Fold prediction of helical proteins using torsion angle dynamics and predicted restraints.

abstract：:Over the past 50 years, the rising tree line along Jumpingpound Ridge in the Rocky Mountains of Alberta, Canada, has reduced the area of alpine meadows and isolated populations that reside within them. By analyzing an 11-year data set of butterfly population sizes for 17 subpopulations along the ridge, we show that fo...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Roland J,Matter SF

更新日期：2007-08-21 00:00:00

abstract：:The avian neuroretina (NR) is part of the central nervous system and is composed of photoreceptors, neuronal cells, and Müller (glial) cells. These cells are derived from proliferating neuroectodermal precursors that differentiate after terminal mitosis and become organized in cell strata. Genes that are specifically ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Guermah M,Crisanti P,Laugier D,Dezelee P,Bidou L,Pessac B,Calothy G

更新日期：1991-05-15 00:00:00

abstract：:The structures of human platelet alpha 2-adrenergic receptors and rat liver alpha 1-adrenergic receptors were compared by utilizing isoelectric focusing, NaDodSO4/PAGE, and monoclonal antibody crossreactivity. Digitonin-solubilized alpha 1- and alpha 2-adrenergic receptors have an identical isoelectric point of 4.6. U...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Shreeve SM,Fraser CM,Venter JC

更新日期：1985-07-01 00:00:00

abstract：:B-1 B cells have been proposed to be preferentially generated from fetal progenitors, but this view is challenged by studies concluding that B-1 production is sustained throughout adult life. To address this controversy, we compared the efficiency with which hematopoietic stem cells (HSCs) and common lymphoid progenit...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Barber CL,Montecino-Rodriguez E,Dorshkind K

更新日期：2011-08-16 00:00:00

abstract：:The capacity of a so-called male recombination (MR) chromosome in Drosophila melanogaster to generate mutations at 14 X-chromosome loci specifying visible phenotypes was investigated. Appreciable increases in mutation were found at three loci y, sn, and ras. Tests of represnetative mutants generated at each locus esta...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Green MM

更新日期：1977-08-01 00:00:00

abstract：:In adipocytes, adenylate cyclase is positively regulated by beta-adrenergic agents and negatively regulated by adenosine. Incubation of adipocytes with adenosine deaminase relieves the inhibition of adenylate cyclase by destroying the adenosine that the cells release into the medium. When adipocytes are incubated with...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Chung FZ,Weber HW,Appleman MM

更新日期：1985-03-01 00:00:00

abstract：:How cells achieve their final sizes is a pervasive biological question. One strategy to increase cell size is for the cell to amplify its chromosomal DNA content through endoreduplication cycles. Although endoreduplication is widespread in eukaryotes, we know very little about its molecular mechanisms. Successful prog...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Sugimoto-Shirasu K,Roberts GR,Stacey NJ,McCann MC,Maxwell A,Roberts K

更新日期：2005-12-20 00:00:00

abstract：:Complete sequences for the intergenic regions of the genome of human respiratory syncytial virus were obtained by dideoxynucleotide sequencing using synthetic oligonucleotides. These experiments established that the 10 respiratory syncytial viral genes are arranged, without additional intervening genes, in the order 3...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Collins PL,Dickens LE,Buckler-White A,Olmsted RA,Spriggs MK,Camargo E,Coelingh KV

更新日期：1986-07-01 00:00:00

abstract：:Viruses have been implicated in the development of neurodegenerative diseases, such as Alzheimer's, Parkinson's, and multiple sclerosis. Human herpesvirus-6 (HHV-6) is a neurotropic virus that has been associated with a wide variety of neurologic disorders, including encephalitis, mesial temporal lobe epilepsy, and mu...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Harberts E,Yao K,Wohler JE,Maric D,Ohayon J,Henkin R,Jacobson S

更新日期：2011-08-16 00:00:00

abstract：:The first step in the replication of the adenovirus genome is the covalent attachment of the 5'-terminal nucleotide, dCMP, to the virus-encoded terminal protein precursor (pTP). This reaction can be observed in vitro and has been previously shown to be dependent upon either viral DNA or linearized plasmid DNA containi...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Challberg MD,Rawlins DR

更新日期：1984-01-01 00:00:00

abstract：:Amyloid fibrils were concentrated from the kidney, thyroid, and peripheral nerve of six patients with familial amyloidotic polyneuropathy (FAP). The fibril concentrates were solubilized in 6 M guanidine.HCl and fractionated on Sephadex G-100 columns. The elution profile of all FAP amyloid fibril concentrates revealed ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Costa PP,Figueira AS,Bravo FR

更新日期：1978-09-01 00:00:00

abstract：:Two functional domains in the primary structure of basic fibroblast growth factor (FGF) have been identified on the basis of their ability to interact with the FGF receptor, bind radiolabeled heparin, and modulate the cellular response to FGF. Peptides derived from these two functional domains can act as partial agoni...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Baird A,Schubert D,Ling N,Guillemin R

更新日期：1988-04-01 00:00:00

abstract：:Tumor hypoxia reduces the effectiveness of radiation therapy by limiting the biologically effective dose. An acute increase in tumor oxygenation before radiation treatment should therefore significantly improve the tumor cell kill after radiation. Efforts to increase oxygen delivery to the tumor have not shown positiv...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Benej M,Hong X,Vibhute S,Scott S,Wu J,Graves E,Le QT,Koong AC,Giaccia AJ,Yu B,Chen CS,Papandreou I,Denko NC

更新日期：2018-10-16 00:00:00

abstract：:Defining the virus-host interactions responsible for HIV-1 transmission, including the phenotypic requirements of viruses capable of establishing de novo infections, could be important for AIDS vaccine development. Previous analyses have failed to identify phenotypic properties other than chemokine receptor 5 (CCR5) a...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Parrish NF,Gao F,Li H,Giorgi EE,Barbian HJ,Parrish EH,Zajic L,Iyer SS,Decker JM,Kumar A,Hora B,Berg A,Cai F,Hopper J,Denny TN,Ding H,Ochsenbauer C,Kappes JC,Galimidi RP,West AP Jr,Bjorkman PJ,Wilen CB,Doms RW

更新日期：2013-04-23 00:00:00

abstract：:It is well established that assimilatory nitrate reductase (ANR) activity in soil is inhibited by ammonium (NH4+). To elucidate the mechanism of this inhibition, we studied the effect of L-methionine sulfoximine (MSX), an inhibitor of NH4+ assimilation by microorganisms, on assimilatory reduction of nitrate (NO3-) in ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： McCarty GW,Bremner JM

更新日期：1992-01-15 00:00:00

abstract：:An immature state of cellular differentiation--characterized by stem cell-like tendencies and impaired differentiation--is a hallmark of cancer. Using glioblastoma multiforme (GBM) as a model system, we sought to determine whether molecular determinants that drive cells toward terminal differentiation are also genetic...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Hu J,Ho AL,Yuan L,Hu B,Hua S,Hwang SS,Zhang J,Hu T,Zheng H,Gan B,Wu G,Wang YA,Chin L,DePinho RA

更新日期：2013-09-03 00:00:00

abstract：:In clinical trials comparing two treatments, one would often like to control the probability of erroneous decision while minimizing not the total sample size but the number of patients given the inferior treatment. To do this obviously requires that one use a datadependent allocation rule for the two treatments rather...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Flehinger BJ,Louis TA,Robbins H,Singer BH

更新日期：1972-10-01 00:00:00

abstract：:The expansion of machine learning to high-stakes application domains such as medicine, finance, and criminal justice, where making informed decisions requires clear understanding of the model, has increased the interest in interpretable machine learning. The widely used Classification and Regression Trees (CART) have ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Luna JM,Gennatas ED,Ungar LH,Eaton E,Diffenderfer ES,Jensen ST,Simone CB 2nd,Friedman JH,Solberg TD,Valdes G

更新日期：2019-10-01 00:00:00

abstract：:Infectious diseases of domesticated animals impact human well-being via food insecurity, loss of livelihoods, and human infections. While much research has focused on parasites that infect single host species, most parasites of domesticated mammals infect multiple species. The impact of multihost parasites varies acro...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Farrell MJ,Davies TJ

更新日期：2019-04-16 00:00:00

abstract：:Most human cancers are aneuploid and have chromosomal instability, which contrasts to the inability of human cells to normally tolerate aneuploidy. Noting that aneuploidy in human breast cancer correlates with increased expression levels of the Mps1 checkpoint gene, we investigated whether these high levels of Mps1 co...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Daniel J,Coulter J,Woo JH,Wilsbach K,Gabrielson E

更新日期：2011-03-29 00:00:00

abstract：:Saccharomyces cerevisiae strains expressing the activated RAS2Val19 gene or lacking both cAMP phosphodiesterase genes, PDE1 and PDE2, have impaired growth control and display an acute sensitivity to heat shock. We have isolated two classes of mammalian cDNAs from yeast expression libraries that suppress the heat shock...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Colicelli J,Nicolette C,Birchmeier C,Rodgers L,Riggs M,Wigler M

更新日期：1991-04-01 00:00:00

abstract：:Because RNAs fold as they are being synthesized, their transcription rate can affect their folding. Here, we report the results of single-molecule fluorescence studies that characterize the ligand-dependent cotranscriptional folding of the Escherichia coli thiM riboswitch that regulates translation. We found that the ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Uhm H,Kang W,Ha KS,Kang C,Hohng S

更新日期：2018-01-09 00:00:00

abstract：:Respiratory syncytial virus (RSV) can cause devastating lower respiratory tract infections in preterm infants or when other serious health problems are present. Immunoprophylaxis with palivizumab (Synagis), a humanized IgG1 mAb, is the current standard of care for preventing RSV infection in at-risk neonates. We have ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Hiatt A,Bohorova N,Bohorov O,Goodman C,Kim D,Pauly MH,Velasco J,Whaley KJ,Piedra PA,Gilbert BE,Zeitlin L

更新日期：2014-04-22 00:00:00

abstract：:Lupus nephritis (LN) is an autoimmune disease that occurs when autoantibodies complex with self-antigen and form immune complexes that accumulate in the glomeruli. These immune complexes initiate an inflammatory response resulting in glomerular injury. LN often concomitantly affects the tubulointerstitial compartment ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Hao W,Rovin BH,Friedman A

更新日期：2014-09-30 00:00:00

abstract：:A human peripheral T-cell cDNA library was screened with two labeled synthetic oligonucleotides encoding regions of a human placenta protein-tyrosine-phosphatase (protein-tyrosine-phosphate phosphohydrolase, EC 3.1.3.48). One positive clone was isolated and the nucleotide sequence was determined. It contained 1305 bas...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Cool DE,Tonks NK,Charbonneau H,Walsh KA,Fischer EH,Krebs EG

更新日期：1989-07-01 00:00:00

abstract：:Members of the platelet-derived growth factor (PDGF) ligand family are known to play important roles in wound healing and fibrotic disease. We show that both transient and stable expression of PDGF-C results in the development of liver fibrosis consisting of the deposition of collagen in a pericellular and perivenular...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Campbell JS,Hughes SD,Gilbertson DG,Palmer TE,Holdren MS,Haran AC,Odell MM,Bauer RL,Ren HP,Haugen HS,Yeh MM,Fausto N

更新日期：2005-03-01 00:00:00

abstract：:Helminthosporoside is a host-specific toxin produced by Helminthosporium sacchari, both in culture and in infected sugarcane tissue. The susceptibility of any given clone of sugarcane to disease is invariably associated with the presence of a toxin-binding protein. This report presents evidence for the presence of the...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Strobel GA,Hess WM

更新日期：1974-04-01 00:00:00

abstract：:In nearly all eukaryotes, at least some individuals inherit mitochondrial and chloroplast genes from only one parent. There is no single mechanism of uniparental inheritance: organelle gene inheritance is blocked by a variety of mechanisms and at different stages of reproduction in different species. Frequent changes ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Birky CW Jr

更新日期：1995-12-05 00:00:00

abstract：:Recombinant human migration inhibitory factor (MIF), isolated through functional expression cloning in COS-1 cells, up-regulates expression of genes encoding HLA-DR and interleukin 1 beta (IL-1 beta) and elaboration of IL-1 beta by human monocyte-derived macrophages. Administration of soluble bovine serum albumin or h...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Weiser WY,Pozzi LM,Titus RG,David JR

更新日期：1992-09-01 00:00:00

abstract：:A five-helix secondary structural model is proposed for eukaryotic cytoplasmic 5S rRNA. All available sequence data are consistent with this model including those from Chlorella 5S rRNA whose sequence is revised by data included here. Various architectural features of eukaryotic 5S rRNA are summarized in terms of this...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Luehrsen KR,Fox GE

更新日期：1981-04-01 00:00:00