Global analysis of gene expression in yeast.

abstract：:Cotton (Gossypium spp.) is an imperative economic crop of the globe due to its natural textile fiber. Molecular mechanisms of fiber development have been greatly revealed in allotetraploid cotton but remained unexplored in Gossypium herbaceum. G. herbaceum can withstand the rigors of nature like drought and pests but ...

journal_title：Functional & integrative genomics

authors： Parekh MJ,Kumar S,Fougat RS,Zala HN,Pandit RJ

更新日期：2018-03-01 00:00:00

abstract：:We have previously reported that the deletion of BMAL1 gene has opposite effects in respect to its contribution to the pathways that are effective in the multistage carcinogenesis process. BMAL1 deletion sensitized nearly normal breast epithelial (MCF10A) and invasive breast cancer cells (MDA-MB-231) to cisplatin- and...

journal_title：Functional & integrative genomics

authors： Emisoglu-Kulahli H,Gul S,Morgil H,Ozcan O,Aygenli F,Selvi S,Kavakli IH,Ozturk N

更新日期：2021-01-01 00:00:00

abstract：:Stem blister canker, caused by Botryosphaeria dothidea, is becoming the most serious disease of poplar in China. The molecular basis of the poplar in response to stem blister canker is not well understood. To reveal the global transcriptional changes of poplar to infection by B. dothidea, Solexa paired-end sequencing ...

journal_title：Functional & integrative genomics

authors： Liao W,Ji L,Wang J,Chen Z,Ye M,Ma H,An X

更新日期：2014-09-01 00:00:00

abstract：:The oomycete pathogen Plasmopara viticola (Berk. et Curt.) Berl. et de Toni is the causing agent of the destructive downy mildew disease in grapevine. Despite the advances towards elucidation of grapevine resistance mechanisms to downy mildew, increased knowledge of the biological and genetic components of the pathosy...

journal_title：Functional & integrative genomics

authors： Figueiredo A,Monteiro F,Fortes AM,Bonow-Rex M,Zyprian E,Sousa L,Pais MS

更新日期：2012-06-01 00:00:00

abstract：:GDSL-type esterase/lipase (GELP) is mainly characterized by a conserved GDSL domain at N terminus, and is widely found in all living species, both prokaryotes and eukaryotes. GELP gene family consists of a wide range of members playing important roles in plant physiological processes, such as development, stress respo...

journal_title：Functional & integrative genomics

authors： Cao Y,Han Y,Meng D,Abdullah M,Yu J,Li D,Jin Q,Lin Y,Cai Y

更新日期：2018-11-01 00:00:00

abstract：:Medicago sativa L. (alfalfa) 'Zhaodong' is an important forage legume that can safely survive in northern China where winter temperatures reach as low as -30 °C. Survival of alfalfa following freezing stress depends on the amount and revival ability of crown buds. In order to investigate the molecular mechanisms of fr...

journal_title：Functional & integrative genomics

authors： Song L,Jiang L,Chen Y,Shu Y,Bai Y,Guo C

更新日期：2016-09-01 00:00:00

abstract：:The symbiotic N(2)-fixing alpha-proteobacterium Sinorhizobium meliloti has three replicons: a circular chromosome (3.7 Mb) and two smaller replicons, pSymA (1.4 Mb) and pSymB (1.7 Mb). Sequence analysis has revealed that an essential gene is carried on pSymB, which brings into question whether pSymB should be consider...

journal_title：Functional & integrative genomics

authors： Wong K,Finan TM,Golding GB

更新日期：2002-11-01 00:00:00

abstract：:Gastrointestinal nematodes of the genus Cooperia are arguably the most important parasites of cattle. The bovine jejunal transcriptome was characterized in response to Cooperia oncophora infection using RNA-seq technology. Approximately 71% of the 25,670 bovine genes were detected in the jejunal transcriptome. However...

journal_title：Functional & integrative genomics

authors： Li RW,Schroeder SG

更新日期：2012-03-01 00:00:00

abstract：:In grapes (Vitis vinifera L.), exogenous gibberellic acid (GA3) is applied at different stages of bunch development to achieve desirable bunch shape and berry size in seedless grapes used for table purpose. RNA sequence-based transcriptome analysis was used to understand the mechanism of GA3 action at cluster emergenc...

journal_title：Functional & integrative genomics

authors： Upadhyay A,Maske S,Jogaiah S,Kadoo NY,Gupta VS

更新日期：2018-07-01 00:00:00

abstract：:Late blight is a serious economic threat to potato crop, sometimes leading to complete crop loss. The resistance in potato to late blight can be qualitative or quantitative in nature. Qualitative resistance is not durable. Though quantitative resistance is durable, the breeding is challenging due to polygenic inherita...

journal_title：Functional & integrative genomics

authors： Yogendra KN,Pushpa D,Mosa KA,Kushalappa AC,Murphy A,Mosquera T

更新日期：2014-06-01 00:00:00

abstract：:As the amino acid storing organelle, the protein bodies provide nutrients for embryo development, seed germination and early seedling growth through storage proteolysis in cereal plants, such as wheat and rice. In protein bodies, the monomeric and polymeric prolamins, i.e. gliadins and glutenins, form gluten and play ...

journal_title：Functional & integrative genomics

authors： She M,Ye X,Yan Y,Howit C,Belgard M,Ma W

更新日期：2011-03-01 00:00:00

abstract：:Campylobacter jejuni remains a major cause of human gastroenteritis with estimated annual incidence rate of 450 million infections worldwide. C. jejuni is a major burden to public health in both socioeconomically developing and industrialized nations. Virulence determinants involved in C. jejuni pathogenesis are multi...

journal_title：Functional & integrative genomics

authors： Mehla K,Ramana J

更新日期：2017-01-01 00:00:00

abstract：:Rhizoctonia solani AG1-IA is a soil-borne necrotrophic pathogen that causes devastating rice sheath blight disease in rice-growing regions worldwide. Sclerotia play an important role in the life cycle of R. solani AG1-IA. In this study, RNA sequencing was used to investigate the transcriptomic dynamics of sclerotial d...

journal_title：Functional & integrative genomics

authors： Shu C,Zhao M,Anderson JP,Garg G,Singh KB,Zheng W,Wang C,Yang M,Zhou E

更新日期：2019-09-01 00:00:00

abstract：:The proneness of diseases and susceptibility towards drugs vary from person to person. At present, there is a strong demand for the personalization of drugs. The genetic signature behind proneness of the disease has been studied through a comprehensive 'octopodial approach'. All the genetic variants included in the ap...

journal_title：Functional & integrative genomics

authors： Iyer PM,Karthikeyan S,Sanjay Kumar P,Krishnan Namboori PK

更新日期：2017-07-01 00:00:00

abstract：:The assembly of a 1.3-Mb size region of the wheat genome has provided the opportunity to study a recent nuclear mitochondrial DNA insertion (NUMT). In the present study, we have studied two bacterial artificial chromosomes (BACs) and characterized a 52-kb NUMT segment from the tetraploid and hexaploid wheat BAC librar...

journal_title：Functional & integrative genomics

authors： Zhang J,Jia J,Breen J,Kong X

更新日期：2011-12-01 00:00:00

abstract：:The Maize Gene Discovery Project (MGDP) is a 5-year NSF-funded plant genome initiative that began in 1998. The MGDP collaboration involves researchers at six universities from diverse disciplines with the common goal of discovering new maize genes and developing tools for the phenotypic characterization of maize mutan...

journal_title：Functional & integrative genomics

authors： Lunde CF,Morrow DJ,Roy LM,Walbot V

更新日期：2003-03-01 00:00:00

abstract：:Intronless genes, a characteristic feature of prokaryotes, constitute a significant portion of the eukaryotic genomes. Our analysis revealed the presence of 11,109 (19.9%) and 5,846 (21.7%) intronless genes in rice and Arabidopsis genomes, respectively, belonging to different cellular role and gene ontology categories...

journal_title：Functional & integrative genomics

authors： Jain M,Khurana P,Tyagi AK,Khurana JP

更新日期：2008-02-01 00:00:00

abstract：:Natural selection drives species adaptations to biotic and abiotic stresses. Species distributed along a moisture gradient, such as Stipa purpurea, a dominant grass in alpine arid and semi-arid meadows on the Tibetan Plateau, provide an opportunity to evaluate the effects of long-term adaptation to differing degrees o...

journal_title：Functional & integrative genomics

authors： Yang Y,Li X,Kong X,Ma L,Hu X,Yang Y

更新日期：2015-05-01 00:00:00

abstract：:Auxin response factors (ARFs) are recently discovered transcription factors that bind with auxin response elements (AuxRE, TGTCTC) to regulate the expression of early auxin-responsive genes. To our knowledge, the ARF gene family has never been characterized in cotton, the most important fiber crop in the world. In thi...

journal_title：Functional & integrative genomics

authors： Sun R,Wang K,Guo T,Jones DC,Cobb J,Zhang B,Wang Q

更新日期：2015-07-01 00:00:00

abstract：:Abiotic stress tolerance is a complex trait regulated by multiple genes and gene networks in plants. A range of abiotic stresses are known to limit rice productivity. Meta-transcriptomics has emerged as a powerful approach to decipher stress-associated molecular network in model crops. However, retaining specificity o...

journal_title：Functional & integrative genomics

authors： Smita S,Katiyar A,Lenka SK,Dalal M,Kumar A,Mahtha SK,Yadav G,Chinnusamy V,Pandey DM,Bansal KC

更新日期：2020-01-01 00:00:00

abstract：:The ATP-binding cassette (ABC) transporters are a large family of proteins responsible for the translocation of a variety of compounds across the membranes of both prokaryotes and eukaryotes. The inter-protein and intra-protein interactions in these traffic ATPases are still only poorly understood. In the present stud...

journal_title：Functional & integrative genomics

authors： Subba Rao G,Bachhawat AK,Gupta CM

更新日期：2002-04-01 00:00:00

abstract：:A cDNA library containing approximately 5,000 clones from germinating barley embryos was constructed and used to examine the variation in gene expression patterns during the first 4 days postimbibition. The expression profiles of embryos (including scutellum) from 4 to 96 h postimbibition were compared to a reference ...

journal_title：Functional & integrative genomics

authors： Watson L,Henry RJ

更新日期：2005-07-01 00:00:00

abstract：:Seasonal estrus is a key factor limiting animal fertility, and understanding the molecular mechanisms that regulate animal estrus is important for improving animal fertility. The pituitary gland, which is the most important endocrine gland in mammals, plays an important role in regulating the physiological processes s...

journal_title：Functional & integrative genomics

authors： Li X,Li C,Xu Y,Yao R,Li H,Ni W,Quan R,Zhang M,Liu L,Yu S,Ullah Y,Hu R,Li Y,Guo T,Wang X,Hu S

更新日期：2020-07-01 00:00:00

abstract：:Fungal species are potential dye decomposers since these secrete spectra of extracellular enzymes involved in catabolism. However, cellular mechanisms underlying azo dye catalysis and detoxification are incompletely understood and obscure. A potential strain designated as Penicillium oxalicum SAR-3 demonstrated broad-...

journal_title：Functional & integrative genomics

authors： Saroj S,Kumar K,Prasad M,Singh RP

更新日期：2014-12-01 00:00:00

abstract：:The ever-rising population of the twenty-first century together with the prevailing challenges, such as deteriorating quality of arable land and water, has placed a big challenge for plant breeders to satisfy human needs for food under erratic weather patterns. Rice, wheat, and maize are the major staple crops consume...

journal_title：Functional & integrative genomics

authors： Choudhary M,Wani SH,Kumar P,Bagaria PK,Rakshit S,Roorkiwal M,Varshney RK

更新日期：2019-09-01 00:00:00

abstract：:GRAS domain genes are a group of important plant-specific transcription factors that have been reported to be involved in plant development. In order to know the roles of GRAS genes in grapevine, a widely cultivated fruit crop, the study on grapevine GRAS (VvGRAS) was carried out, and from which, 43 were identified fr...

journal_title：Functional & integrative genomics

authors： Sun X,Xie Z,Zhang C,Mu Q,Wu W,Wang B,Fang J

更新日期：2016-07-01 00:00:00

abstract：:Tuber mustard (Brassica juncea (L.) Czern. et Coss. var. tumida Tsen et Lee) is an important vegetable crop with a characteristic of expanded stem that is edible. The underlying molecular mechanism of the stem expansion is not well understood. Here, we reported that a total of 51 differentially expressed fragments (DE...

journal_title：Functional & integrative genomics

authors： Cao L,Liu B,Li J,Yu N,Zou X,Chen L

更新日期：2015-11-01 00:00:00

abstract：:Genomic structural variation is an important and abundant source of genetic and phenotypic variation. We previously reported an initial analysis of copy number variations (CNVs) in Angus cattle selected for resistance or susceptibility to gastrointestinal nematodes. In this study, we performed a large-scale analysis o...

journal_title：Functional & integrative genomics

authors： Hou Y,Liu GE,Bickhart DM,Matukumalli LK,Li C,Song J,Gasbarre LC,Van Tassell CP,Sonstegard TS

更新日期：2012-03-01 00:00:00

abstract：:Although the economic value of wheat flour is determined by the complement of gluten proteins, these proteins have been challenging to study because of the complexity of the major protein groups and the tremendous sequence diversity among wheat cultivars. The completion of a high-quality wheat genome sequence from the...

journal_title：Functional & integrative genomics

authors： Altenbach SB,Chang HC,Simon-Buss A,Mohr T,Huo N,Gu YQ

更新日期：2020-01-01 00:00:00

abstract：:Drought is a major abiotic stress affecting crop productivity and quality. As a class of noncoding RNA, microRNA (miRNA) plays important roles in plant growth, development, and stress response. However, their response and roles in tomato drought stress is largely unknown. Here, by using high-throughput sequencing, we ...

journal_title：Functional & integrative genomics

authors： Liu M,Yu H,Zhao G,Huang Q,Lu Y,Ouyang B

更新日期：2018-01-01 00:00:00