Comparative analysis of microsatellite and allozyme markers: a case study investigating microgeographic differentiation in brown trout (Salmo trutta).

abstract：:The extent to which the gut microbiota may play a role in latitudinal clines of body mass variation (i.e., Bergmann's rule) remains largely unexplored. Here, we collected wild house mice from three latitudinal transects across North and South America and investigated the relationship between variation in the gut micro...

journal_title：Molecular ecology

authors： Suzuki TA,Martins FM,Phifer-Rixey M,Nachman MW

更新日期：2020-06-01 00:00:00

abstract：:Rivers and lake systems in the southern cone of South America have been widely influenced by historical glaciations, carrying important implications for the evolution of aquatic organisms, including prompting transitions between marine and freshwater habitats and by triggering hybridization among incipient species via...

journal_title：Molecular ecology

authors： Hughes LC,Cardoso YP,Sommer JA,Cifuentes R,Cuello M,Somoza GM,González-Castro M,Malabarba LR,Cussac V,Habit EM,Betancur-R R,Ortí G

更新日期：2020-02-01 00:00:00

abstract：:Functionally constrained genes are ideal insecticide targets because disruption is often fatal, and resistance mutations are typically costly. Synaptic acetylcholinesterase (AChE) is an essential neurotransmission enzyme targeted by insecticides used increasingly in malaria control. In Anopheles and Culex mosquitoes, ...

journal_title：Molecular ecology

authors： Weetman D,Mitchell SN,Wilding CS,Birks DP,Yawson AE,Essandoh J,Mawejje HD,Djogbenou LS,Steen K,Rippon EJ,Clarkson CS,Field SG,Rigden DJ,Donnelly MJ

更新日期：2015-06-01 00:00:00

abstract：:Genomic diversity is the evolutionary foundation for adaptation to environmental change and thus is essential to consider in conservation planning. Island species are ideal for investigating the evolutionary drivers of genomic diversity, in part because of the potential for biological replicates. Here, we use genome d...

journal_title：Molecular ecology

authors： Brüniche-Olsen A,Kellner KF,DeWoody JA

更新日期：2019-11-01 00:00:00

abstract：:Badgers are facultatively social, forming large groups at high density. Group-living appears to have high reproductive costs for females, and may lead to increased levels of inbreeding. The extent of female competition for reproduction has been estimated from field data, but knowledge of male reproductive success and ...

journal_title：Molecular ecology

authors： Carpenter PJ,Pope LC,Greig C,Dawson DA,Rogers LM,Erven K,Wilson GJ,Delahay RJ,Cheeseman CL,Burke T

更新日期：2005-01-01 00:00:00

abstract：:Natural hybridization between closely related taxa is frequent in many organismal groups, yet it has long been perceived as a force preventing diversification and speciation, especially so in animals. In recent years, growing evidence in favour of hybridization facilitating adaptive divergence has accumulated (Mallet ...

journal_title：Molecular ecology

authors： Renaut S

更新日期：2011-04-01 00:00:00

abstract：:Habitat fragmentation may disrupt original patterns of gene flow and lead to drift-induced differentiation among local population units. Top predators such as the jaguar may be particularly susceptible to this effect, given their low population densities, leading to small effective sizes in local fragments. On the oth...

journal_title：Molecular ecology

authors： Haag T,Santos AS,Sana DA,Morato RG,Cullen L Jr,Crawshaw PG Jr,De Angelo C,Di Bitetti MS,Salzano FM,Eizirik E

更新日期：2010-11-01 00:00:00

abstract：:Many insects possess endosymbiotic bacteria inside their body, wherein intimate interactions occur between the partners. While recent technological advancements have deepened our understanding of metabolic and evolutionary features of the symbiont genomes, molecular mechanisms underpinning the intimate interactions re...

journal_title：Molecular ecology

authors： Kikuchi Y,Fukatsu T

更新日期：2014-03-01 00:00:00

abstract：:Ribosomal DNA (rDNA) copy number variation (CNV) has major physiological implications for all organisms, but how it varies for fungi, an ecologically ubiquitous and important group of microorganisms, has yet to be systemically investigated. Here, we examine rDNA CNV using an in silico read depth approach for 91 fungal...

journal_title：Molecular ecology

authors： Lofgren LA,Uehling JK,Branco S,Bruns TD,Martin F,Kennedy PG

更新日期：2019-02-01 00:00:00

abstract：:Sequencing reduced-representation libraries of restriction site-associated DNA (RADseq) to identify single nucleotide polymorphisms (SNPs) is quickly becoming a standard methodology for molecular ecologists. Because of the scale of RADseq data sets, putative loci cannot be assessed individually, making the process of ...

journal_title：Molecular ecology

authors： O'Leary SJ,Puritz JB,Willis SC,Hollenbeck CM,Portnoy DS

更新日期：2018-07-10 00:00:00

abstract：:Achieving long-term persistence of species in urbanized landscapes requires characterizing population genetic structure to understand and manage the effects of anthropogenic disturbance on connectivity. Urbanization over the past century in coastal southern California has caused both precipitous loss of coastal sage s...

journal_title：Molecular ecology

authors： Barr KR,Kus BE,Preston KL,Howell S,Perkins E,Vandergast AG

更新日期：2015-05-01 00:00:00

abstract：:Sky islands provide ideal opportunities for understanding how climatic changes associated with Pleistocene glacial cycles influenced species distributions, genetic diversification, and demography. The salamander Plethodon ouachitae is largely restricted to high-elevation, mesic forest on six major mountains in the Oua...

journal_title：Molecular ecology

authors： Shepard DB,Burbrink FT

更新日期：2008-12-01 00:00:00

abstract：:Despite much discussion of the importance of quantifying and reporting genotyping error in molecular studies, it is still not standard practice in the literature. This is particularly a concern for amplified fragment length polymorphism (AFLP) studies, where differences in laboratory, peak-calling and locus-selection ...

journal_title：Molecular ecology

authors： Crawford LA,Koscinski D,Keyghobadi N

更新日期：2012-12-01 00:00:00

abstract：:Determining the structure of bacterial communities and their response to stimuli is key to understanding community function and the interactions that occur between micro-organisms and the environment. However, bacterial communities often comprise complex assemblages of large numbers of different bacterial populations....

journal_title：Molecular ecology

authors： Holben WE,Harris D

更新日期：1995-10-01 00:00:00

abstract：:Population studies have revealed that the fungal ectomycorrhizal morphospecies Tricholoma scalpturatum consists of at least two genetically distinct groups that occur sympatrically in several geographical areas. This discovery prompted us to examine species boundaries and relationships between members formerly assigne...

journal_title：Molecular ecology

authors： Jargeat P,Martos F,Carriconde F,Gryta H,Moreau PA,Gardes M

更新日期：2010-12-01 00:00:00

abstract：:Climate is one of the most important drivers of local adaptation in forest tree species. Standing levels of genetic diversity and structure within and among natural populations of forest trees are determined by the interplay between climatic heterogeneity and the balance between selection and gene flow. To investigate...

journal_title：Molecular ecology

authors： Mosca E,Eckert AJ,Di Pierro EA,Rocchini D,La Porta N,Belletti P,Neale DB

更新日期：2012-11-01 00:00:00

abstract：:Experimental evolution (EE) combined with whole-genome sequencing (WGS) has become a compelling approach to study the fundamental mechanisms and processes that drive evolution. Most EE-WGS studies published to date have used microbes, owing to their ease of propagation and manipulation in the laboratory and relatively...

journal_title：Molecular ecology

authors： Dettman JR,Rodrigue N,Melnyk AH,Wong A,Bailey SF,Kassen R

更新日期：2012-05-01 00:00:00

abstract：:Ocean currents are expected to be the predominant environmental factor influencing the dispersal of planktonic larvae or spores; yet, their characterization as predictors of marine connectivity has been hindered by a lack of understanding of how best to use oceanographic data. We used a high-resolution oceanographic m...

journal_title：Molecular ecology

authors： Alberto F,Raimondi PT,Reed DC,Watson JR,Siegel DA,Mitarai S,Coelho N,Serrão EA

更新日期：2011-06-01 00:00:00

abstract：:We analysed the polygynous mating system of the bat Saccopteryx bilineata using behaviour observations and genetic data on 11 microsatellite DNA loci. Basic social units in S. bilineata are harem groups that consist of single males and up to eight females. Colonies comprise several harem groups, and the composition of...

journal_title：Molecular ecology

authors： Heckel G,Von Helversen O

更新日期：2003-01-01 00:00:00

abstract：:Classification, phylogeography and the testing of evolutionary hypotheses rely on correct estimation of species phylogeny. Early molecular phylogenies often relied on mtDNA alone, which acts as a single linkage group with one history. Over the last decade, the use of multiple nuclear sequences has often revealed confl...

journal_title：Molecular ecology

authors： Wallis GP,Cameron-Christie SR,Kennedy HL,Palmer G,Sanders TR,Winter DJ

更新日期：2017-06-01 00:00:00

abstract：:Experimental studies of the interaction between host and symbiont in a maturing symbiotic organ have presented a challenge for most animal-bacterial associations. Advances in the rearing of the host squid Euprymna scolopes have enabled us to explore the relationship between a defect in symbiont light production and la...

journal_title：Molecular ecology

authors： Koch EJ,Miyashiro T,McFall-Ngai MJ,Ruby EG

更新日期：2014-03-01 00:00:00

abstract：:A long-standing issue in marine biology is identifying spatial scales at which populations of sessile adults are connected by planktonic offspring. We examined the genetic continuity of the acorn barnacle Balanus glandula, an abundant member of rocky intertidal communities of the northeastern Pacific Ocean, and compar...

journal_title：Molecular ecology

authors： Sotka EE,Wares JP,Barth JA,Grosberg RK,Palumbi SR

更新日期：2004-08-01 00:00:00

abstract：:MtDNA sequencing was used to investigate the genetic population structure of Litoria pearsoniana, a wet forest-restricted hylid frog, endemic to southeast Queensland and northeast New South Wales, Australia. L. pearsoniana is regarded as endangered under Queensland legislation. Significant genetic divergence among pop...

journal_title：Molecular ecology

authors： McGuigan K,McDonald K,Parris K,Moritz C

更新日期：1998-02-01 00:00:00

abstract：:The evolution of diversity in the marine ecosystem is poorly understood, given the relatively high potential for connectivity, especially for highly mobile species such as whales and dolphins. The killer whale (Orcinus orca) has a worldwide distribution, and individual social groups travel over a wide geographic range...

journal_title：Molecular ecology

authors： Moura AE,Kenny JG,Chaudhuri R,Hughes MA,J Welch A,Reisinger RR,de Bruyn PJ,Dahlheim ME,Hall N,Hoelzel AR

更新日期：2014-11-01 00:00:00

abstract：:Genes of the major histocompatibility complex (Mhc) are the most polymorphic functional loci in mammalian populations, but little is known of Mhc variability in natural populations of nonmammalian vertebrates. To help extend such studies to birds and relatives, we present a pair of degenerate primers that amplify poly...

journal_title：Molecular ecology

authors： Edwards SV,Grahn M,Potts WK

更新日期：1995-12-01 00:00:00

abstract：:We investigated the potential for gene flow and genetic assimilation via hybridization between common and rare species of the terrestrial orchid genus Liparis, focusing specifically on sympatric and allopatric populations of the common Liparis kumokiri and the rare Liparis makinoana. We utilized analyses of genetic di...

journal_title：Molecular ecology

authors： Chung MY,Nason JD,Chung MG

更新日期：2005-12-01 00:00:00

abstract：:As populations diverge many processes can shape genomic patterns of differentiation. Regions of high differentiation can arise due to divergent selection acting on selected loci, genetic hitchhiking of nearby loci, or through repeated selection against deleterious alleles (linked background selection); this divergence...

journal_title：Molecular ecology

authors： Lehnert SJ,Kess T,Bentzen P,Clément M,Bradbury IR

更新日期：2020-06-01 00:00:00

abstract：:In this study, we used a comparative genome scan to examine patterns of population differentiation with respect to host plant use in Hesperotettix viridis, a Nearctic oligophagous grasshopper locally specialized on various Asteraceae including Solidago, Gutierrezia, and Ericameria. We identified amplified fragment len...

journal_title：Molecular ecology

authors： Apple JL,Grace T,Joern A,St Amand P,Wisely SM

更新日期：2010-09-01 00:00:00

abstract：:Aspergillus flavus and A. parasiticus are the two most important aflatoxin-producing fungi responsible for the contamination of agricultural commodities worldwide. Both species are heterothallic and undergo sexual reproduction in laboratory crosses. Here we examine the possibility of interspecific matings between A. f...

journal_title：Molecular ecology

authors： Olarte RA,Worthington CJ,Horn BW,Moore GG,Singh R,Monacell JT,Dorner JW,Stone EA,Xie DY,Carbone I

更新日期：2015-04-01 00:00:00

abstract：:High-throughput sequencing approaches have enabled characterizations of the community composition of numerous gut microbial communities, which in turn has enhanced interest in their diversity and functional relationships in different groups of vertebrates. Although fishes represent the greatest taxonomic and ecologica...

journal_title：Molecular ecology

authors： Clements KD,Angert ER,Montgomery WL,Choat JH

更新日期：2014-04-01 00:00:00