Persistent and transient replication of full-length hepatitis C virus genomes in cell culture.

Abstract:

:The recently developed subgenomic hepatitis C virus (HCV) replicons were limited by the fact that the sequence encoding the structural proteins was missing. Therefore, important information about a possible influence of these proteins on replication and pathogenesis and about the mechanism of virus formation could not be obtained. Taking advantage of three cell culture-adaptive mutations that enhance RNA replication synergistically, we generated selectable full-length HCV genomes that amplify to high levels in the human hepatoma cell line Huh-7 and can be stably propagated for more than 6 months. The structural proteins are efficiently expressed, with the viral glycoproteins E1 and E2 forming heterodimers which are stable under nondenaturing conditions. No disulfide-linked glycoprotein aggregates were observed, suggesting that the envelope proteins fold productively. Electron microscopy studies indicate that cell lines harboring these full-length HCV RNAs contain lipid droplets. The majority of the core protein was found on the surfaces of these structures, whereas the glycoproteins appear to localize to the endoplasmic reticulum and cis-Golgi compartments. In agreement with this distribution, no endoglycosidase H-resistant forms of these proteins were detectable. In a search for the production of viral particles, we noticed that these cells release substantial amounts of nuclease-resistant HCV RNA-containing structures with a buoyant density of 1.04 to 1.1 g/ml in iodixanol gradients. The same observation was made in transient-replication assays using an authentic highly adapted full-length HCV genome that lacks heterologous sequences. However, the fact that comparable amounts of such RNA-containing structures were found in the supernatant of cells carrying subgenomic replicons demonstrates a nonspecific release independent of the presence of the structural proteins. These results suggest that Huh-7 cells lack host cell factors that are important for virus particle assembly and/or release.

journal_name

J Virol

journal_title

Journal of virology

authors

Pietschmann T,Lohmann V,Kaul A,Krieger N,Rinck G,Rutter G,Strand D,Bartenschlager R

doi

10.1128/jvi.76.8.4008-4021.2002

subject

Has Abstract

pub_date

2002-04-01 00:00:00

pages

4008-21

issue

8

eissn

0022-538X

issn

1098-5514

journal_volume

76

pub_type

杂志文章
  • Simian Immunodeficiency Virus Vif and Human APOBEC3B Interactions Resemble Those between HIV-1 Vif and Human APOBEC3G.

    abstract::Several members of the APOBEC3 DNA cytosine deaminase family can potently inhibit Vif-deficient human immunodeficiency virus type 1 (HIV-1) by catalyzing cytosine deamination in viral cDNA and impeding reverse transcription. HIV-1 counteracts restriction with the virally encoded Vif protein, which targets relevant APO...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00447-18

    authors: Wang J,Shaban NM,Land AM,Brown WL,Harris RS

    更新日期:2018-05-29 00:00:00

  • Mapping and functional analysis of interaction sites within the cytoplasmic domains of the vaccinia virus A33R and A36R envelope proteins.

    abstract::Incorporation of the vaccinia virus A36R protein into the outer membrane of intracellular enveloped virions (IEV) is dependent on expression of the A33R protein. Possible interactions of the 200-amino-acid cytoplasmic domain of the A36R protein with itself or with the cytoplasmic domain of the A33R, A34R, B5R, or F12L...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.77.7.4113-4126.2003

    authors: Ward BM,Weisberg AS,Moss B

    更新日期:2003-04-01 00:00:00

  • Lipofection of purified adeno-associated virus Rep68 protein: toward a chromosome-targeting nonviral particle.

    abstract::Adeno-associated virus (AAV) integrates very efficiently into a specific site (AAVS1) of human chromosome 19. Two elements of the AAV genome are sufficient: the inverted terminal repeats (ITRs) and the Rep78 or Rep68 protein. The incorporation of the AAV integration machinery in nonviral delivery systems is of great i...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.72.9.7653-7658.1998

    authors: Lamartina S,Roscilli G,Rinaudo D,Delmastro P,Toniatti C

    更新日期:1998-09-01 00:00:00

  • Characterization of infectious hematopoietic necrosis virus mRNA species reveals a nonvirion rhabdovirus protein.

    abstract::The genome RNA and six mRNA species of infectious hematopoietic necrosis virus were analyzed by denaturing gel electrophoresis. The following molecular weights were determined: genome RNA, 3.7 X 10(6); mRNA 1, 2.26 X 10(6); mRNA 2, 5.63 X 10(5); mRNA 3, 4.84 X 10(5); mRNA 4 (containing two different mRNA species), 3.0...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.53.2.462-468.1985

    authors: Kurath G,Leong JC

    更新日期:1985-02-01 00:00:00

  • Errant processing and structural alterations of genomes present in a varicella-zoster virus vaccine.

    abstract::Five minority populations of aberrant, varicella-zoster virus (VZV)-derived genomes were identified among the encapsidated DNAs obtained from the nuclear and cytoplasmic fractions of an in vitro infection initiated with a lyophilized sample of the BIKEN VZV vaccine (strain Oka). These were (i) VZV genomes, present wit...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.56.1.92-101.1985

    authors: Vlazny DA,Hyman RW

    更新日期:1985-10-01 00:00:00

  • Identification of an RNA hairpin in poliovirus RNA that serves as the primary template in the in vitro uridylylation of VPg.

    abstract::The first step in the replication of the plus-stranded poliovirus RNA is the synthesis of a complementary minus strand. This process is initiated by the covalent attachment of UMP to the terminal protein VPg, yielding VPgpU and VPgpUpU. We have previously shown that these products can be made in vitro in a reaction th...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.74.22.10359-10370.2000

    authors: Paul AV,Rieder E,Kim DW,van Boom JH,Wimmer E

    更新日期:2000-11-01 00:00:00

  • Unification of the globally distributed spindle-shaped viruses of the Archaea.

    abstract::Viruses with spindle-shaped virions are abundant in diverse environments. Over the years, such viruses have been isolated from a wide range of archaeal hosts. Evolutionary relationships between them remained enigmatic, however. Here, using structural proteins as markers, we define familial ties among these "dark horse...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.02941-13

    authors: Krupovic M,Quemin ER,Bamford DH,Forterre P,Prangishvili D

    更新日期:2014-02-01 00:00:00

  • IRF-3 activation by Sendai virus infection is required for cellular apoptosis and avoidance of persistence.

    abstract::Here, we report that specific manipulations of the cellular response to virus infection can cause prevention of apoptosis and consequent establishment of persistent infection. Infection of several human cell lines with Sendai virus (SeV) or human parainfluenza virus 3, two prototypic paramyxoviruses, caused slow apopt...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.02536-07

    authors: Peters K,Chattopadhyay S,Sen GC

    更新日期:2008-04-01 00:00:00

  • Cytolytic T-lymphocyte responses to respiratory syncytial virus: effector cell phenotype and target proteins.

    abstract::Cytolytic T-lymphocyte (CTL) activity specific for respiratory syncytial (RS) virus was investigated after intranasal infection of mice with RS virus, after intraperitoneal infection of mice with a recombinant vaccinia virus expressing the F glycoprotein, and after intramuscular vaccination of mice with Formalin-inact...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.64.9.4232-4241.1990

    authors: Nicholas JA,Rubino KL,Levely ME,Adams EG,Collins PL

    更新日期:1990-09-01 00:00:00

  • Glycosylation of vesicular stomatitis virus glycoprotein in virus-infected HeLa cells.

    abstract::Glycosylation of the envelope glycoprotein of vesicular stomatitis virus was examined using virus-infected HeLa cells that were pulse-labeled with radioactive sugar precursors. The intracellular sites of glycosylation and the stepwise elongation of the carbohydrate side chains of the G protein were monitored by membra...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.20.3.646-657.1976

    authors: Hunt LA,Summers DF

    更新日期:1976-12-01 00:00:00

  • Oxidative stress induces reactivation of Kaposi's sarcoma-associated herpesvirus and death of primary effusion lymphoma cells.

    abstract::Kaposi's sarcoma (KS) and primary effusion lymphoma (PEL) cells are predominantly infected with latent Kaposi's sarcoma-associated herpesvirus (KSHV), presenting a barrier to the destruction of tumor cells. Latent KSHV can be reactivated to undergo lytic replication. Here we report that in PEL cells, oxidative stress ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.01742-10

    authors: Li X,Feng J,Sun R

    更新日期:2011-01-01 00:00:00

  • Proton Channel Activity of Influenza A Virus Matrix Protein 2 Contributes to Autophagy Arrest.

    abstract::Influenza A virus infection can arrest autophagy, as evidenced by autophagosome accumulation in infected cells. Here, we report that this autophagosome accumulation can be inhibited by amantadine, an antiviral proton channel inhibitor, in amantadine-sensitive virus infected cells or cells expressing influenza A virus ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00576-15

    authors: Ren Y,Li C,Feng L,Pan W,Li L,Wang Q,Li J,Li N,Han L,Zheng X,Niu X,Sun C,Chen L

    更新日期:2015-10-14 00:00:00

  • Elevated chemokine responses are maintained in lungs after clearance of viral infection.

    abstract::We observed two patterns of chemokine expression in the lungs of mice infected with murine gammaherpesvirus 68: peaks of chemokine expression correlated with or occurred after the peak of viral gene expression. Chemokine expression remained elevated through 29 days postinfection. ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.76.20.10518-10523.2002

    authors: Weinberg JB,Lutzke ML,Efstathiou S,Kunkel SL,Rochford R

    更新日期:2002-10-01 00:00:00

  • Hematopoietic target cells of anemogenic subgroup C versus nonanemogenic subgroup A feline leukemia virus.

    abstract::Feline leukemia viruses (FeLVs) belonging to interference subgroup C induce fatal anemia resembling human pure red cell aplasia (PRCA). Subgroup A FeLVs, although closely related genetically to FeLVs of subgroup C, do not induce PRCA. The determinants for PRCA induction by a molecularly cloned prototype subgroup C vir...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.66.9.5561-5568.1992

    authors: Dean GA,Groshek PM,Mullins JI,Hoover EA

    更新日期:1992-09-01 00:00:00

  • Neuronal Subtype Determines Herpes Simplex Virus 1 Latency-Associated-Transcript Promoter Activity during Latency.

    abstract::Herpes simplex virus (HSV) latency in neurons remains poorly understood, and the heterogeneity of the sensory nervous system complicates mechanistic studies. In this study, we used primary culture of adult trigeminal ganglion (TG) mouse neurons in microfluidic devices and an in vivo model to examine the subtypes of se...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00430-18

    authors: Cabrera JR,Charron AJ,Leib DA

    更新日期:2018-06-13 00:00:00

  • Disruption of microtubule organization and centrosome function by expression of tobacco mosaic virus movement protein.

    abstract::The movement protein (MP) of Tobacco mosaic virus mediates the cell-to-cell transport of viral RNA through plasmodesmata, cytoplasmic cell wall channels for direct cell-to-cell communication between adjacent cells. Previous in vivo studies demonstrated that the RNA transport function of the protein correlates with its...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00254-06

    authors: Ferralli J,Ashby J,Fasler M,Boyko V,Heinlein M

    更新日期:2006-06-01 00:00:00

  • Stimulation of growth rate of chondrocytes by Rous sarcoma virus is not coordinated with other expressions of the src gene phenotype.

    abstract::Infection and transformation of chondrocytes by Rous sarcoma viruses (RSVs) (Schmidt-Ruppin, Prague) stimulated the rate of cell growth. In contrast, several transformation-defective (td) mutants (tdPRA, tdNY105, tdNY106, tdNY107, and tdNY108) retaining various sizes of the src gene did not stimulate cell growth, indi...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.35.2.531-541.1980

    authors: Tanaka A,Parker C,Kaji A

    更新日期:1980-08-01 00:00:00

  • Comparison of membrane protein glycopeptides of Sindbis virus and vesicular stomatitis virus.

    abstract::A comparison has been made of the membrane glycoproteins and glycopeptides from two enveloped viruses, Sindbis virus and vesicular stomatitis virus (VSV). Glycopeptides isolated from Sindbis virus and VSV grown in the same host appear to differ principally in the number of sialic acid residues per glycopeptide; when s...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.6.2.176-182.1970

    authors: Burge BW,Huang AS

    更新日期:1970-08-01 00:00:00

  • Mutations in active-site residues of the uracil-DNA glycosylase encoded by vaccinia virus are incompatible with virus viability.

    abstract::The D4R gene of vaccinia virus encodes a functional uracil-DNA glycosylase that is essential for viral viability (D. T. Stuart, C. Upton, M. A. Higman, E. G. Niles, and G. McFadden, J. Virol. 67:2503-2513, 1993), and a D4R mutant, ts4149, confers a conditional lethal defect in viral DNA replication (A. K. Millns, M. S...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.70.11.7965-7973.1996

    authors: Ellison KS,Peng W,McFadden G

    更新日期:1996-11-01 00:00:00

  • Fate of infecting simian virus 40-deoxyribonucleic acid in nonpermissive cells: integration into host deoxyribonucleic acid.

    abstract::Nonpermissive 3T3 cells were infected with purified superhelical simian virus 40 (SV40) deoxyribonucleic acid I (DNA I). One hour after infection, approximately 60% of the intracellular SV40 DNA was converted to relaxed forms. One day after infection, all intracellular SV40 DNA was present as slow-sedimenting material...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.10.3.425-432.1972

    authors: Collins CJ,Sauer G

    更新日期:1972-09-01 00:00:00

  • cdc2/cyclin B1-dependent phosphorylation of EBNA2 at Ser243 regulates its function in mitosis.

    abstract::Epstein-Barr virus (EBV) nuclear antigen 2 (EBNA2) transactivates EBV genes in latently infected B cells. We have shown that mitotic hyperphosphorylation of EBNA2 suppresses its ability to transactivate the latent membrane protein 1 (LMP1) promoter. In this follow-up study, we identify EBNA2 Ser243 as a phosphorylatio...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.80.4.2045-2050.2006

    authors: Yue W,Shackelford J,Pagano JS

    更新日期:2006-02-01 00:00:00

  • Functional interactions of the simian virus 40 core origin of replication with flanking regulatory sequences.

    abstract::We constructed a matched set of plasmids to investigate the interactions of essential core sequences of the simian virus 40 replication origin with flanking regulatory sequences. Deletions of either T-antigen-binding region I or the 21-base-pair repeated promoter elements reduced replication to 50 to 70% of wild-type ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.57.1.138-144.1986

    authors: DeLucia AL,Deb S,Partin K,Tegtmeyer P

    更新日期:1986-01-01 00:00:00

  • The alkylated imino sugar, n-(n-Nonyl)-deoxygalactonojirimycin, reduces the amount of hepatitis B virus nucleocapsid in tissue culture.

    abstract::n-(n-Nonyl)-deoxygalactonojirimycin (n,n-DGJ), an alkylated imino sugar, reduces the amount of HBV DNA produced within the stably transfected HBV-producing HepG2.2.15 line in culture and is under consideration for development as a human therapeutic. n,n-DGJ does not appear to inhibit HBV DNA polymerase activity or env...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.77.22.11933-11940.2003

    authors: Lu X,Tran T,Simsek E,Block TM

    更新日期:2003-11-01 00:00:00

  • The varicella-zoster virus portal protein is essential for cleavage and packaging of viral DNA.

    abstract::The varicella-zoster virus (VZV) open reading frame 54 (ORF54) gene encodes an 87-kDa monomer that oligomerizes to form the VZV portal protein, pORF54. pORF54 was hypothesized to perform a function similar to that of a previously described herpes simplex virus 1 (HSV-1) homolog, pUL6. pUL6 and the associated viral ter...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00376-14

    authors: Visalli MA,House BL,Selariu A,Zhu H,Visalli RJ

    更新日期:2014-07-01 00:00:00

  • The morphology and composition of influenza A virus particles are not affected by low levels of M1 and M2 proteins in infected cells.

    abstract::We generated a recombinant influenza A virus (Mmut) that produced low levels of matrix (M1) and M2 proteins in infected cells. Mmut virus propagated to significantly lower titers than did wild-type virus in cells infected at low multiplicity. By contrast, virion morphology and incorporation of viral proteins and vRNAs...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.79.12.7926-7932.2005

    authors: Bourmakina SV,García-Sastre A

    更新日期:2005-06-01 00:00:00

  • Characterization of adenovirus type 2 transcriptional complexes isolated from infected HeLa cell nuclei.

    abstract::HeLa cell nuclei, isolated 17 h after infection with human adenovirus type 2 (Ad2), were treated with 200 mM ammonium sulfate. The extract (S200 fraction) contained 50 to 70% of the nonintegrated Ad2 DNA, which was in the form of nucleoprotein complexes. These complexes contained native, intact Ad2 DNA (with the excep...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.19.1.61-81.1976

    authors: Wilhelm J,Brison O,Kedinger C,Chambon P

    更新日期:1976-07-01 00:00:00

  • Entry Sites of Venezuelan and Western Equine Encephalitis Viruses in the Mouse Central Nervous System following Peripheral Infection.

    abstract:UNLABELLED:Venezuelan and western equine encephalitis viruses (VEEV and WEEV; Alphavirus; Togaviridae) are mosquito-borne pathogens causing central nervous system (CNS) disease in humans and equids. Adult CD-1 mice also develop CNS disease after infection with VEEV and WEEV. Adult CD-1 mice infected by the intranasal (...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.03219-15

    authors: Phillips AT,Rico AB,Stauft CB,Hammond SL,Aboellail TA,Tjalkens RB,Olson KE

    更新日期:2016-05-27 00:00:00

  • Analysis of the Epstein-Barr virus origin of plasmid replication (oriP) reveals an area of nucleosome sparing that spans the 3' dyad.

    abstract::The Epstein-Barr virus oriP, when examined with the use of in vitro nucleosome reconstitution, was found to exhibit a partial sparing of nucleosome assembly within the 3' dyad. Analysis of the homologous region containing the origin of replication of herpesvirus papio disclosed that sparing of nucleosome assembly was ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.63.12.5505-5508.1989

    authors: Sexton CJ,Pagano JS

    更新日期:1989-12-01 00:00:00

  • West Nile Virus-Inclusive Single-Cell RNA Sequencing Reveals Heterogeneity in the Type I Interferon Response within Single Cells.

    abstract::West Nile virus (WNV) is a neurotropic mosquito-borne flavivirus of global importance. Neuroinvasive WNV infection results in encephalitis and can lead to prolonged neurological impairment or death. Type I interferon (IFN-I) is crucial for promoting antiviral defenses through the induction of antiviral effectors, whic...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.01778-18

    authors: O'Neal JT,Upadhyay AA,Wolabaugh A,Patel NB,Bosinger SE,Suthar MS

    更新日期:2019-03-05 00:00:00

  • White spot syndrome virus proteins and differentially expressed host proteins identified in shrimp epithelium by shotgun proteomics and cleavable isotope-coded affinity tag.

    abstract::Shrimp subcuticular epithelial cells are the initial and major targets of white spot syndrome virus (WSSV) infection. Proteomic studies of WSSV-infected subcuticular epithelium of Penaeus monodon were performed through two approaches, namely, subcellular fractionation coupled with shotgun proteomics to identify viral ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.01006-07

    authors: Wu J,Lin Q,Lim TK,Liu T,Hew CL

    更新日期:2007-11-01 00:00:00