The coup de grâce for the nested clade phylogeographic analysis?

abstract：:Amphibians are a globally distributed and diverse lineage, but much of our current understanding of their population genetic structure comes from studies in mesic temperate habitats. We characterize the population genetic structure of two sympatric explosive breeding amphibians in the southwestern deserts of the Unite...

journal_title：Molecular ecology

authors： Chan LM,Zamudio KR

更新日期：2009-08-01 00:00:00

abstract：:Widely distributed taxa provide an opportunity to compare biogeographic responses to climatic fluctuations on multiple continents and to investigate speciation. We conducted the most geographically and genomically comprehensive study to date of the red fox (Vulpes vulpes), the world's most widely distributed wild terr...

journal_title：Molecular ecology

authors： Statham MJ,Murdoch J,Janecka J,Aubry KB,Edwards CJ,Soulsbury CD,Berry O,Wang Z,Harrison D,Pearch M,Tomsett L,Chupasko J,Sacks BN

更新日期：2014-10-01 00:00:00

abstract：:The microbiomes of rhizocompartments (nodule endophytes, root endophytes, rhizosphere and root zone) in soya bean and alfalfa were analysed using high-throughput sequencing to investigate the interactions among legume species, microorganisms and soil types. A clear hierarchical filtration of microbiota by plants was o...

journal_title：Molecular ecology

authors： Xiao X,Chen W,Zong L,Yang J,Jiao S,Lin Y,Wang E,Wei G

更新日期：2017-03-01 00:00:00

abstract：:We assessed genetic differentiation and diversity in 14 populations of sika deer (Cervus nippon) from Japan and four populations of sika deer introduced to the UK, using nine microsatellite loci. We observed extreme levels of differentiation and significant differences in diversity between populations. Our results do ...

journal_title：Molecular ecology

authors： Goodman SJ,Tamate HB,Wilson R,Nagata J,Tatsuzawa S,Swanson GM,Pemberton JM,McCullough DR

更新日期：2001-06-01 00:00:00

abstract：:Microbiologists often evaluate microbial community dynamics by formulating functional hypotheses based on ecological processes. Indeed, many of the methods and terms currently used to describe animal microbiomes derive from ecology and evolutionary biology. As our understanding of the composition and functional dynami...

journal_title：Molecular ecology

authors： McKenney EA,Koelle K,Dunn RR,Yoder AD

更新日期：2018-04-01 00:00:00

abstract：:Investigating how environmental features shape the genetic structure of populations is crucial for understanding how they are potentially adapted to their habitats, as well as for sound management. In this study, we assessed the relative importance of spatial distribution, ocean currents and sea surface temperature (S...

journal_title：Molecular ecology

authors： Benestan L,Quinn BK,Maaroufi H,Laporte M,Clark FK,Greenwood SJ,Rochette R,Bernatchez L

更新日期：2016-10-01 00:00:00

abstract：:Diversification and speciation of terrestrial organisms are anticipated in oceanic islands such as Macaronesia, a group of Atlantic islands that have remained unconnected to continental landmasses. Hitherto, the diversification of marine organisms in oceanic islands, especially those with low vagility, has received li...

journal_title：Molecular ecology

authors： Vieira PE,Desiderato A,Holdich DM,Soares P,Creer S,Carvalho GR,Costa FO,Queiroga H

更新日期：2019-04-01 00:00:00

abstract：:Anthropogenic habitat fragmentation of species that live in naturally patchy metapopulations such as mountaintops or sky islands experiences two levels of patchiness. Effects of such multilevel patchiness on species have rarely been examined. Metapopulation theory suggests that patchy habitats could have varied impact...

journal_title：Molecular ecology

authors： Robin VV,Gupta P,Thatte P,Ramakrishnan U

更新日期：2015-07-01 00:00:00

abstract：:In polygyne ants (multiple queens per colony) factors that affect the distribution and survival of queens may play a key role in shaping the population-wide mating system and colony kin structure. The aim of this paper was to study the breeding system in two populations of different age in the facultatively polygyne a...

journal_title：Molecular ecology

authors： Hannonen M,Helanterä H,Sundström L

更新日期：2004-06-01 00:00:00

abstract：:We estimated the rate of extra-pair fertilizations (EPFs) in waved albatrosses (Phoebastria irrorata) on Isla Española, Galápagos, Ecuador, using multilocus minisatellite DNA fingerprinting. Waved albatrosses are socially monogamous, long-lived seabirds whose main population is on Española. Aggressive extra-pair copul...

journal_title：Molecular ecology

authors： Huyvaert KP,Anderson DJ,Jones TC,Duan W,Parker PG

更新日期：2000-09-01 00:00:00

abstract：:Coenagrion mercuriale (Charpentier) (Odonata: Zygoptera) is one of Europe's most threatened damselflies and is listed in the European Habitats directive. We combined an intensive mark-release-recapture (MRR) study with a microsatellite-based genetic analysis for C. mercuriale from the Itchen Valley, UK, as part of an ...

journal_title：Molecular ecology

authors： Watts PC,Rouquette JR,Saccheri IJ,Kemp SJ,Thompson DJ

更新日期：2004-10-01 00:00:00

abstract：:Inversion polymorphisms are responsible for many ecologically important phenotypes and are often found under balancing selection. However, the same features that ensure their large role in local adaptation-especially reduced recombination between alternate arrangements-mean that uncovering the precise loci within inve...

journal_title：Molecular ecology

authors： Ayala D,Zhang S,Chateau M,Fouet C,Morlais I,Costantini C,Hahn MW,Besansky NJ

更新日期：2019-03-01 00:00:00

abstract：:Defence against pathogenic infection can take two forms: resistance and tolerance. Resistance is the ability of the host to limit a pathogen burden, whereas tolerance is the ability to limit the negative consequences of infection at a given level of infection intensity. Evolutionarily, a tolerance strategy that is ind...

journal_title：Molecular ecology

authors： Howick VM,Lazzaro BP

更新日期：2017-03-01 00:00:00

abstract：:Understanding the evolutionary consequences of human-mediated introductions of domesticated strains into the wild and their subsequent admixture with natural populations is of major concern in conservation biology. However, the genomic impacts of stocking from distinct sources (locally derived vs. divergent) on the ge...

journal_title：Molecular ecology

authors： Leitwein M,Gagnaire PA,Desmarais E,Berrebi P,Guinand B

更新日期：2018-09-01 00:00:00

abstract：:The opportunity for a mutation to invade a population can dramatically vary depending on the context in which this mutation occurs. Such context dependence is difficult to document as it requires the ability to measure how a mutation affects phenotypes and fitness and to manipulate the context in which the mutation oc...

journal_title：Molecular ecology

authors： Le Gac M,Doebeli M

更新日期：2010-06-01 00:00:00

abstract：:Immune responses evolve to balance the benefits of microbial killing against the costs of autoimmunity and energetic resource use. Models that explore the evolution of optimal immune responses generally include a term for constitutive immunity, or the level of immunological investment prior to microbial exposure, and ...

journal_title：Molecular ecology

authors： Jent D,Perry A,Critchlow J,Tate AT

更新日期：2019-12-01 00:00:00

abstract：:Transgenic plants expressing resistance to herbivorous insects may represent a safe and sustainable pest control alternative if they do not interfere with the natural enemies of target pests. Here we examined interactions between oryzacystatin I (OCI), a proteinase inhibitor from rice genetically engineered into potat...

journal_title：Molecular ecology

authors： Bouchard E,Michaud D,Cloutier C

更新日期：2003-09-01 00:00:00

abstract：:A new polymerase chain reaction-based screening method for microsatellites is presented. Using this method, we isolated 12 microsatellite loci from Drosophila buzzatii, two of which were X-linked. We applied the other 10 microsatellite loci to the analysis of genetic variation in five natural populations of D. buzzati...

journal_title：Molecular ecology

authors： Frydenberg J,Pertoldi C,Dahlgaard J,Loeschcke V

更新日期：2002-02-01 00:00:00

abstract：:Phylogeography of Rice yellow mottle virus (RYMV) was reconstructed from the coat protein gene sequences of a selection of 173 isolates from the 14 countries of mainland Africa where the disease occurred and from the full sequences of 16 representative isolates. Genetic variation was linked to geographical distributio...

journal_title：Molecular ecology

authors： Traore O,Sorho F,Pinel A,Abubakar Z,Banwo O,Maley J,Hebrard E,Winter S,Sere Y,Konate G,Fargette D

更新日期：2005-06-01 00:00:00

abstract：:The expansion–contraction (EC) model predicts demographic and range contraction of temperate species during Pleistocene glaciations as a consequence of climate-related habitat changes, and provides a paradigm for explaining the high intraspecific diversity found in refugia in terms of long-term demographic stability. ...

journal_title：Molecular ecology

authors： Salvi D,Schembri PJ,Sciberras A,Harris DJ

更新日期：2014-03-01 00:00:00

abstract：:The ecosystem service of insect pest regulation by natural enemies, such as primary parasitoids, may be enhanced by the presence of uncultivated, semi-natural habitats within agro-ecosystems, although quantifying such host-parasitoid interactions is difficult. Here, we use rRNA 16S gene sequencing to assess both the l...

journal_title：Molecular ecology

authors： Derocles SA,Le Ralec A,Besson MM,Maret M,Walton A,Evans DM,Plantegenest M

更新日期：2014-08-01 00:00:00

abstract：:Genetic rescue is an increasingly considered conservation measure to address genetic erosion associated with habitat loss and fragmentation. The resulting gene flow from facilitating migration may improve fitness and adaptive potential, but is not without risks (e.g., outbreeding depression). Here, we conducted a test...

journal_title：Molecular ecology

authors： Robinson ZL,Coombs JA,Hudy M,Nislow KH,Letcher BH,Whiteley AR

更新日期：2017-09-01 00:00:00

abstract：:The major aim of this study was to compare the phylogeographic patterns of codistributed bats and small nonvolant Neotropical mammals. Cytochrome b sequences (mitochondrial DNA) were obtained for a total of 275 bats representing 17 species. The tissue samples were collected in coastal Brazil, and were available from M...

journal_title：Molecular ecology

authors： Ditchfield AD

更新日期：2000-09-01 00:00:00

abstract：:SSCP (single-strand conformational polymorphism) is used widely in the field of human biomedicine, but its potential as a population genetics tool for the recovery of nuclear gene genealogies remains to be realized. We describe and illustrate a use for SSCP in the physical isolation of nuclear haplotypes that circumve...

journal_title：Molecular ecology

authors： Ortí G,Hare MP,Avise JC

更新日期：1997-06-01 00:00:00

abstract：:Hybrid zones are important windows into ecological and evolutionary processes. Our understanding of the significance and prevalence of hybridization in nature has expanded with the generation and analysis of genome-spanning data sets. That said, most hybridization research still has restricted temporal and spatial res...

journal_title：Molecular ecology

authors： Stewart KA,Taylor SA

更新日期：2020-08-01 00:00:00

abstract：:Knowledge of the role of landscapes in shaping genetic connectivity and divergence is essential for understanding patterns of biogeography and diversity. This is particularly relevant for the Andes region, a major biodiversity hotspot of relatively recent origin. We examined the phylogeography and landscape genetics o...

journal_title：Molecular ecology

authors： Trénel P,Hansen MM,Normand S,Borchsenius F

更新日期：2008-08-01 00:00:00

abstract：:Aspergillus flavus and A. parasiticus are the two most important aflatoxin-producing fungi responsible for the contamination of agricultural commodities worldwide. Both species are heterothallic and undergo sexual reproduction in laboratory crosses. Here we examine the possibility of interspecific matings between A. f...

journal_title：Molecular ecology

authors： Olarte RA,Worthington CJ,Horn BW,Moore GG,Singh R,Monacell JT,Dorner JW,Stone EA,Xie DY,Carbone I

更新日期：2015-04-01 00:00:00

abstract：:Mitochondrial DNA control region sequences and seven microsatellites were used to estimate the genetic structuring, evolutionary history and historic migration patterns of the kob antelope (Kobus kob). Ten populations were analysed, representing the three recognized K. kob subspecies: K. k. kob in west Africa, K. k. t...

journal_title：Molecular ecology

authors： Lorenzen ED,De Neergaard R,Arctander P,Siegismund HR

更新日期：2007-08-01 00:00:00

abstract：:Multiple introductions are key features for the establishment and persistence of introduced species. However, little is known about the contribution of genetic admixture to the invasive potential of populations. To address this issue, we studied the recent invasion of the Asian tiger mosquito (Aedes albopictus) in Eur...

journal_title：Molecular ecology

authors： Sherpa S,Blum MGB,Capblancq T,Cumer T,Rioux D,Després L

更新日期：2019-05-01 00:00:00

abstract：:Implementation of the coalescent model in a Bayesian framework is an emerging strength in genetically based species delimitation studies. By providing an objective measure of species diagnosis, these methods represent a quantitative enhancement to the analysis of multilocus data, and complement more traditional method...

journal_title：Molecular ecology

authors： Hotaling S,Foley ME,Lawrence NM,Bocanegra J,Blanco MB,Rasoloarison R,Kappeler PM,Barrett MA,Yoder AD,Weisrock DW

更新日期：2016-05-01 00:00:00