Automated matching and segmentation of lymphoma on serial CT examinations.

Abstract:

:In patients with lymphoma, identification and quantification of the tumor extent on serial CT examinations is critical for assessing tumor response to therapy. In this paper, we present a computer method to automatically match and segment lymphomas in follow-up CT images. The method requires that target lymph nodes in baseline CT images be known. A fast, approximate alignment technique along the x, y, and axial directions is developed to provide a good initial condition for the subsequent fast free form deformation (FFD) registration of the baseline and the follow-up images. As a result of the registration, the deformed lymph node contours from the baseline images are used to automatically determine internal and external markers for the marker-controlled watershed segmentation performed in the follow-up images. We applied this automated registration and segmentation method retrospectively to 29 lymph nodes in 9 lymphoma patients treated in a clinical trial at our cancer center. A radiologist independently delineated all lymph nodes on all slices in the follow-up images and his manual contours served as the "gold standard" for evaluation of the method. Preliminary results showed that 26/29 (89.7%) lymph nodes were correctly matched; i.e., there was a geometrical overlap between the deformed lymph node from the baseline and its corresponding mass in the follow-up images. Of the matched 26 lymph nodes, 22 (84.6%) were successfully segmented; for these 22 lymph nodes, several metrics were calculated to quantify the method's performance. Among them, the average distance and the Hausdorff distance between the contours generated by the computer and those generated by the radiologist were 0.9 mm (stdev. 0.4 mm) and 3.9 mm (stdev. 2.1 mm), respectively.

journal_name

Med Phys

journal_title

Medical physics

authors

Yan J,Zhao B,Curran S,Zelenetz A,Schwartz LH

doi

10.1118/1.2404617

subject

Has Abstract

pub_date

2007-01-01 00:00:00

pages

55-62

issue

1

eissn

0094-2405

issn

2473-4209

journal_volume

34

pub_type

杂志文章
  • Demonstration of megavoltage and diagnostic x-ray imaging with hydrogenated amorphous silicon arrays.

    abstract::Flat-panel imagers consisting of the first large area, self-scanning, pixelated, solid-state arrays made with hydrogenated amorphous silicon (a-Si:H) are under development by the authors for applications in diagnostic x-ray and megavoltage radiotherapy imaging. The arrays, designated by the acronym MASDA for multi-ele...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.596802

    authors: Antonuk LE,Boudry J,Huang W,McShan DL,Morton EJ,Yorkston J,Longo MJ,Street RA

    更新日期:1992-11-01 00:00:00

  • SU-E-T-118: Characterization of EBT3 Films in Photon and Proton Beams.

    abstract:PURPOSE:To measure the calibration curves of EBT3 dosimetry films in photon and proton beams and to quantify the related uncertainties from one beam type to another. METHODS:EBT3 Gafchromic films have similar properties than EBT2 with a symmetric construction and a matte polyester substrate to prevent Newton's ring ar...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.4735176

    authors: Sorriaux J,Rossomme S,Kacperek A,Bertrand D,Vynckier S,Sterpin E

    更新日期:2012-06-01 00:00:00

  • A mobile isocentric C-arm for intraoperative cone-beam CT: Technical assessment of dose and 3D imaging performance.

    abstract:PURPOSE:To characterize the radiation dose and three-dimensional (3D) imaging performance of a recently developed mobile, isocentric C-arm equipped with a flat-panel detector (FPD) for intraoperative cone-beam computed tomography (CBCT) (Cios Spin 3D, Siemens Healthineers) and to identify potential improvements in 3D i...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1002/mp.13983

    authors: Sheth NM,De Silva T,Uneri A,Ketcha M,Han R,Vijayan R,Osgood GM,Siewerdsen JH

    更新日期:2020-03-01 00:00:00

  • A fast 4D IMRT/VMAT planning method based on segment aperture morphing.

    abstract:PURPOSE:Four-dimensional volumetric modulated arc therapy (4D VMAT) and four-dimensional intensity-modulated radiotherapy (4D IMRT) are developing radiation therapy treatment strategies designed to maximize dose conformality, minimize normal tissue dose, and deliver the treatment as efficiently as possible. The patient...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1002/mp.12778

    authors: Klawikowski S,Tai A,Ates O,Ahunbay E,Li XA

    更新日期:2018-04-01 00:00:00

  • ARPM-net: A novel CNN-based adversarial method with Markov random field enhancement for prostate and organs at risk segmentation in pelvic CT images.

    abstract:PURPOSE:The research is to develop a novel CNN-based adversarial deep learning method to improve and expedite the multi-organ semantic segmentation of CT images and to generate accurate contours on pelvic CT images. METHODS:Planning CT and structure datasets for 120 patients with intact prostate cancer were retrospect...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1002/mp.14580

    authors: Zhang Z,Zhao T,Gay H,Zhang W,Sun B

    更新日期:2020-11-05 00:00:00

  • TU-E-217BCD-10: Dose Reduction in Digital Breast Tomosynthesis with the Dose Reduction Prior Image Constrained Compressed Sensing (DR-PICCS) Algorithm.

    abstract:PURPOSE:To reduce image noise and radiation dose in Digital Breast Tomosynthesis (DBT) reconstructions. METHODS:A retrospective study was performed on clinical data sets acquired at a normal dose with Hologic Selenia Dimensions DBT systems. The Prior Image Constrained Compressed Sensing (PICCS) algorithm was used to r...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.4735982

    authors: Garrett J,Tang J,Zhang Y,Ruth C,Jing Z,Chen GH

    更新日期:2012-06-01 00:00:00

  • On the efficiency of photon beam treatment head simulations.

    abstract::The paper presents a theoretical derivation of the photon fluence simulation efficiency in photon beam treatment head simulations without and with bremsstrahlung splitting. The expressions obtained provide a rigorous explanation of the efficiency dependence on scoring zone size and splitting number and explain the lar...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.1943808

    authors: Kawrakow I

    更新日期:2005-07-01 00:00:00

  • Compartment modeling of dynamic brain PET--the impact of scatter corrections on parameter errors.

    abstract:PURPOSE:The aim of this study was to investigate the effect of scatter and its correction on kinetic parameters in dynamic brain positron emission tomography (PET) tumor imaging. The 2-tissue compartment model was used, and two different reconstruction methods and two scatter correction (SC) schemes were investigated. ...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.4897610

    authors: Häggström I,Schmidtlein CR,Karlsson M,Larsson A

    更新日期:2014-11-01 00:00:00

  • Technical Note: Performance comparison of ultra-high-resolution scan modes of two clinical computed tomography systems.

    abstract:PURPOSE:Two ultra-high-resolution (UHR) computed tomography (CT) scanners are clinically available. One is achieved by a CT system with a 0.25 mm × 160 row detector (Detector-UHR), whereas the other is with a 0.6 mm × 32 row detector with in-plane comb filtering in a dual source CT (Comb-UHR). We compared radiation dos...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1002/mp.13949

    authors: Kawashima H,Ichikawa K,Takata T,Nagata H,Hoshika M,Akagi N

    更新日期:2020-02-01 00:00:00

  • Determination of the photon spectrum of a clinical accelerator.

    abstract::An experiment to determine the peak of the energy spectrum of the photon beam from a Toshiba LMR-15 medical linear accelerator is described. It is found that the flattening filters removed much of the bremsstrahlung spectrum below approximately 1 MeV, resulting in a photon spectrum which peaks around 1.2 MeV. ...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.595582

    authors: Brownridge J,Samnick S,Stiles P,Tipton P,Veselka J,Yeh N

    更新日期:1984-11-01 00:00:00

  • Patient specific optimization of the relation between CT-hounsfield units and proton stopping power with proton radiography.

    abstract::The purpose of this work is to show the feasibility of using in vivo proton radiography of a radiotherapy patient for the patient individual optimization of the calibration from CT-Hounsfield units to relative proton stopping power. Water equivalent tissue (WET) calibrated proton radiographs of a dog patient treated f...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.1833041

    authors: Schneider U,Pemler P,Besserer J,Pedroni E,Lomax A,Kaser-Hotz B

    更新日期:2005-01-01 00:00:00

  • Sci-Fri AM: Imaging - 05: Cone-beam computed tomography for breast biopsy analysis: Simulations.

    abstract:PURPOSE:To determine the feasibility and potential utility of cone beam CT on breast biopsies. METHODS:CBCT simulations were done with a setup which emulates an MX-20 digital specimen radiography system (Faxitron X-Ray Corporation, Chicago, IL), albeit a DQE = 1 was assumed. The phantom consisted of a 5mm diameter cyl...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.4740191

    authors: Laamanen C,LeClair R

    更新日期:2012-07-01 00:00:00

  • Image reconstruction algorithm for a rotating slat collimator.

    abstract::A slat collimator in single photon emission computed tomography consists of a set of parallel slats. As the collimator spins, the detector measures a one-dimensional projection data set. A complete data set can be obtained by rotating the detector/collimator assembly around the object (patient) while the collimator sp...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.1485057

    authors: Zeng GL,Gagnon D,Matthews CG,Kolthammer JA,Radachy JD,Hawkins WG

    更新日期:2002-07-01 00:00:00

  • Technical note: A novel boundary condition using contact elements for finite element based deformable image registration.

    abstract::Deformable image registration is an important tool for image-guided radiotherapy. Physics-model-based deformable image registration using finite element analysis is one of the methods currently being investigated. The calculation accuracy of finite element analysis is dependent on given boundary conditions, which are ...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.1774131

    authors: Zhang T,Orton NP,Mackie TR,Paliwal BR

    更新日期:2004-09-01 00:00:00

  • Accurate assessment and prediction of noise in clinical CT images.

    abstract:PURPOSE:The objectives of this study were (a) to devise a technique for measuring quantum noise in clinical body computed tomography (CT) images and (b) to develop a model for predicting that noise with high accuracy. METHODS:The study included 83 clinical image sets at two dose levels (clinical and 50% reduced dose l...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.4938588

    authors: Tian X,Samei E

    更新日期:2016-01-01 00:00:00

  • Definition of parameters for quality assurance of flattening filter free (FFF) photon beams in radiation therapy.

    abstract:PURPOSE:Flattening filter free (FFF) beams generated by medical linear accelerators have recently started to be used in radiotherapy clinical practice. Such beams present fundamental differences with respect to the standard filter flattened (FF) beams, making the generally used dosimetric parameters and definitions not...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.4754799

    authors: Fogliata A,Garcia R,Knoos T,Nicolini G,Clivio A,Vanetti E,Khamphan C,Cozzi L

    更新日期:2012-10-01 00:00:00

  • SU-E-J-194: The Impact of Different Imaging Measures on Treatment Response Assessment of Bone Metastases.

    abstract:PURPOSE:Several treatment response metrics, such as RECIST and PERCIST, have been established for assessing individual solid tumors. However, metastatic prostate cancer poses a unique challenge to these metrics because bone lesions are often numerous and non-measureable. This study investigated the impact of using diff...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.4735035

    authors: Morrison C,Liu G,Jeraj R

    更新日期:2012-06-01 00:00:00

  • Dosimetric problems at low monitor unit settings for scanned and scattering foil electron beams.

    abstract::Electron beam dosimetry at low monitor unit (MU) settings is important for dosimetric applications. Dose linearity, beam flatness, and beam energies were studied at low MU settings with various dose rates for different types of linear accelerators. It is observed that for the scattering foil units, the dose/MU is a sm...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.597328

    authors: Das IJ,Harrington JC,Akber SF,Tomer AF,Murray JC,Cheng CW

    更新日期:1994-06-01 00:00:00

  • MO-D-213CD-04: 4D X-Ray DSA and 4D Fluoroscopy.

    abstract::During the past decade the use of undersampled acquisition and constrained reconstruction have led to significant increases in data acquisition speed, SNR, spatial resolution and temporal resolution in MR imaging. When a separately acquired constraining image is combined with an angiographic time series the traditiona...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.4735797

    authors: Mistretta C

    更新日期:2012-06-01 00:00:00

  • An evaluation of the TSE MR sequence for time efficient data acquisition in polymer gel dosimetry of applications involving high doses and steep dose gradients.

    abstract::The use of magnetic resonance imaging as a readout method for polymer gel dosimetry commonly involves long imaging sessions, particularly when high spatial resolution is required in all three dimensions, for the investigation of dose distributions with steep dose gradients and stringent dose delivery specifications. I...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.2065367

    authors: Baras P,Seimenis I,Sandilos P,Vlahos L,Bieganski T,Georgiou E,Pantelis E,Papagiannis P,Sakelliou L

    更新日期:2005-11-01 00:00:00

  • Validation of GPU-accelerated superposition-convolution dose computations for the Small Animal Radiation Research Platform.

    abstract:PURPOSE:The Small Animal Radiation Research Platform (SARRP) has been developed for conformal microirradiation with on-board cone beam CT (CBCT) guidance. The graphics processing unit (GPU)-accelerated Superposition-Convolution (SC) method for dose computation has been integrated into the treatment planning system (TPS...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1002/mp.12862

    authors: Cho N,Tsiamas P,Velarde E,Tryggestad E,Jacques R,Berbeco R,McNutt T,Kazanzides P,Wong J

    更新日期:2018-05-01 00:00:00

  • Dependence with air density of the response of the PTW SourceCheck ionization chamber for low energy brachytherapy sources.

    abstract:PURPOSE:Air-communicating well ionization chambers are commonly used to assess air kerma strength of sources used in brachytherapy. The signal produced is supposed to be proportional to the air density within the chamber and, therefore, a density-independent air kerma strength is obtained when the measurement is correc...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.4831757

    authors: Tornero-López AM,Guirado D,Perez-Calatayud J,Ruiz-Arrebola S,Simancas F,Gazdic-Santic M,Lallena AM

    更新日期:2013-12-01 00:00:00

  • Elements of microdosimetry.

    abstract::This is an introductory tutorial to the field of microdosimetry. Following a brief historical outline, we review the physics of experimental and theoretical microdosimetry and the application of microdosimetry to radiation biology within the so-called "site" approximation. Modern interpretations of microdosimetry that...

    journal_title:Medical physics

    pub_type: 杂志文章,评审

    doi:10.1118/1.596616

    authors: Rossi HH,Zaider M

    更新日期:1991-11-01 00:00:00

  • Approaches to calculating AAPM TG-43 brachytherapy dosimetry parameters for 137Cs, 125I, 192Ir, 103Pd, and 169Yb sources.

    abstract::Underlying characteristics in brachytherapy dosimetry parameters for medical radionuclides 137Cs, 125I, 192Ir, 103Pd, and 169Yb were examined using Monte Carlo methods. Sources were modeled as unencapsulated point or line sources in liquid water to negate variations due to materials and construction. Importance of pha...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.2199987

    authors: Melhus CS,Rivard MJ

    更新日期:2006-06-01 00:00:00

  • Correcting kernel tilting and hardening in convolution/superposition dose calculations for clinical divergent and polychromatic photon beams.

    abstract::To account for clinical divergent and polychromatic photon beams, we have developed kernel tilting and kernel hardening correction methods for convolution dose calculation algorithms. The new correction methods were validated by Monte Carlo simulation. The accuracy and computation time of the our kernel tilting and ke...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.597960

    authors: Liu HH,Mackie TR,McCullough EC

    更新日期:1997-11-01 00:00:00

  • Iodine quantification in limited angle tomography.

    abstract:PURPOSE:To develop and test the feasibility of a two-pass iterative reconstruction algorithm with material decomposition designed to obtain quantitative iodine measurements in digital breast tomosynthesis. METHODS:Contrast-enhanced mammography has shown promise as a cost-effective alternative to magnetic resonance ima...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1002/mp.14400

    authors: Michielsen K,Rodríguez-Ruiz A,Reiser I,Nagy JG,Sechopoulos I

    更新日期:2020-10-01 00:00:00

  • Leakage and scatter radiation from a double scattering based proton beamline.

    abstract::Proton beams offer several advantages over conventional radiation techniques for treating cancer and other diseases. These advantages might be negated if the leakage and scatter radiation from the beamline and patient are too large. Although the leakage and scatter radiation for the double scattering proton beamlines ...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.2805086

    authors: Moyers MF,Benton ER,Ghebremedhin A,Coutrakon G

    更新日期:2008-01-01 00:00:00

  • Dosimetric properties of neutrons from 21-MeV deuteron bombardment of a deuterium gas target.

    abstract::Spectra, yields, average energies, and kerma rates in tissue of neutrons from 21-MeV deuteron bombardment of deuterium gas targets have been calculated for target thicknesses of 1, 3.5, and 5 MeV. A high pressure gas cell was constructed and was filled with 33 atm of D2 gas (equivalent to an energy loss of 3.5 MeV for...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.594561

    authors: Weaver KA,Eenmaa J,Bichsel H,Wootton P

    更新日期:1979-05-01 00:00:00

  • Dosimetric impact of motion in free-breathing and gated lung radiotherapy: a 4D Monte Carlo study of intrafraction and interfraction effects.

    abstract::The purpose of this study was to investigate if interfraction and intrafraction motion in free-breathing and gated lung IMRT can lead to systematic dose differences between 3DCT and 4DCT. Dosimetric effects were studied considering the breathing pattern of three patients monitored during the course of their treatment ...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.2821704

    authors: Seco J,Sharp GC,Wu Z,Gierga D,Buettner F,Paganetti H

    更新日期:2008-01-01 00:00:00

  • Sensitivity of amorphous selenium to x rays from 40 kVp to 18 MV: measurements and implications for portal imaging.

    abstract::Recently, the clinical application of electronic portal imaging devices has enabled more frequent verification of patient setup for radiation treatment. However, the image quality has sometimes proven to be inadequate, motivating the investigation of alternative sensors with better image quality. Amorphous selenium (a...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.598219

    authors: Mah D,Rowlands JA,Rawlinson JA

    更新日期:1998-04-01 00:00:00