Abstract：
:Structural information on interacting proteins is important for understanding life processes at the molecular level. Genome-wide docking database is an integrated resource for structural studies of protein-protein interactions on the genome scale, which combines the available experimental data with models obtained by docking techniques. Current database version (August 2009) contains 25 559 experimental and modeled 3D structures for 771 organisms spanned over the entire universe of life from viruses to humans. Data are organized in a relational database with user-friendly search interface allowing exploration of the database content by a number of parameters. Search results can be interactively previewed and downloaded as PDB-formatted files, along with the information relevant to the specified interactions. The resource is freely available at http://gwidd.bioinformatics.ku.edu.
journal_name
Nucleic Acids Resjournal_title
Nucleic acids researchauthors
Kundrotas PJ,Zhu Z,Vakser IAdoi
10.1093/nar/gkp944subject
Has Abstractpub_date
2010-01-01 00:00:00pages
D513-7issue
Database issueeissn
0305-1048issn
1362-4962pii
gkp944journal_volume
38pub_type
杂志文章abstract：:The history and mechanism of molecular evolution in DNA have been greatly elucidated by contributions from genetics, probability theory and bioinformatics--indeed, mathematical developments such as Kimura's neutral theory, Kingman's coalescent theory and efficient software such as BLAST, ClustalW, Phylip, etc., provid...
journal_title：Nucleic acids research
pub_type： 杂志文章
doi：10.1093/nar/gkp477
更新日期：2009-07-01 00:00:00
abstract：:As shown in the accompanying paper (5), the oligonucleotide composition of the E. coli genome is highly asymmetric for sequences up to 6 bp in length when ranked from highest to lowest abundance. We show here that this largely reflects codon usage because heavily used codons were found in the highly abundant oligomers...
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journal_title：Nucleic acids research
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journal_title：Nucleic acids research
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journal_title：Nucleic acids research
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journal_title：Nucleic acids research
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更新日期：2019-12-02 00:00:00
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journal_title：Nucleic acids research
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