These aren't the loci you'e looking for: Principles of effective SNP filtering for molecular ecologists.

abstract：:Pseudomonas fluorescens SBW25 is a Gram-negative bacterium that grows in close association with plants. In common with a broad range of functionally similar bacteria it plays an important role in the turnover of organic matter and certain isolates can promote plant growth. Despite its environmental significance, the c...

journal_title：Molecular ecology

authors： Gal M,Preston GM,Massey RC,Spiers AJ,Rainey PB

更新日期：2003-11-01 00:00:00

abstract：:Fragmentation and loss of natural habitats are recognized as major threats to contemporary flora and fauna. Detecting past or current reductions in population size is therefore a major aim in conservation genetics. Statistical methods developed to this purpose have tended to ignore the effects of spatial population st...

journal_title：Molecular ecology

authors： Leblois R,Estoup A,Streiff R

更新日期：2006-10-01 00:00:00

abstract：:Gene flow among incipient species can act as a creative or destructive force in the speciation process, generating variation on which natural selection can act while, potentially, undermining population divergence. The flowering plant genus Carex exhibits a rapid and relatively recent radiation with many species limit...

journal_title：Molecular ecology

authors： Maguilla E,Escudero M,Hipp AL,Luceño M

更新日期：2017-10-01 00:00:00

abstract：:Large-scale anthropogenic changes in the environment are reshaping global biodiversity and the evolutionary trajectory of many species. Evolutionary mechanisms that allow organisms to thrive in this rapidly changing environment are just beginning to be investigated (Hoffmann & Sgrò 2011; Colautti & Barrett 2013). Weed...

journal_title：Molecular ecology

authors： Hodgins K

更新日期：2014-05-01 00:00:00

abstract：:During the co-evolutionary arms race between plants and herbivores, insects evolved systematic adaptive plasticity to minimize the chemical defence effects of their host plants. Previous studies mainly focused on the expressional plasticity of enzymes in detoxification and digestion. However, the expressional response...

journal_title：Molecular ecology

authors： Li X,Shi L,Dai X,Chen Y,Xie H,Feng M,Chen Y,Wang H

更新日期：2018-07-01 00:00:00

abstract：:The level of integration between associated partners can range from ectosymbioses to extracellular and intracellular endosymbioses, and this range has been assumed to reflect a continuum from less intimate to evolutionarily highly stable associations. In this study, we examined the specificity and evolutionary history...

journal_title：Molecular ecology

authors： Zimmermann J,Wentrup C,Sadowski M,Blazejak A,Gruber-Vodicka HR,Kleiner M,Ott JA,Cronholm B,De Wit P,Erséus C,Dubilier N

更新日期：2016-07-01 00:00:00

abstract：:There is a growing consensus that much of the contemporary phylogeography of northern hemisphere coastal taxa reflects the impact of Pleistocene glaciation, when glaciers covered much of the coastline at higher latitudes and sea levels dropped by as much as 150 m. The genetic signature of postglacial recolonization ha...

journal_title：Molecular ecology

authors： Wilson AB,Eigenmann Veraguth I

更新日期：2010-10-01 00:00:00

abstract：:Genetic subdivision in local populations of the European house mice, Mus musculus domesticus and M. m. musculus, was analysed to study patterns of gene flow. The data consisted of frequencies of microsatellite alleles in 16 samples (250 individuals) from a total of 11 sites in Jutland, which included successive sample...

journal_title：Molecular ecology

authors： Dallas JF,Dod B,Boursot P,Prager EM,Bonhomme F

更新日期：1995-06-01 00:00:00

abstract：:Photosynthetic tissues, the major food source of many invertebrates and vertebrates, are well defended. Many defence traits in leaves are controlled via the jasmonate signalling pathway in which jasmonate acts as a hormone by binding to a receptor to activate responses that lead to increased resistance to invertebrate...

journal_title：Molecular ecology

authors： Mafli A,Goudet J,Farmer EE

更新日期：2012-05-01 00:00:00

abstract：:Instances of hybridization between endemic and alien species pose a threat to species integrity but also provide us with an opportunity to study the dynamics of gene flow between two species as they first meet. Here, we used variation at 22 highly differentiated microsatellite loci and one mitochondrial DNA (mtDNA) ma...

journal_title：Molecular ecology

authors： Senn HV,Pemberton JM

更新日期：2009-03-01 00:00:00

abstract：:Phylogeographic patterns in Macrodon ancylodon sampled from 12 locations across all its range were investigated using mitochondrial DNA cytochrome b sequences, and analysed together with patterns of morphometric differentiation. Populations of the North Brazil and the Brazil currents, with warmer waters, form a clade ...

journal_title：Molecular ecology

authors： Santos S,Hrbek T,Farias IP,Schneider H,Sampaio I

更新日期：2006-12-01 00:00:00

abstract：:A half century ago the State of Hawaii began a remarkable, if unintentional, experiment on the population genetics of introduced species, by releasing 2431 Bluestriped Snappers (Lutjanus kasmira) from the Marquesas Islands in 1958 and 728 conspecifics from the Society Islands in 1961. By 1992 L. kasmira had spread acr...

journal_title：Molecular ecology

authors： Gaither MR,Bowen BW,Toonen RJ,Planes S,Messmer V,Earle J,Ross Robertson D

更新日期：2010-03-01 00:00:00

abstract：:DNA sequence studies frequently reveal evidence of cryptic lineages in morphologically uniform species, many of which turn out to be evolutionarily distinct species. The Common Raven (Corvus corax) includes two deeply divergent mtDNA lineages: one lineage seems restricted to western North America and the other is Hola...

journal_title：Molecular ecology

authors： Webb WC,Marzluff JM,Omland KE

更新日期：2011-06-01 00:00:00

abstract：:Arbuscular mycorrhizal fungi (AMF) form a mutualistic symbiosis with plant roots and are found in most ecosystems. In this study the community structure of AMF in a clade of the genus Glomus was examined in undisturbed costal grassland using LSU rDNA sequences amplified from roots of Hieracium pilosella. Roots were sa...

journal_title：Molecular ecology

authors： Rosendahl S,Stukenbrock EH

更新日期：2004-10-01 00:00:00

abstract：:Population decline in the federally endangered June sucker (Chasmistes liorus), a lakesucker unique to Utah Lake, Utah, has been attributed in part to hybridization with the more widespread Utah sucker (Catostomus ardens). As a group, suckers in Utah Lake exhibit considerable external morphological variation. Meristic...

journal_title：Molecular ecology

authors： Cole DD,Mock KE,Cardall BL,Crowl TA

更新日期：2008-12-01 00:00:00

abstract：:Whether alpine plant species survived Pleistocene glaciations in situ on high alpine nunatak mountains is still under debate. To test this hypothesis, Senecio halleri, a high alpine and endemic species with a narrow distribution range in the European Alps, was chosen as a model organism. Polymerase chain reaction-rest...

journal_title：Molecular ecology

authors： Bettin O,Cornejo C,Edwards PJ,Holderegger R

更新日期：2007-06-01 00:00:00

abstract：:Understanding the spatial scale at which selection acts upon adaptive genetic variation in natural populations is fundamental to our understanding of evolutionary ecology, and has important ramifications for conservation. The environmental factors to which individuals of a population are exposed can vary at fine spati...

journal_title：Molecular ecology

authors： Gonzalez-Quevedo C,Davies RG,Phillips KP,Spurgin LG,Richardson DS

更新日期：2016-09-01 00:00:00

abstract：:Dispersal is a key biological process serving several functions including connectivity among populations. Habitat fragmentation caused by natural or anthropogenic structures may hamper dispersal, thereby disrupting genetic connectivity. Investigating factors affecting dispersal and gene flow is important in the curren...

journal_title：Molecular ecology

authors： Trense D,Schmidt TL,Yang Q,Chung J,Hoffmann AA,Fischer K

更新日期：2020-10-27 00:00:00

abstract：:Extra-pair copulations (EPCs; copulations outside the pair bond) are widespread in birds and may result in extra-pair fertilizations (EPFs). To increase reproductive success, males should not only seek to gain EPFs, but also prevent their own females from gaining EPFs. Although males could reduce the number of EPCs by...

journal_title：Molecular ecology

authors： Komdeur J,Burke T,Richardson DS

更新日期：2007-09-01 00:00:00

abstract：:During the process of ecological speciation, reproductive isolation results from divergent natural selection and leads to a positive correlation between genetic divergence and adaptive phenotypic divergence, that is, isolation by adaptation (IBA). In natural populations, phenotypic differentiation is often autocorrela...

journal_title：Molecular ecology

authors： Seeholzer GF,Brumfield RT

更新日期：2018-01-01 00:00:00

abstract：:The landscape of the Pilbara region of Western Australia has been relatively unchanged for 100 million years. The ancient river systems of this region might be expected to be sources of isolation and divergence for aquatic species. Hence, the occurrence of widespread groundwater taxa in this landscape offers the oppor...

journal_title：Molecular ecology

authors： Finston TL,Johnson MS,Humphreys WF,Eberhard SM,Halse SA

更新日期：2007-01-01 00:00:00

abstract：:The savannah biome of sub-Saharan Africa harbours the highest diversity of ungulates (hoofed mammals) on Earth. In this review, we compile population genetic data from 19 codistributed ungulate taxa of the savannah biome and find striking concordance in the phylogeographic structuring of species. Data from across taxa...

journal_title：Molecular ecology

authors： Lorenzen ED,Heller R,Siegismund HR

更新日期：2012-08-01 00:00:00

abstract：:Ectomycorrhizal (EcM) fungal communities may be shaped by both deterministic and stochastic processes, potentially influencing ecosystem development and function. We evaluated community assembly processes for EcM fungi of Pseudotsuga menziesii among 12 sites up to 400 km apart in southwest British Columbia (Canada) by...

journal_title：Molecular ecology

authors： Kranabetter JM,Hawkins BJ,Jones MD,Robbins S,Dyer T,Li T

更新日期：2015-12-01 00:00:00

abstract：:Investigating how environmental features shape the genetic structure of populations is crucial for understanding how they are potentially adapted to their habitats, as well as for sound management. In this study, we assessed the relative importance of spatial distribution, ocean currents and sea surface temperature (S...

journal_title：Molecular ecology

authors： Benestan L,Quinn BK,Maaroufi H,Laporte M,Clark FK,Greenwood SJ,Rochette R,Bernatchez L

更新日期：2016-10-01 00:00:00

abstract：:Crossing over is well known to have profound effects on patterns of genetic diversity and genome evolution. Far less direct attention has been paid to another distinct outcome of meiotic recombination: noncrossover gene conversion (NCGC). Crossing over and NCGC both shuffle combinations of alleles, and this degradatio...

journal_title：Molecular ecology

authors： Korunes KL,Noor MA

更新日期：2017-01-01 00:00:00

abstract：:The carabid beetle Pterostichus melanarius is a major natural enemy of pests, such as aphids and slugs in agricultural systems. Earthworms are a dominant non-pest component of the diet of P. melanarius which help sustain the beetles during periods when the pest population is low or absent. In this study we wanted to t...

journal_title：Molecular ecology

authors： King RA,Vaughan IP,Bell JR,Bohan DA,Symondson WO

更新日期：2010-04-01 00:00:00

abstract：:Spatial and environmental heterogeneity are major factors in structuring species distributions in alpine landscapes. These landscapes have also been affected by glacial advances and retreats, causing alpine taxa to undergo range shifts and demographic changes. These nonequilibrium population dynamics have the potentia...

journal_title：Molecular ecology

authors： Schoville SD,Lam AW,Roderick GK

更新日期：2012-09-01 00:00:00

abstract：:Parallel patterns of adaptive divergence and speciation are cited as powerful evidence for the role of selection driving these processes. However, it is often not clear whether parallel phenotypic divergence is underlain by parallel genetic changes. Here, we asked about the genetic basis of parallel divergence in the ...

journal_title：Molecular ecology

authors： Westram AM,Galindo J,Alm Rosenblad M,Grahame JW,Panova M,Butlin RK

更新日期：2014-09-01 00:00:00

abstract：:Parents can have profound effects on offspring fitness. Little, however, is known about the mechanisms through which parental genetic variation influences offspring physiology in natural systems. White-throated sparrows (Zonotrichia albicollis, WTSP) exist in two genetic morphs, tan and white, controlled by a large po...

journal_title：Molecular ecology

authors： Newhouse DJ,Barcelo-Serra M,Tuttle EM,Gonser RA,Balakrishnan CN

更新日期：2019-09-01 00:00:00

abstract：:Nested clade phylogeographic analysis (NCPA) has become a popular method for reconstructing the history of populations across species ranges. Ever since its invention in 1995, criticisms have been formulated, but the method, which has been regularly updated, continues to attract investigators. Molecular Ecology has pu...

journal_title：Molecular ecology

authors： Petit RJ

更新日期：2008-01-01 00:00:00