The active site dynamics of 4-chlorobenzoyl-CoA dehalogenase.

abstract：:In the realm of protein-protein interactions, the assembly process of homooligomers plays a fundamental role because the majority of proteins fall into this category. A comprehensive understanding of this multistep process requires the characterization of the driving molecular interactions and the transient intermedia...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Barducci A,Bonomi M,Prakash MK,Parrinello M

更新日期：2013-12-03 00:00:00

abstract：:To study the role of low-abundance, embryonic muscle-specific gene transcripts, we have developed a method to screen cDNA clones from embryonic muscle for such sequences. The protocol involves two stages: first, partial enrichment for cDNA clones carrying possible embryo-specific sequences by selecting clones of low-a...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Ordahl CP,Kioussis D,Tilghman SM,Ovitt CE,Fornwald J

更新日期：1980-08-01 00:00:00

abstract：:Fish stocks experiencing high fishing mortality show a tendency to mature earlier and at a smaller size, which may have a genetic component and therefore long-lasting economic and biological effects. To date, the economic effects of such ecoevolutionary dynamics have not been empirically investigated. Using 70 y of da...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Eikeset AM,Richter A,Dunlop ES,Dieckmann U,Stenseth NC

更新日期：2013-07-23 00:00:00

abstract：:In order to understand the functions of simian virus 40 genes, permissive cells (TC7) were infected with mutants temperature sensitive in the complementation groups A, B, C, BC, and D at permissive and nonpermissive temperatures. Cells were examined for the localization of viral polypeptide antigens by immunofluoresce...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kasamatsu H,Nehorayan A

更新日期：1979-06-01 00:00:00

abstract：:When rat pancreatic polynucleosomes were poly(ADP-ribosyl)ated with purified calf thymus poly(ADP-ribose) polymerase and examined by electron microscopy, a relaxation of their native zigzag structure was observed. At high ionic strengths control nucleosomes condensed into 250-A-thick fibers, but poly(ADP-ribosyl)ated ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Poirier GG,de Murcia G,Jongstra-Bilen J,Niedergang C,Mandel P

更新日期：1982-06-01 00:00:00

abstract：:Hepatitis C virus (HCV) is a global epidemic manifested mainly by chronic infection. One strategy that HCV employs to establish chronic infection is to use the viral Ser protease NS3/4A to cleave some unknown cellular targets involved in innate immunity. Here we show that the target of NS3/4A is the mitochondrial anti...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Li XD,Sun L,Seth RB,Pineda G,Chen ZJ

更新日期：2005-12-06 00:00:00

abstract：:Characterization and functional annotation of the large number of proteins predicted from genome sequencing projects poses a major scientific challenge. Whereas several proteomics techniques have been developed to quantify the abundance of proteins, these methods provide little information regarding protein function. ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Okerberg ES,Wu J,Zhang B,Samii B,Blackford K,Winn DT,Shreder KR,Burbaum JJ,Patricelli MP

更新日期：2005-04-05 00:00:00

abstract：:IL-17 has been implicated in a number of inflammatory diseases, but the conditions of antigen exposure that drive the generation of Th17 responses have not been well defined. Epicutaneous (EC) immunization of mice with ovalbumin (OVA), which causes allergic skin inflammation with many characteristics of the skin lesio...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： He R,Oyoshi MK,Jin H,Geha RS

更新日期：2007-10-02 00:00:00

abstract：:We show here that a cell-wall invertase encoded by the Incw1 gene is regulated at both the transcriptional and posttranscriptional levels by sugars in a heterotrophic cell suspension culture of maize. The Incw1 gene encoded two transcripts: Incw1-S (small) and Incw1-L (large); the size variation was attributable to di...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Cheng WH,Taliercio EW,Chourey PS

更新日期：1999-08-31 00:00:00

abstract：:Secretion of inflammatory mediators by rat mast cells (line RBL-2H3) was earlier shown to be inhibited upon clustering a membrane glycoprotein by monoclonal antibody G63. This glycoprotein, named mast cell function-associated antigen (MAFA), was also shown to interfere with the coupling cascade of the type 1 Fc epsilo...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Guthmann MD,Tal M,Pecht I

更新日期：1995-09-26 00:00:00

abstract：:As an aid to the study of bovine tuberculosis (TB), a simple model has been developed of an epidemic involving two species, cattle and badgers. Each species may infect the other. The proportion of animals affected is assumed relatively small so that the usual nonlinear aspects of epidemic theory are avoided. The model...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Cox DR,Donnelly CA,Bourne FJ,Gettinby G,McInerney JP,Morrison WI,Woodroffe R

更新日期：2005-12-06 00:00:00

abstract：:Eukaryotic translation initiation factor eIF-4E plays a central role in the recognition of the 7-methylguanosine-containing cap structure of mRNA and the formation of initiation complexes during protein synthesis. eIF-4E exists in both phosphorylated and nonphosphorylated forms, and the primary site of phosphorylation...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Minich WB,Balasta ML,Goss DJ,Rhoads RE

更新日期：1994-08-02 00:00:00

abstract：:Whereas all mammals have one glutamate dehydrogenase gene (GLUD1), humans and apes carry an additional gene (GLUD2), which encodes an enzyme with distinct biochemical properties. We inserted a bacterial artificial chromosome containing the human GLUD2 gene into mice and analyzed the resulting changes in the transcript...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Li Q,Guo S,Jiang X,Bryk J,Naumann R,Enard W,Tomita M,Sugimoto M,Khaitovich P,Pääbo S

更新日期：2016-05-10 00:00:00

abstract：:Climate change affects organisms worldwide with profound ecological and evolutionary consequences, often increasing population extinction risk. Climatic factors can increase the strength, variability, or direction of natural selection on phenotypic traits, potentially driving adaptive evolution. Phenotypic plasticity ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Svensson EI,Gomez-Llano M,Waller JT

更新日期：2020-11-24 00:00:00

abstract：:In a classic model of mammalian brain formation, precursors of principal glutamatergic neurons migrate radially along radial glia fibers whereas GABAergic interneuron precursors migrate tangentially. These migration modes have significant implications for brain function. Here we used clonal lineage tracing of active r...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Sun GJ,Zhou Y,Stadel RP,Moss J,Yong JH,Ito S,Kawasaki NK,Phan AT,Oh JH,Modak N,Reed RR,Toni N,Song H,Ming GL

更新日期：2015-07-28 00:00:00

abstract：:The multifunctional Ca2+/calmodulin-dependent protein kinase purified from rat brain cytosol undergoes an intramolecular self-phosphorylation or autophosphorylation. Autophosphorylation produces two strikingly different effects on kinase activity that are dependent on the level of ATP used in the reaction. At low but ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Lou LL,Lloyd SJ,Schulman H

更新日期：1986-12-01 00:00:00

abstract：:From a consideration of (varphi, Psi) values of the amino acids of myoglobin, lysozyme, the alpha and beta chains of horse oxyhemoglobin, tosyl-alpha-chymotrypsin, and carboxypeptidase A, an empirical procedure of predicting whether amino-acid residues in proteins are in a non-helical or may be in a helical conformati...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Wu TT,Kabat EA

更新日期：1971-07-01 00:00:00

abstract：:The neurofibromatosis type 1 (NF1) gene responsible for von Recklinghausen neurofibromatosis is related to regulators of ras proteins, and a portion of NF1 that is homologous to the ras GTPase-activating protein (GAP) encodes a similar GTPase-stimulating activity. We have raised rabbit antisera to a bacterially synthe...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： DeClue JE,Cohen BD,Lowy DR

更新日期：1991-11-15 00:00:00

abstract：:High-throughput gene expression data are one of the primary resources for exploring complex intracellular dynamics in modern biology. The integration of large amounts of public data may allow us to examine general dynamical relationships between regulators and target genes. However, obstacles for such analyses are stu...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Vandenbon A,Dinh VH,Mikami N,Kitagawa Y,Teraguchi S,Ohkura N,Sakaguchi S

更新日期：2016-04-26 00:00:00

abstract：:Several lines of evidence suggest that the mixed lineage leukemia protein (MLL, ALL-1, HRX) plays a role in regulating myelomonocytic differentiation. In this study we examined the effect of expression of MLL-AF9 on differentiation of the monoblastic U937 cell line by using a tetracycline-inducible expression system. ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Caslini C,Shilatifard A,Yang L,Hess JL

更新日期：2000-03-14 00:00:00

abstract：:The perceptual color qualities of hue, saturation, and brightness do not correspond in any simple way to the physical characteristics of retinal stimuli, a fact that poses a major obstacle for any explanation of color vision. Here we test the hypothesis that these basic color attributes are determined by the statistic...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Long F,Yang Z,Purves D

更新日期：2006-04-11 00:00:00

abstract：:Hsubc9, a human gene encoding a ubiquitin-conjugating enzyme, has been cloned. The 18-kDa HsUbc9 protein is homologous to the ubiquitin-conjugating enzymes Hus5 of Schizosaccharomyces pombe and Ubc9 of Saccharomyces cerevisiae. The Hsubc9 gene complements a ubc9 mutation of S. cerevisiae. It has been mapped to chromos...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Kovalenko OV,Plug AW,Haaf T,Gonda DK,Ashley T,Ward DC,Radding CM,Golub EI

更新日期：1996-04-02 00:00:00

abstract：:ATP is copackaged and coreleased with adrenergic, serotonergic, and cholinergic neurotransmitters, suggesting a possible interaction between the signaling pathways for ATP and these coreleased neurotransmitters. Muscarinic m2 and m4, alpha 2-adrenergic, and D2-dopaminergic neurotransmitter receptors, which have in com...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Felder CC,Williams HL,Axelrod J

更新日期：1991-08-01 00:00:00

abstract：:The modulation of K+ channels by serotonin (5-HT) receptors was studied by coinjecting Xenopus oocytes with mRNA transcribed in vitro from a cloned 5-HT 1C subtype (5-HT1C) receptor gene, together with size-fractionated mRNA isolated from rat cerebral cortex that expresses K+ channels. After intracellular loading with...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Panicker MM,Parker I,Miledi R

更新日期：1991-03-15 00:00:00

abstract：:Endometriosis is a highly prevalent gynecological disease with severe negative impacts on life quality and financial burden. Unfortunately, there is no cure for this disease, which highlights the need for further investigation about the pathophysiology of this disease to provide clues for developing novel therapeutic ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Li WN,Hsiao KY,Wang CA,Chang N,Hsu PL,Sun CH,Wu SR,Wu MH,Tsai SJ

更新日期：2020-10-13 00:00:00

abstract：:Molecular adaptation is typically assumed to proceed by sequential fixation of beneficial mutations. In diploids, this picture presupposes that for most adaptive mutations, the homozygotes have a higher fitness than the heterozygotes. Here, we show that contrary to this expectation, a substantial proportion of adaptiv...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Sellis D,Callahan BJ,Petrov DA,Messer PW

更新日期：2011-12-20 00:00:00

abstract：:The atmospheric and deep sea reservoirs of carbon dioxide are linked via physical, chemical, and biological processes. The last of these include photosynthesis, particle settling, and organic matter remineralization, and are collectively termed the "biological carbon pump." Herein, we present results from a 13-y (1992...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Karl DM,Church MJ,Dore JE,Letelier RM,Mahaffey C

更新日期：2012-02-07 00:00:00

abstract：:microRNA-146a (miR-146a) has been previously implicated as an essential molecular brake, preventing immune overreaction and malignant transformation by attenuating NF-κB signaling, putatively via repression of the Traf6 and Irak1 genes. The exact contribution of miR-146a-mediated silencing of these genes to the contro...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Magilnick N,Reyes EY,Wang WL,Vonderfecht SL,Gohda J,Inoue JI,Boldin MP

更新日期：2017-08-22 00:00:00

abstract：:Quantitatively identifying direct dependencies between variables is an important task in data analysis, in particular for reconstructing various types of networks and causal relations in science and engineering. One of the most widely used criteria is partial correlation, but it can only measure linearly direct associ...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Zhao J,Zhou Y,Zhang X,Chen L

更新日期：2016-05-03 00:00:00

abstract：:Focal cerebral ischemia and traumatic brain injury induce an escalating amount of cell death because of harmful mediators diffusing from the original lesion site. Evidence suggests that healthy cells surrounding these lesions attempt to protect themselves by producing endocannabinoids (eCBs) and activating cannabinoid...

journal_title：Proceedings of the National Academy of Sciences of the United States of America

authors： Witting A,Chen L,Cudaback E,Straiker A,Walter L,Rickman B,Möller T,Brosnan C,Stella N

更新日期：2006-04-18 00:00:00