circular DNA in human cells.

    abstract::The consumption of bovine milk and meat is considered a risk factor for colon- and breast cancer formation, and milk consumption has also been implicated in an increased risk for developing Multiple Sclerosis (MS). A number of highly related virus-like DNAs have been recently isolated from bovine milk and sera and fro...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-21317-w

    authors: Eilebrecht S,Hotz-Wagenblatt A,Sarachaga V,Burk A,Falida K,Chakraborty D,Nikitina E,Tessmer C,Whitley C,Sauerland C,Gunst K,Grewe I,Bund T

    更新日期:2018-02-12 00:00:00

  • Analysis of alternative splicing events for cancer diagnosis using a multiplexing nanophotonic biosensor.

    abstract::Personalized medicine is a promising tool not only for prevention, screening and development of more efficient treatment strategies, but also for diminishing the side effects caused by current therapies. Deciphering gene regulation pathways provides a reliable prognostic analysis to elucidate the origin of grave disea...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep41368

    authors: Huertas CS,Domínguez-Zotes S,Lechuga LM

    更新日期:2017-01-25 00:00:00

  • Plasmonically Enhanced Schottky Photovoltaic Devices.

    abstract::Solar-cells based on Schottky junctions between metals and semiconductors (without or with an intermediate insulator) are among the main possibilities towards economical photovoltaic conversion of the solar energy. This is mainly due to their structural simplicity and hence the ease of their realization. We propose he...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-14528-0

    authors: Farhat M,Kais S,Alharbi FH

    更新日期:2017-10-27 00:00:00