Repeated observation of breast tumor subtypes in independent gene expression data sets.

abstract：:We use a three-dimensional, higher-order ice flow model and a realistic initial condition to simulate dynamic perturbations to the Greenland ice sheet during the last decade and to assess their contribution to sea level by 2100. Starting from our initial condition, we apply a time series of observationally constrained...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Price SF,Payne AJ,Howat IM,Smith BE

更新日期：2011-05-31 00:00:00

abstract：:Immune responses can interfere with the effective use of therapeutic proteins to treat genetic deficiencies and have been challenging to manage. To address this problem, we adapted and studied methods of immune tolerance used in canine organ transplantation research to soluble protein therapeutics. A tolerization regi...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kakkis E,Lester T,Yang R,Tanaka C,Anand V,Lemontt J,Peinovich M,Passage M

更新日期：2004-01-20 00:00:00

abstract：:The parietal cell (PC) plays an important role in normal gastric physiology and in common diseases of the stomach. Although the genes involved in acid secretion are well known, there is limited molecular information about other aspects of PC function. We have generated a comprehensive database of genes expressed prefe...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Mills JC,Syder AJ,Hong CV,Guruge JL,Raaii F,Gordon JI

更新日期：2001-11-20 00:00:00

abstract：:Functional lysosomes mediate autophagy and macropinocytosis for nutrient acquisition. Pancreatic ductal adenocarcinoma (PDAC) tumors exhibit high basal lysosomal activity, and inhibition of lysosome function suppresses PDAC cell proliferation and tumor growth. However, the codependencies induced by lysosomal inhibitio...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Elliott IA,Dann AM,Xu S,Kim SS,Abt ER,Kim W,Poddar S,Moore A,Zhou L,Williams JL,Capri JR,Ghukasyan R,Matsumura C,Tucker DA,Armstrong WR,Cabebe AE,Wu N,Li L,Le TM,Radu CG,Donahue TR

更新日期：2019-04-02 00:00:00

abstract：:To evade host immune mechanisms, many bacteria secrete immunomodulatory enzymes. Streptococcus pyogenes, one of the most common human pathogens, secretes a large endoglycosidase, EndoS, which removes carbohydrates in a highly specific manner from IgG antibodies. This modification renders antibodies incapable of elicit...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Trastoy B,Lomino JV,Pierce BG,Carter LG,Günther S,Giddens JP,Snyder GA,Weiss TM,Weng Z,Wang LX,Sundberg EJ

更新日期：2014-05-06 00:00:00

abstract：:An important goal in biology is to predict from sequence data the high-resolution structures of proteins and the interactions that occur between them. In this paper, we describe a computational approach that can make these types of predictions for a series of coiled-coil dimers. Our method comprises a dual strategy th...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Keating AE,Malashkevich VN,Tidor B,Kim PS

更新日期：2001-12-18 00:00:00

abstract：:The mechanism of phosphosylation and dephosphorylation of spectrin from human erythrocyte membranes has been examined under closely physiological conditions. The results support the hypothesis that spectrin is an autophosphorylating and dephosphorylating system. (i) Extraction from ghosts of up to 85% of the kinase (c...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Imhof BA,Acha-Orbea HJ,Libermann TA,Reber BF,Lanz JH,Winterhalter KH,Birchmeier W

更新日期：1980-06-01 00:00:00

abstract：:A distinct phosphodiesterasic activity (EC 3.1.4) was found in both mono- and dicotyledonous plants that catalyzes the hydrolytic breakdown of ADPglucose (ADPG) to produce equimolar amounts of glucose-1-phosphate and AMP. The enzyme responsible for this activity, referred to as ADPG pyrophosphatase (AGPPase), was puri...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Rodriguez-López M,Baroja-Fernández E,Zandueta-Criado A,Pozueta-Romero J

更新日期：2000-07-18 00:00:00

abstract：:Many experiments in the past have demonstrated the requirement of de novo gene expression during the long-term retention of learning and memory. Although previous studies implicated individual genes or genetic pathways in learning and memory, they did not uncover the collective behaviors or patterns of the genes. We h...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Cavallaro S,D'Agata V,Manickam P,Dufour F,Alkon DL

更新日期：2002-12-10 00:00:00

abstract：:This paper is about an algorithm, FlexTree, for general supervised learning. It extends the binary tree-structured approach (Classification and Regression Trees, CART) although it differs greatly in its selection and combination of predictors. It is particularly applicable to assessing interactions: gene by gene and g...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Huang J,Lin A,Narasimhan B,Quertermous T,Hsiung CA,Ho LT,Grove JS,Olivier M,Ranade K,Risch NJ,Olshen RA

更新日期：2004-07-20 00:00:00

abstract：:Abscisic acid (ABA) is a ubiquitous phytohormone involved in many developmental processes and stress responses of plants. ABA moves within the plant, and intracellular receptors for ABA have been recently identified; however, no ABA transporter has been described to date. Here, we report the identification of the ATP-...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kang J,Hwang JU,Lee M,Kim YY,Assmann SM,Martinoia E,Lee Y

更新日期：2010-02-02 00:00:00

abstract：:The oncoproteins MDM2 and MDMX negatively regulate the activity and stability of the tumor suppressor protein p53, conferring tumor development and survival. Antagonists targeting the p53-binding domains of MDM2 and MDMX kill tumor cells both in vitro and in vivo by reactivating the p53 pathway, promising a class of a...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Liu M,Li C,Pazgier M,Li C,Mao Y,Lv Y,Gu B,Wei G,Yuan W,Zhan C,Lu WY,Lu W

更新日期：2010-08-10 00:00:00

abstract：:Granulocyte-colony-stimulating factor (G-CSF) stimulates the proliferation and differentiation of cells of the neutrophil lineage by interaction with a specific receptor. Early signal transduction events following G-CSF receptor activation were studied. We detected tyrosine phosphorylation of both the G-CSF receptor a...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Nicholson SE,Oates AC,Harpur AG,Ziemiecki A,Wilks AF,Layton JE

更新日期：1994-04-12 00:00:00

abstract：:DNA sequence analysis of a region contained within a large, interspersed repetitive family of mice reveals a long open reading frame. This sequence extends 978 base pairs between two stop codons, creating a reading frame that is open for 326 amino acids. The DNA sequence in this region is conserved between three dista...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Martin SL,Voliva CF,Burton FH,Edgell MH,Hutchison CA 3rd

更新日期：1984-04-01 00:00:00

abstract：:To modify the lac permease of Escherichia coli for fluorescence spectroscopy, six tryptophan residues at positions 10, 33, 78, 151, 171, and 223 were first replaced individually with phenylalanine by using oligonucleotide-directed site-specific mutagenesis. None of the tryptophan residues is critical for activity, as ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Menezes ME,Roepe PD,Kaback HR

更新日期：1990-03-01 00:00:00

abstract：:Epithelial growth factor-like 7 (EGFL7) is a protein that is secreted by endothelial cells and plays an important role in angiogenesis. Although EGFL7 is aberrantly overexpressed in solid tumors, its role in leukemia has not been evaluated. Here, we report that levels of both EGFL7 mRNA and EGFL7 protein are increased...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Papaioannou D,Shen C,Nicolet D,McNeil B,Bill M,Karunasiri M,Burke MH,Ozer HG,Yilmaz SA,Zitzer N,Behbehani GK,Oakes CC,Steiner DJ,Marcucci G,Powell BL,Kolitz JE,Carter TH,Wang ES,Mrózek K,Croce CM,Caligiuri MA,Bl

更新日期：2017-06-06 00:00:00

abstract：:BDF1 [(C57BL/6 X DBA/2)F1] mice were primed with alum-absorbed ovalbumin, and their spleen cells were cultured with ovalbumin to activate antigen-primed T cells. The activated T cells were then propagated in interleukin 2-containing medium in the presence or absence of affinity-purified glycosylation-inhibiting factor...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Iwata M,Ishizaka K

更新日期：1987-04-01 00:00:00

abstract：:The effect of reflex splanchnic nerve stimulation on proenkephalin A biosynthesis was investigated in the rat adrenal medulla. Tissue levels of native [Met5]enkephalin-like immunoreactivity (IR) (measured by direct RIA of tissue extracts), cryptic [Met5]enkephalin-like IR (calculated as the increase in [Met5]enkephali...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kanamatsu T,Unsworth CD,Diliberto EJ Jr,Viveros OH,Hong JS

更新日期：1986-12-01 00:00:00

abstract：:Experimental systemic lupus erythematosus (SLE) can be induced in naive mice by immunization with a murine monoclonal anti-DNA antibody (mAb), 5G12, that bears a major idiotype designated 16/6 Id. Strain-dependent differences were observed in the proliferative responses of lymph node cells of mice immunized with two p...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Waisman A,Ruiz PJ,Israeli E,Eilat E,Könen-Waisman S,Zinger H,Dayan M,Mozes E

更新日期：1997-04-29 00:00:00

abstract：:8-Methylbenz[a]anthracene (8-MeBaA) transdihydrodiol metabolites were isolated by reversed-phase and normal-phase HPLCs from incubations of 8-MeBaA with liver microsomes or a reconstituted system containing purified cytochrome P-448 and epoxide hydrolase. Regardless of the enzyme source, the metabolically formed 8-MeB...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Yang SK,Chou MW,Fu PP,Wislocki PG,Lu AH

更新日期：1982-11-01 00:00:00

abstract：:Operant conditioning techniques were used to assess how gender and song familiarity affect song discrimination in adult zebra finches (Taeniopygia guttata). Twenty-five males and females, divided into five cohorts, were trained to discriminate between conspecific songs at different times of year. Males discriminating ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Cynx J,Nottebohm F

更新日期：1992-02-15 00:00:00

abstract：:The three members of the Brn-3 family of POU domain transcription factors are found in highly restricted sets of central nervous system neurons. Within the retina, these factors are present only within subsets of ganglion cells. We show here that in the developing mouse retina, Brn-3b protein is first observed in pres...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Gan L,Xiang M,Zhou L,Wagner DS,Klein WH,Nathans J

更新日期：1996-04-30 00:00:00

abstract：:The functions of neurotransmitters in fetal development are poorly understood. Genetic observations have suggested a role for the inhibitory amino acid neurotransmitter gamma-aminobutyric acid (GABA) in the normal development of the mouse palate. Mice homozygous for mutations in the beta-3 GABAA receptor subunit devel...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Condie BG,Bain G,Gottlieb DI,Capecchi MR

更新日期：1997-10-14 00:00:00

abstract：:That tumors cause changes in surrounding tissues is well documented, but whether they also affect distant tissues is uncertain. Such knowledge may be important in understanding the relationship between cancer and overall patient health. To address this question, we examined tissues distant to sites of implanted tumors...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Redon CE,Dickey JS,Nakamura AJ,Kareva IG,Naf D,Nowsheen S,Kryston TB,Bonner WM,Georgakilas AG,Sedelnikova OA

更新日期：2010-10-19 00:00:00

abstract：:In everyday listening, sound reaches our ears directly from a source as well as indirectly via reflections known as reverberation. Reverberation profoundly distorts the sound from a source, yet humans can both identify sound sources and distinguish environments from the resulting sound, via mechanisms that remain uncl...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Traer J,McDermott JH

更新日期：2016-11-29 00:00:00

abstract：:Drosophila melanogaster CRYPTOCHROME (CRY) mediates behavioral and electrophysiological responses to blue light coded by circadian and arousal neurons. However, spectroscopic and biochemical assays of heterologously expressed CRY suggest that CRY may mediate functional responses to UV-A (ultraviolet A) light as well. ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Baik LS,Fogle KJ,Roberts L,Galschiodt AM,Chevez JA,Recinos Y,Nguy V,Holmes TC

更新日期：2017-01-24 00:00:00

abstract：:Evolutionary innovations often arise from complex genetic and ecological interactions, which can make it challenging to understand retrospectively how a novel trait arose. In a long-term experiment, Escherichia coli gained the ability to use abundant citrate (Cit(+)) in the growth medium after ∼31,500 generations of e...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Quandt EM,Deatherage DE,Ellington AD,Georgiou G,Barrick JE

更新日期：2014-02-11 00:00:00

abstract：:Under steady-state conditions, the immune system is poised to sense and respond to the microbiota. As such, immunity to the microbiota, including T cell responses, is expected to precede any inflammatory trigger. How this pool of preformed microbiota-specific T cells contributes to tissue pathologies remains unclear. ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Hurabielle C,Link VM,Bouladoux N,Han SJ,Merrill ED,Lightfoot YL,Seto N,Bleck CKE,Smelkinson M,Harrison OJ,Linehan JL,Tamoutounour S,Lionakis MS,Kaplan MJ,Nakajima S,Belkaid Y

更新日期：2020-07-14 00:00:00

abstract：:Selection of mammalian cells in progressively increasing concentrations of methotrexate results in selective amplification of DNA sequences coding for dihydrofolate reductase (tetrahydrofolate dehydrogenase, 5,6,7,8-tetrahydrofolate:NADP+ oxidoreductase, EC 1.5.1.3). In some cell variants the amplified genes are stabl...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kaufman RJ,Brown PC,Schimke RT

更新日期：1979-11-01 00:00:00

abstract：:Evolution of new enzymatic activities is believed to require a period of gene sharing in which a single enzyme must serve both its original function and a new function that has become advantageous to the organism. Subsequent gene duplication allows one copy to maintain the original function, while the other diverges t...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： McLoughlin SY,Copley SD

更新日期：2008-09-09 00:00:00