Abstract:
:The human MHC represents the strongest susceptibility locus for autoimmune diseases. However, the identification of the true predisposing gene(s) has been handicapped by the strong linkage disequilibrium across the region. Furthermore, most studies to date have been limited to the examination of a subset of the HLA and non-HLA genes with a marker density and sample size insufficient for mapping all independent association signals. We genotyped a panel of 1,472 SNPs to capture the common genomic variation across the 3.44 megabase (Mb) classic MHC region in 10,576 DNA samples derived from patients with systemic lupus erythematosus, Crohn's disease, ulcerative colitis, rheumatoid arthritis, myasthenia gravis, selective IgA deficiency, multiple sclerosis, and appropriate control samples. We identified the primary association signals for each disease and performed conditional regression to identify independent secondary signals. The data demonstrate that MHC associations with autoimmune diseases result from complex, multilocus effects that span the entire region.
journal_name
Proc Natl Acad Sci U S Aauthors
International MHC and Autoimmunity Genetics Network.,Rioux JD,Goyette P,Vyse TJ,Hammarström L,Fernando MM,Green T,De Jager PL,Foisy S,Wang J,de Bakker PI,Leslie S,McVean G,Padyukov L,Alfredsson L,Annese V,Hafler DA,Pan-doi
10.1073/pnas.0909307106subject
Has Abstractpub_date
2009-11-03 00:00:00pages
18680-5issue
44eissn
0027-8424issn
1091-6490pii
0909307106journal_volume
106pub_type
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