Motion artifacts in functional near-infrared spectroscopy: a comparison of motion correction techniques applied to real cognitive data.

Abstract:

:Motion artifacts are a significant source of noise in many functional near-infrared spectroscopy (fNIRS) experiments. Despite this, there is no well-established method for their removal. Instead, functional trials of fNIRS data containing a motion artifact are often rejected completely. However, in most experimental circumstances the number of trials is limited, and multiple motion artifacts are common, particularly in challenging populations. Many methods have been proposed recently to correct for motion artifacts, including principle component analysis, spline interpolation, Kalman filtering, wavelet filtering and correlation-based signal improvement. The performance of different techniques has been often compared in simulations, but only rarely has it been assessed on real functional data. Here, we compare the performance of these motion correction techniques on real functional data acquired during a cognitive task, which required the participant to speak aloud, leading to a low-frequency, low-amplitude motion artifact that is correlated with the hemodynamic response. To compare the efficacy of these methods, objective metrics related to the physiology of the hemodynamic response have been derived. Our results show that it is always better to correct for motion artifacts than reject trials, and that wavelet filtering is the most effective approach to correcting this type of artifact, reducing the area under the curve where the artifact is present in 93% of the cases. Our results therefore support previous studies that have shown wavelet filtering to be the most promising and powerful technique for the correction of motion artifacts in fNIRS data. The analyses performed here can serve as a guide for others to objectively test the impact of different motion correction algorithms and therefore select the most appropriate for the analysis of their own fNIRS experiment.

journal_name

Neuroimage

journal_title

NeuroImage

authors

Brigadoi S,Ceccherini L,Cutini S,Scarpa F,Scatturin P,Selb J,Gagnon L,Boas DA,Cooper RJ

doi

10.1016/j.neuroimage.2013.04.082

subject

Has Abstract

pub_date

2014-01-15 00:00:00

pages

181-91

eissn

1053-8119

issn

1095-9572

pii

S1053-8119(13)00429-1

journal_volume

85 Pt 1

pub_type

杂志文章
  • Real-time fMRI neurofeedback training to improve eating behavior by self-regulation of the dorsolateral prefrontal cortex: A randomized controlled trial in overweight and obese subjects.

    abstract::Obesity is associated with altered responses to food stimuli in prefrontal brain networks that mediate inhibitory control of ingestive behavior. In particular, activity of the dorsolateral prefrontal cortex (dlPFC) is reduced in obese compared to normal-weight subjects and has been linked to the success of weight-loss...

    journal_title:NeuroImage

    pub_type: 杂志文章,随机对照试验

    doi:10.1016/j.neuroimage.2019.02.033

    authors: Kohl SH,Veit R,Spetter MS,Günther A,Rina A,Lührs M,Birbaumer N,Preissl H,Hallschmid M

    更新日期:2019-05-01 00:00:00

  • Clinical fMRI: evidence for a 7T benefit over 3T.

    abstract::Despite there being an increasing number of installations of ultra high field MR systems (>3T) in clinical environments, no functional patient investigations have yet examined possible benefits for functional diagnostics. Here we performed presurgical localization of the primary motor hand area on 3T and 7T Siemens sc...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2011.05.010

    authors: Beisteiner R,Robinson S,Wurnig M,Hilbert M,Merksa K,Rath J,Höllinger I,Klinger N,Marosi Ch,Trattnig S,Geissler A

    更新日期:2011-08-01 00:00:00

  • Responsibility modulates pain-matrix activation elicited by the expressions of others in pain.

    abstract::Here we examine whether brain responses to dynamic facial expressions of pain are influenced by our responsibility for the observed pain. Participants played a flanker task with a confederate. Whenever either erred, the confederate was seen to receive a noxious shock. Using functional magnetic resonance imaging, we fo...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2015.03.034

    authors: Cui F,Abdelgabar AR,Keysers C,Gazzola V

    更新日期:2015-07-01 00:00:00

  • Functional MRI evidence for disparate developmental processes underlying intelligence in boys and girls.

    abstract::Previous research has shown evidence for sex differences in the neuroanatomical bases for intelligence in adults. Possible differences in the neuroanatomical correlates of intelligence and their developmental trajectories between boys and girls were investigated using functional MRI (fMRI). A large cohort of over 300 ...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2006.01.010

    authors: Schmithorst VJ,Holland SK

    更新日期:2006-07-01 00:00:00

  • White matter microstructural variability mediates the relation between obesity and cognition in healthy adults.

    abstract::Obesity has been linked with structural and functional brain changes. However, the impact of obesity on brain and cognition in aging remains debatable, especially for white matter. We therefore aimed to determine the effects of obesity on white matter microstructure and potential implications for cognition in a well-c...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2018.01.028

    authors: Zhang R,Beyer F,Lampe L,Luck T,Riedel-Heller SG,Loeffler M,Schroeter ML,Stumvoll M,Villringer A,Witte AV

    更新日期:2018-05-15 00:00:00

  • Effects of hunger, satiety and oral glucose on effective connectivity between hypothalamus and insular cortex.

    abstract::The hypothalamus and insular cortex play an essential role in the integration of endocrine and homeostatic signals and their impact on food intake. Resting-state functional connectivity alterations of the hypothalamus, posterior insula (PINS) and anterior insula (AINS) are modulated by metabolic states and caloric int...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2020.116931

    authors: Al-Zubaidi A,Iglesias S,Stephan KE,Buades-Rotger M,Heldmann M,Nolde JM,Kirchner H,Mertins A,Jauch-Chara K,Münte TF

    更新日期:2020-08-15 00:00:00

  • Investigating white matter fibre density and morphology using fixel-based analysis.

    abstract::Voxel-based analysis of diffusion MRI data is increasingly popular. However, most white matter voxels contain contributions from multiple fibre populations (often referred to as crossing fibres), and therefore voxel-averaged quantitative measures (e.g. fractional anisotropy) are not fibre-specific and have poor interp...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2016.09.029

    authors: Raffelt DA,Tournier JD,Smith RE,Vaughan DN,Jackson G,Ridgway GR,Connelly A

    更新日期:2017-01-01 00:00:00

  • Prediction of individual season of birth using MRI.

    abstract::Previous research suggests statistical associations between season of birth (SOB) with prevalence of neurobehavioral disorders such as schizophrenia and bipolar disorder, personality traits such as novelty and sensation seeking, and suicidal behavior. These effects are thought to be mediated by seasonal differences in...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2013.11.011

    authors: Pantazatos SP

    更新日期:2014-03-01 00:00:00

  • Effective connectivity during haptic perception: a study using Granger causality analysis of functional magnetic resonance imaging data.

    abstract::Although it is accepted that visual cortical areas are recruited during touch, it remains uncertain whether this depends on top-down inputs mediating visual imagery or engagement of modality-independent representations by bottom-up somatosensory inputs. Here we addressed this by examining effective connectivity in hum...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2008.01.044

    authors: Deshpande G,Hu X,Stilla R,Sathian K

    更新日期:2008-05-01 00:00:00

  • Developmental stages and sex differences of white matter and behavioral development through adolescence: a longitudinal diffusion tensor imaging (DTI) study.

    abstract::White matter (WM) continues to mature through adolescence in parallel with gains in cognitive ability. To date, developmental changes in human WM microstructure have been inferred using analyses of cross-sectional or two time-point follow-up studies, limiting our understanding of individual developmental trajectories....

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2013.12.044

    authors: Simmonds DJ,Hallquist MN,Asato M,Luna B

    更新日期:2014-05-15 00:00:00

  • A graphical model for estimating stimulus-evoked brain responses from magnetoencephalography data with large background brain activity.

    abstract::This paper formulates a novel probabilistic graphical model for noisy stimulus-evoked MEG and EEG sensor data obtained in the presence of large background brain activity. The model describes the observed data in terms of unobserved evoked and background factors with additive sensor noise. We present an expectation max...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2005.09.055

    authors: Nagarajan SS,Attias HT,Hild KE 2nd,Sekihara K

    更新日期:2006-04-01 00:00:00

  • Neural correlates of experimentally induced flow experiences.

    abstract::Flow refers to a positive, activity-associated, subjective experience under conditions of a perceived fit between skills and task demands. Using functional magnetic resonance perfusion imaging, we investigated the neural correlates of flow in a sample of 27 human subjects. Experimentally, in the flow condition partici...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2013.08.019

    authors: Ulrich M,Keller J,Hoenig K,Waller C,Grön G

    更新日期:2014-02-01 00:00:00

  • Characterizing Inscapes and resting-state in MEG: Effects in typical and atypical development.

    abstract::Examining the brain at rest is a powerful approach used to understand the intrinsic properties of typical and disordered human brain function, yet task-free paradigms are associated with greater head motion, particularly in young and/or clinical populations such as autism spectrum disorder (ASD) and attention-deficit/...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2020.117524

    authors: Vandewouw MM,Dunkley BT,Lerch JP,Anagnostou E,Taylor MJ

    更新日期:2021-01-15 00:00:00

  • Construction of a consistent high-definition spatio-temporal atlas of the developing brain using adaptive kernel regression.

    abstract::Medical imaging has shown that, during early development, the brain undergoes more changes in size, shape and appearance than at any other time in life. A better understanding of brain development requires a spatio-temporal atlas that characterizes the dynamic changes during this period. In this paper we present an ap...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2011.09.062

    authors: Serag A,Aljabar P,Ball G,Counsell SJ,Boardman JP,Rutherford MA,Edwards AD,Hajnal JV,Rueckert D

    更新日期:2012-02-01 00:00:00

  • Dissociable roles of the bilateral anterior temporal lobe in face-name associations: an event-related fMRI study.

    abstract::Previous studies have suggested the importance of bilateral anterior temporal regions in face-name associations, but there is little evidence concerning their precise role. In this fMRI study, we investigated the effects of person-related semantics (PS) and repeated learning (R) on activations in these regions during ...

    journal_title:NeuroImage

    pub_type: 临床试验,杂志文章

    doi:10.1016/j.neuroimage.2005.09.043

    authors: Tsukiura T,Mochizuki-Kawai H,Fujii T

    更新日期:2006-04-01 00:00:00

  • Multi-atlas based segmentation of brain images: atlas selection and its effect on accuracy.

    abstract::Quantitative research in neuroimaging often relies on anatomical segmentation of human brain MR images. Recent multi-atlas based approaches provide highly accurate structural segmentations of the brain by propagating manual delineations from multiple atlases in a database to a query subject and combining them. The atl...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2009.02.018

    authors: Aljabar P,Heckemann RA,Hammers A,Hajnal JV,Rueckert D

    更新日期:2009-07-01 00:00:00

  • Oxytocin receptor gene and racial ingroup bias in empathy-related brain activity.

    abstract::The human brain responds more strongly to racial ingroup than outgroup individuals' pain. This racial ingroup bias varies across individuals and has been attributed to social experiences. What remains unknown is whether the racial ingroup bias in brain activity is associated with a genetic polymorphism. We investigate...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2015.01.042

    authors: Luo S,Li B,Ma Y,Zhang W,Rao Y,Han S

    更新日期:2015-04-15 00:00:00

  • The optimal template effect in hippocampus studies of diseased populations.

    abstract::We evaluate the impact of template choice on template-based segmentation of the hippocampus in epilepsy. Four dataset-specific strategies are quantitatively contrasted: the "closest to average" individual template, the average shape version of the closest to average template, a best appearance template and the best ap...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2009.09.062

    authors: Avants BB,Yushkevich P,Pluta J,Minkoff D,Korczykowski M,Detre J,Gee JC

    更新日期:2010-02-01 00:00:00

  • Decoding the direction of auditory motion in blind humans.

    abstract::Accurate processing of nonvisual stimuli is fundamental to humans with visual impairments. In this population, moving sounds activate an occipito-temporal region thought to encompass the equivalent of monkey area MT+, but it remains unclear whether the signal carries information beyond the mere presence of motion. To ...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2010.04.266

    authors: Wolbers T,Zahorik P,Giudice NA

    更新日期:2011-05-15 00:00:00

  • Evidence for abnormalities of cortical development in adolescent-onset schizophrenia.

    abstract::Voxel-Based Morphometry (VBM) identifies differences in grey matter brain structure in patients with schizophrenia relative to healthy controls, with particularly prominent differences found in patients with the more severe, adolescent-onset form of the disease. However, as VBM is sensitive to a combination of changes...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2008.08.013

    authors: Voets NL,Hough MG,Douaud G,Matthews PM,James A,Winmill L,Webster P,Smith S

    更新日期:2008-12-01 00:00:00

  • Toward a comprehensive understanding of the neural mechanisms of decoded neurofeedback.

    abstract::Real-time functional magnetic resonance imaging (fMRI) neurofeedback is an experimental framework in which fMRI signals are presented to participants in a real-time manner to change their behaviors. Changes in behaviors after real-time fMRI neurofeedback are postulated to be caused by neural plasticity driven by the i...

    journal_title:NeuroImage

    pub_type: 杂志文章,评审

    doi:10.1016/j.neuroimage.2018.12.022

    authors: Shibata K,Lisi G,Cortese A,Watanabe T,Sasaki Y,Kawato M

    更新日期:2019-03-01 00:00:00

  • Comparison of spatial normalization strategies of diffusion MRI data for studying motor outcome in subacute-chronic and acute stroke.

    abstract::A common means of studying motor recovery in stroke patients is to extract Diffusion Tensor Imaging (DTI) parameters from the corticospinal tract (CST) and correlate them with clinical outcome scores. To that purpose, conducting group-level analyses through spatial normalization has become a popular approach. However,...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2018.08.002

    authors: Moulton E,Valabregue R,Díaz B,Kemlin C,Leder S,Lehéricy S,Samson Y,Rosso C

    更新日期:2018-12-01 00:00:00

  • Effects of noise from functional magnetic resonance imaging on auditory event-related potentials in working memory task.

    abstract::The effects of functional magnetic resonance imaging (fMRI) acoustic noise were investigated on the parameters of event-related responses (ERPs) elicited during auditory matching-to-sample location and pitch working memory tasks. Stimuli were tones with varying location (left or right) and frequency (high or low). Sub...

    journal_title:NeuroImage

    pub_type: 临床试验,杂志文章

    doi:10.1016/S1053-8119(03)00390-2

    authors: Novitski N,Anourova I,Martinkauppi S,Aronen HJ,Näätänen R,Carlson S

    更新日期:2003-10-01 00:00:00

  • Problem solving, working memory, and motor correlates of association and commissural fiber bundles in normal aging: a quantitative fiber tracking study.

    abstract::Normal aging is accompanied by decline in selective cognitive and motor functions. A concurrent decline in regional white matter integrity, detectable with diffusion tensor imaging (DTI), potentially contributes to waning function. DTI analysis of white matter loci indicates an anterior-to-posterior gradient distribut...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2008.09.046

    authors: Zahr NM,Rohlfing T,Pfefferbaum A,Sullivan EV

    更新日期:2009-02-01 00:00:00

  • Morphology-based hypothesis testing in discrete random fields: a non-parametric method to address the multiple-comparison problem in neuroimaging.

    abstract::A new method for detecting activations in random fields, which may be useful for addressing the issue of multiple comparisons in neuroimaging, is presented. This method is based on some constructs of mathematical morphology - specifically, morphological erosions and dilations - that enable the detection of active regi...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2011.03.081

    authors: Marroquin JL,Biscay RJ,Ruiz-Correa S,Alba A,Ramirez R,Armony JL

    更新日期:2011-06-15 00:00:00

  • The EEG correlates of the TMS-induced EMG silent period in humans.

    abstract::Application of magnetic or electrical stimulation to the motor cortex can result in a period of electromyography (EMG) silence in a tonically active peripheral muscle. This period of EMG silence is referred to as the silent period (SP). The duration of SP shows intersubject variability and reflects the integrity of co...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2013.06.059

    authors: Farzan F,Barr MS,Hoppenbrouwers SS,Fitzgerald PB,Chen R,Pascual-Leone A,Daskalakis ZJ

    更新日期:2013-12-01 00:00:00

  • Using a white matter reference to remove the dependency of global signal on experimental conditions in SPECT analyses.

    abstract::Proportional scaling models are often used in functional imaging studies to remove confounding of local signals by global effects. It is generally assumed that global effects are uncorrelated with experimental conditions. However, when the global effect is estimated by the global signal, defined as the intracerebral a...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2006.03.025

    authors: Spence JS,Carmack PS,Gunst RF,Schucany WR,Woodward WA,Haley RW

    更新日期:2006-08-01 00:00:00

  • Reward circuitry is perturbed in the absence of the serotonin transporter.

    abstract::The serotonin transporter (SERT) modulates the entire serotonergic system in the brain and influences both the dopaminergic and norepinephrinergic systems. These three systems are intimately involved in normal physiological functioning of the brain and implicated in numerous pathological conditions. Here we use high-r...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2009.03.026

    authors: Bearer EL,Zhang X,Janvelyan D,Boulat B,Jacobs RE

    更新日期:2009-07-15 00:00:00

  • A generalised framework for super-resolution track-weighted imaging.

    abstract::Track-density imaging (TDI) was recently introduced as a method to achieve super-resolution imaging using whole-brain fibre-tracking data (the so called tractogram). A similar approach to achieve super-resolution was later applied for average pathlength mapping (APM). These two methods have in common that the tractogr...

    journal_title:NeuroImage

    pub_type: 杂志文章

    doi:10.1016/j.neuroimage.2011.08.099

    authors: Calamante F,Tournier JD,Smith RE,Connelly A

    更新日期:2012-02-01 00:00:00

  • Real-time fMRI and its application to neurofeedback.

    abstract::Real-time fMRI (rtfMRI) allows immediate access to experimental results by analyzing data as fast as they are acquired. It was devised soon after the inception of fMRI and has undergone a rapid development since then. The availability of results during the ongoing experiment facilitates a variety of applications such ...

    journal_title:NeuroImage

    pub_type: 历史文章,杂志文章,评审

    doi:10.1016/j.neuroimage.2011.10.009

    authors: Weiskopf N

    更新日期:2012-08-15 00:00:00