Multi-substrate chromosome preparations for high throughput comparative FISH.

Abstract:

BACKGROUND:A modification of a standard method of fluorescence in situ hybridisation (FISH) is described, by which a combination of several substrates and probes on single microscope slides enables more accurate comparisons of the distribution and abundance of chromosomal sequences and improves the relatively low throughput of standard FISH methods. RESULTS:The utility and application of multi-colour, multi-substrate FISH is illustrated by the simultaneous physical mapping of retrotransposon sequences to three species of Avena, and single locus BAC (bacterial artificial chromosome) clones and rDNA probes to three species of Brachypodium, demonstrating how this would enable better understanding of complex phylogenetic relationships among some of the species belonging to these two genera. CONCLUSION:The results show that use of multi-substrate chromosome preparations significantly increases the utility of FISH in comparative analyses of the distribution and abundance of chromosomal sequences in closely related plant species.

journal_name

BMC Biotechnol

journal_title

BMC biotechnology

authors

Hasterok R,Dulawa J,Jenkins G,Leggett M,Langdon T

doi

10.1186/1472-6750-6-20

keywords:

subject

Has Abstract

pub_date

2006-03-20 00:00:00

pages

20

issn

1472-6750

pii

1472-6750-6-20

journal_volume

6

pub_type

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