Biosynthesis of a D-amino acid in peptide linkage by an enzyme from frog skin secretions.

Abstract:

:d-amino acids are present in some peptides from amphibian skin. These residues are derived from the corresponding L-amino acids present in the respective precursors. From skin secretions of Bombinae, we have isolated an enzyme that catalyzes the isomerization of an L-Ile in position 2 of a model peptide to D-allo-Ile. In the course of this reaction, which proceeds without the addition of a cofactor, radioactivity from tritiated water is incorporated into the second position of the product. The amino acid sequence of this isomerase could be deduced from cloned cDNA and genomic DNA. After expression of this cDNA in oocytes of Xenopus laevis, isomerase activity could be detected. Polypeptides related to the frog skin enzyme are present in several vertebrate species, including humans.

authors

Jilek A,Mollay C,Tippelt C,Grassi J,Mignogna G,Müllegger J,Sander V,Fehrer C,Barra D,Kreil G

doi

10.1073/pnas.0500789102

keywords:

subject

Has Abstract

pub_date

2005-03-22 00:00:00

pages

4235-9

issue

12

eissn

0027-8424

issn

1091-6490

pii

0500789102

journal_volume

102

pub_type

杂志文章
  • SUMO modification regulates inactivation of the voltage-gated potassium channel Kv1.5.

    abstract::The voltage-gated potassium (Kv) channel Kv1.5 mediates the I(Kur) repolarizing current in human atrial myocytes and regulates vascular tone in multiple peripheral vascular beds. Understanding the complex regulation of Kv1.5 function is of substantial interest because it represents a promising pharmacological target f...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0606702104

    authors: Benson MD,Li QJ,Kieckhafer K,Dudek D,Whorton MR,Sunahara RK,Iñiguez-Lluhí JA,Martens JR

    更新日期:2007-02-06 00:00:00

  • A theory of allelic and isotypic exclusion for immunoglobulin genes.

    abstract::Heavy (H) chain binding protein (BiP), which binds to free immunoglobulin H chain of the mu and gamma classes, can be demonstrated in pre-B-cells. It is proposed that the displacement of BiP from H chain by light (L) chain terminates the activity of the enzyme system, L-generase, which catalyzes DNA rearrangement at t...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.79.22.6976

    authors: Wabl M,Steinberg C

    更新日期:1982-11-01 00:00:00

  • Bipartite mRNA for chicken alpha-fibrinogen potentially encodes an amino acid sequence homologous to beta- and gamma-fibrinogens.

    abstract::Overlapping cDNAs derived from the chicken alpha-fibrinogen mRNA have been sequenced, beginning from within the coding region for the signal peptide of this subunit and terminating within the poly(A) extension. The predicted size of chicken alpha-fibrinogen is 54,187 daltons, which is the smallest of any alpha chain r...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.87.13.5198

    authors: Weissbach L,Grieninger G

    更新日期:1990-07-01 00:00:00

  • Effects of intracellular expression of anti-huntingtin antibodies of various specificities on mutant huntingtin aggregation and toxicity.

    abstract::We have generated eight mAbs (MW1-8) that bind the epitopes polyglutamine (polyQ), polyproline (polyP), or the C terminus of exon 1 in huntingtin (htt) protein. In the brains of Huntington's disease (HD) mouse models, the anti-polyQ mAbs bind to various cytoplasmic compartments, whereas the anti-polyP and anti-C termi...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.022631799

    authors: Khoshnan A,Ko J,Patterson PH

    更新日期:2002-01-22 00:00:00

  • Opposing effects of SWI/SNF and Mi-2/NuRD chromatin remodeling complexes on epigenetic reprogramming by EBF and Pax5.

    abstract::Transcriptionally silent genes are maintained in inaccessible chromatin. Accessibility of these genes requires their modification by chromatin remodeling complexes (CRCs), which are recruited to promoters by sequence-specific DNA-binding proteins. Early B-cell factor (EBF), which is crucial for B-cell lineage specific...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0809485106

    authors: Gao H,Lukin K,Ramírez J,Fields S,Lopez D,Hagman J

    更新日期:2009-07-07 00:00:00

  • Speaker gaze increases information coupling between infant and adult brains.

    abstract::When infants and adults communicate, they exchange social signals of availability and communicative intention such as eye gaze. Previous research indicates that when communication is successful, close temporal dependencies arise between adult speakers' and listeners' neural activity. However, it is not known whether s...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1702493114

    authors: Leong V,Byrne E,Clackson K,Georgieva S,Lam S,Wass S

    更新日期:2017-12-12 00:00:00

  • Synthetic gene-regulatory networks in the opportunistic human pathogen Streptococcus pneumoniae.

    abstract::Streptococcus pneumoniae can cause disease in various human tissues and organs, including the ear, the brain, the blood, and the lung, and thus in highly diverse and dynamic environments. It is challenging to study how pneumococci control virulence factor expression, because cues of natural environments and the presen...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1920015117

    authors: Sorg RA,Gallay C,Van Maele L,Sirard JC,Veening JW

    更新日期:2020-11-03 00:00:00

  • HLA-DR2 subtypes form an additional supertypic family of DR beta alleles.

    abstract::Homozygous lymphoblastoid cell lines representing Dw subtypes of the DR2 serotype were studied for structural polymorphism at DR beta. These subtypes included Dw2, Dw12, and non-Dw2/non-Dw12. Analysis by two-dimensional gel electrophoresis showed that two DR beta genes were expressed in each cell line studied. One of ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.84.13.4591

    authors: Lee BS,Rust NA,McMichael AJ,McDevitt HO

    更新日期:1987-07-01 00:00:00

  • As4S4 targets RING-type E3 ligase c-CBL to induce degradation of BCR-ABL in chronic myelogenous leukemia.

    abstract::Arsenic, a curative agent for acute promyelocytic leukemia, induces cell apoptosis and degradation of BCR-ABL in chronic myelogenous leukemia (CML). We demonstrated that ubiquitination and degradation of BCR-ABL was mediated by c-CBL, a RING-type E3 ligase that was also shown to be involved in ubiquitination for many ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1016311108

    authors: Mao JH,Sun XY,Liu JX,Zhang QY,Liu P,Huang QH,Li KK,Chen Q,Chen Z,Chen SJ

    更新日期:2010-12-14 00:00:00

  • Hydrophobic forces and the length limit of foldable protein domains.

    abstract::To find the native conformation (fold), proteins sample a subspace that is typically hundreds of orders of magnitude smaller than their full conformational space. Whether such fast folding is intrinsic or the result of natural selection, and what is the longest foldable protein, are open questions. Here, we derive the...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1207382109

    authors: Lin MM,Zewail AH

    更新日期:2012-06-19 00:00:00

  • The deep, hot biosphere: Twenty-five years of retrospection.

    abstract::Twenty-five years ago this month, Thomas Gold published a seminal manuscript suggesting the presence of a "deep, hot biosphere" in the Earth's crust. Since this publication, a considerable amount of attention has been given to the study of deep biospheres, their role in geochemical cycles, and their potential to infor...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1701266114

    authors: Colman DR,Poudel S,Stamps BW,Boyd ES,Spear JR

    更新日期:2017-07-03 00:00:00

  • Diacylglycerol promotes centrosome polarization in T cells via reciprocal localization of dynein and myosin II.

    abstract::Centrosome reorientation to the immunological synapse maintains the specificity of T-cell effector function by facilitating the directional release of cytokines and cytolytic factors toward the antigen-presenting cell. This polarization response is driven by the localized accumulation of diacylglycerol, which recruits...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1306180110

    authors: Liu X,Kapoor TM,Chen JK,Huse M

    更新日期:2013-07-16 00:00:00

  • A single-stranded DNA binding protein binds the origin of replication of the duplex kinetoplast DNA.

    abstract::Replication of the kinetoplast DNA (kDNA) minicircle of trypanosomatids initiates at a conserved 12-nt sequence, 5'-GGGGTTGGTGTA-3', termed the universal minicircle sequence (UMS). A sequence-specific single-stranded DNA-binding protein from Crithidia fasciculata binds the heavy strand of the 12-mer UMS. Whereas this ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.92.23.10511

    authors: Avrahami D,Tzfati Y,Shlomai J

    更新日期:1995-11-07 00:00:00

  • Developmentally regulated mannose 6-phosphate receptor-mediated transport of a lysosomal enzyme across the blood-brain barrier.

    abstract::Mucopolysaccharidosis type VII is a lysosomal storage disorder resulting from inherited deficiency of beta-glucuronidase (GUS). Mucopolysaccharidosis type VII is characterized by glycosaminoglycan storage in most tissues, including brain. In these disorders, enzyme delivery across the blood-brain barrier (BBB) is the ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0405042101

    authors: Urayama A,Grubb JH,Sly WS,Banks WA

    更新日期:2004-08-24 00:00:00

  • n-Type silicon photoelectrochemistry in methanol: Design of a 10.1% efficient semiconductor/liquid junction solar cell.

    abstract::n-Type Si electrodes in MeOH solvent with 0.2 M (1-hydroxyethyl)ferrocene, 0.5 mM (1-hydroxyethyl)ferricenium, and 1.0 M LiClO(4) exhibit air mass 2 conversion efficiencies of 10.1% for optical energy into electricity. We observe open-circuit voltages of 0.53 V and short-circuit quantum efficiencies for electron flow ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.80.4.1152

    authors: Gronet CM,Lewis NS,Cogan G,Gibbons J

    更新日期:1983-02-01 00:00:00

  • Regulation of pea seed pyrophosphate-dependent phosphofructokinase: Evidence for interconversion of two molecular forms as a glycolytic regulatory mechanism.

    abstract::Two molecular forms of pyrophosphate-dependent phosphofructokinase (PP(i)-PFK; pyrophosphate:D-fructose-6-phosphate 1-phosphotransferase; EC 2.7.1.90) have been found whose activity depends upon association and dissociation characteristics regulated by fructose 2,6-bisphosphate (Fru-2,6-P(2)). PP(i)-PFK was purified 2...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.81.16.5051

    authors: Wu MX,Smyth DA,Black CC

    更新日期:1984-08-01 00:00:00

  • Isolation of pi-alcohol dehydrogenase of human liver: is it a determinant of alcoholism?

    abstract::HUMAN LIVER ALCOHOL DEHYDROGENASE (ALCOHOL: NAD(+) oxidoreductase, EC 1.1.1.1), homogeneous by physicochemical criteria, has been available in quantity only recently [Lange, L. G. & Vallee, B. L. (1976) Biochemistry 15, 4681-4686]. Until now, the biochemical basis of human alcohol metabolism had to be extrapolated fro...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.74.10.4378

    authors: Li TK,Bosron WF,Dafeldecker WP,Lange LG,Vallee BL

    更新日期:1977-10-01 00:00:00

  • Constituents and functional implications of the rat default mode network.

    abstract::The default mode network (DMN) has been suggested to support a variety of self-referential functions in humans and has been fractionated into subsystems based on distinct responses to cognitive tasks and functional connectivity architecture. Such subsystems are thought to reflect functional hierarchy and segregation w...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1601485113

    authors: Hsu LM,Liang X,Gu H,Brynildsen JK,Stark JA,Ash JA,Lin CP,Lu H,Rapp PR,Stein EA,Yang Y

    更新日期:2016-08-02 00:00:00

  • Synthetic peptide homologous to beta protein from Alzheimer disease forms amyloid-like fibrils in vitro.

    abstract::Progressive amyloid deposition in senile plaques and cortical blood vessels may play a central role in the pathogenesis of Alzheimer disease. We have used x-ray diffraction and electron microscopy to study the molecular organization and morphology of macromolecular assemblies formed by three synthetic peptides homolog...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.84.19.6953

    authors: Kirschner DA,Inouye H,Duffy LK,Sinclair A,Lind M,Selkoe DJ

    更新日期:1987-10-01 00:00:00

  • Searching for efficient Markov chain Monte Carlo proposal kernels.

    abstract::Markov chain Monte Carlo (MCMC) or the Metropolis-Hastings algorithm is a simulation algorithm that has made modern Bayesian statistical inference possible. Nevertheless, the efficiency of different Metropolis-Hastings proposal kernels has rarely been studied except for the Gaussian proposal. Here we propose a unique ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1311790110

    authors: Yang Z,Rodríguez CE

    更新日期:2013-11-26 00:00:00

  • Transcriptional response to stress in the dynamic chromatin environment of cycling and mitotic cells.

    abstract::Heat shock factors (HSFs) are the master regulators of transcription under protein-damaging conditions, acting in an environment where the overall transcription is silenced. We determined the genomewide transcriptional program that is rapidly provoked by HSF1 and HSF2 under acute stress in human cells. Our results rev...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1305275110

    authors: Vihervaara A,Sergelius C,Vasara J,Blom MA,Elsing AN,Roos-Mattjus P,Sistonen L

    更新日期:2013-09-03 00:00:00

  • Resolving the HONO formation mechanism in the ionosphere via ab initio molecular dynamic simulations.

    abstract::Solar emission produces copious nitrosonium ions (NO(+)) in the D layer of the ionosphere, 60 to 90 km above the Earth's surface. NO(+) is believed to transfer its charge to water clusters in that region, leading to the formation of gaseous nitrous acid (HONO) and protonated water cluster. The dynamics of this reactio...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1601651113

    authors: He R,Li L,Zhong J,Zhu C,Francisco JS,Zeng XC

    更新日期:2016-04-26 00:00:00

  • Identification of functional domains and evolution of Tc1-like transposable elements.

    abstract::Tc1-like transposable elements from teleost fish have been phylogenetically examined to determine the mechanisms involved in their evolution and conserved domains of function. We identified two new functional domains in these elements. The first is a bipartite nuclear localization signal, indicating that transposons c...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.93.10.5008

    authors: Ivics Z,Izsvak Z,Minter A,Hackett PB

    更新日期:1996-05-14 00:00:00

  • Divergent effects of new cyclooxygenase inhibitors on gastric ulcer healing: Shifting the angiogenic balance.

    abstract::Delayed gastric ulcer healing is a well recognized problem associated with the use of cyclooxygenase (COX) inhibitors. In contrast, NO-releasing COX inhibitors do not interfere with ulcer healing. These divergent effects may in part be due to differences in their effects on platelets, which are known to influence ulce...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.202392199

    authors: Ma L,del Soldato P,Wallace JL

    更新日期:2002-10-01 00:00:00

  • Photooxidation of cytochrome P450-BM3.

    abstract::High-valent iron-oxo species are thought to be intermediates in the catalytic cycles of oxygenases and peroxidases. An attractive route to these iron-oxo intermediates involves laser flash-quench oxidation of ferric hemes, as demonstrated by our work on the ferryl (compound II) and ferryl porphyrin radical cation (com...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1012381107

    authors: Ener ME,Lee YT,Winkler JR,Gray HB,Cheruzel L

    更新日期:2010-11-02 00:00:00

  • MuB is an AAA+ ATPase that forms helical filaments to control target selection for DNA transposition.

    abstract::MuB is an ATP-dependent nonspecific DNA-binding protein that regulates the activity of the MuA transposase and captures target DNA for transposition. Mechanistic understanding of MuB function has previously been hindered by MuB's poor solubility. Here we combine bioinformatic, mutagenic, biochemical, and electron micr...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1309499110

    authors: Mizuno N,Dramićanin M,Mizuuchi M,Adam J,Wang Y,Han YW,Yang W,Steven AC,Mizuuchi K,Ramón-Maiques S

    更新日期:2013-07-02 00:00:00

  • Functional identification of the hematopoietic stem cell niche in the ventral domain of the embryonic dorsal aorta.

    abstract::The first definitive/adult-type hematopoietic stem cells (HSCs) in the mouse aorta-gonad-mesonephros region emerge between embryonic days 10.5 and 11.5. The discovery of clusters of hematopoietic cells on the ventral luminal surface of the dorsal aorta in various vertebrate species has led to speculation that the floo...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0700984104

    authors: Taoudi S,Medvinsky A

    更新日期:2007-05-29 00:00:00

  • Labeling and other effects of actinomycin D on human chromosomes.

    abstract::(3)H-actinomycin D, a guanine-binding agent, labels fixed human chromosomes nonrandomly. Actinomycin D added in G2 inhibits secondary constrictions and breaks chromosomes. There is some tendency for label to be concentrated at the ends of chromosomes and near the centromere. Labeling with (3)H-thymidine in the late st...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.65.3.585

    authors: Miles CP

    更新日期:1970-03-01 00:00:00

  • Self-assembly of synthetic peptides control conformation and optical properties of a zwitterionic polythiophene derivative.

    abstract::The optical transitions of a chiral, three-substituted polythiophene with an amino acid function can be tuned by interactions with synthetic peptides. The addition of a positively charged peptide with a random-coil formation will force the polymer to adopt a nonplanar conformation, and the intensity of the emitted lig...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1834422100

    authors: Nilsson KP,Rydberg J,Baltzer L,Inganäs O

    更新日期:2003-09-02 00:00:00

  • Nucleic acid transport through carbon nanotube membranes.

    abstract::We study the electrophoretic transport of single-stranded RNA molecules through 1.5-nm-wide pores of carbon nanotube membranes by molecular dynamics simulations. From approximately 170 individual RNA translocation events analyzed at full atomic resolution of solvent, membrane, and RNA, we identify key factors in membr...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0402699101

    authors: Yeh IC,Hummer G

    更新日期:2004-08-17 00:00:00