Molecular phylogeny, identification and pathogenicity of Rhizopus oryzae associated with root rot of mulberry in India.

Abstract:

AIMS:Root rot caused by a group of fungi is a serious disease in mulberry. This study aims to identify and characterize Rhizopus oryzae and other fungal species associated with root rot of mulberry in India. METHODS AND RESULTS:Rotted root samples were collected from the mulberry gardens from four states of Southern India. The majority of the isolates identified were R. oryzae, and others were saprophytic fungi, less abundant to occasional. Two methods of inoculations were tested to confirm the pathogenicity of the selected isolates and R. oryzae was found to be pathogenic on susceptible mulberry genotypes RC2 and SRDC-1. Multi gene phylogenetic analyses using the internal transcribed spacer region (ITS), actin (ACT) and translation elongation factor 1-α (TEF), identified the isolates as R. oryzae. Additionally, Ovatospora brasiliensis, Amesia nigricolor, Gongronella butleri, Myrmecridium schulzeri, Scedosporium boydii, Graphium euwallacea, Clonostachys rosea andTalaromyces spp. were also identified. CONCLUSION:This study revealed the existence of eleven species of fungi including the first report of R. oryzae and the occurrence of weak pathogens or saprophytes that are associated with the root rot of mulberry in India. SIGNIFICANCE AND IMPACT OF THE STUDY:This is the first report of R. oryzae causing Rhizopus rot of mulberry in India. Moreover, the occurrence of saprophytes associated with root rot of mulberry was identified. Further studies should focus more on the ability of these species to generate secondary metabolites and extracellular lytic enzymes as they are beneficial for the management of root rot disease.

journal_name

J Appl Microbiol

authors

Gnanesh BN,Tejaswi A,Arunakumar GS,Supriya M,Manojkumar HB,Tewary P

doi

10.1111/jam.14959

subject

Has Abstract

pub_date

2020-12-04 00:00:00

eissn

1364-5072

issn

1365-2672

pub_type

杂志文章
  • A phytobeneficial strain Planomicrobium sp. MSSA-10 triggered oxidative stress responsive mechanisms and regulated the growth of pea plants under induced saline environment.

    abstract:AIMS:The study was planned to characterize Planomicrobium sp. MSSA-10 for plant-beneficial traits and to evaluate its inoculation impact on physiology of pea plants under different salinity levels. METHODS AND RESULTS:Strain MSSA-10 was isolated from pea rhizosphere and identified by the analysis of 16S rRNA gene sequ...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/jam.13732

    authors: Shahid M,Akram MS,Khan MA,Zubair M,Shah SM,Ismail M,Shabir G,Basheer S,Aslam K,Tariq M

    更新日期:2018-06-01 00:00:00

  • Physiology and taxonomy of thiobacillus strain TJ330, which oxidizes carbon disulphide (CS2).

    abstract::A bacterium (strain TJ330) capable of using carbon disulphide (CS2) as its sole energy source in an acidic environment was isolated from a peat biofilter used in experiments to remove CS2 and hydrogen sulphide (H2S) from air. Its physiology and taxonomy are described here. The strain oxidized CS2, H2S and elemental su...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2672.2000.01150.x

    authors: Hartikainen T,Ruuskanen J,Räty K,Von Wright A,Martikainen PJ

    更新日期:2000-10-01 00:00:00

  • Antimicrobial and disinfectant resistance of Escherichia coli isolated from giant pandas.

    abstract:AIMS:The study aims to demonstrate the antimicrobial and disinfectant resistance phenotypes and genotypes of Escherichia coli isolates obtained from giant pandas (Ailuropoda melanoleuca). METHODS AND RESULTS:Antimicrobial testing was performed according to the standard disk diffusion method. The minimal inhibitory con...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/jam.12820

    authors: Guo L,Long M,Huang Y,Wu G,Deng W,Yang X,Li B,Meng Y,Cheng L,Fan L,Zhang H,Zou L

    更新日期:2015-07-01 00:00:00

  • Vaginal microbial communities from synchronized heifers and cows with reproductive disorders.

    abstract:AIM:To evaluate changes in the resident microbial population in the cranial vaginal mucosa induced by a progesterone-releasing intravaginal device (PRID) compared to the vaginal microbiota of cows with reproductive disorders. METHODS AND RESULTS:Vaginal discharge was evaluated by clinical examination and a Vaginitis D...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/jam.13239

    authors: Gonzalez Moreno C,Fontana C,Cocconcelli PS,Callegari ML,Otero MC

    更新日期:2016-11-01 00:00:00

  • Staphylococcus aureus persistence properties associated with bovine mastitis and alternative therapeutic modalities.

    abstract::Staphylococcus aureus is an important agent of contagious bovine intramammary infections in dairy cattle. Its ability to persist inside the udder is based on the presence of important mechanisms such as its ability to form biofilms, polysaccharide capsules small colony variants, and their ability to invade professiona...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章,评审

    doi:10.1111/jam.14706

    authors: Zaatout N,Ayachi A,Kecha M

    更新日期:2020-11-01 00:00:00

  • Microbiological characterization and probiotic potential of koko and koko sour water, African spontaneously fermented millet porridge and drink.

    abstract:AIMS:To identify and examine the diversity of predominant lactic acid bacteria (LAB) in koko and koko sour water (KSW) from different Ghanaian production sites with regard to pattern of fermentation (API 50 CHL), genotype, antimicrobial activity, and resistance to low pH and bile salts. METHODS AND RESULTS:In total 21...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2672.2004.02162.x

    authors: Lei V,Jakobsen M

    更新日期:2004-01-01 00:00:00

  • Tolerance to challenges miming gastrointestinal transit by spores and vegetative cells of Bacillus clausii.

    abstract:AIMS:To study Bacillus clausii from a pharmaceutical product (Enterogermina O/C, N/R, SIN, T) and reference strains (B. clausii and Bacillus subtilis) for eco-physiological aspects regarding the gut environment. METHODS AND RESULTS:Spores and vegetative cells were challenged in vitro miming the injury of gastrointesti...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2672.2006.03042.x

    authors: Cenci G,Trotta F,Caldini G

    更新日期:2006-12-01 00:00:00

  • Continuing high prevalence of VanA-type vancomycin-resistant enterococci on Norwegian poultry farms three years after avoparcin was banned.

    abstract::Avoparcin was used as a feed additive in Norwegian broiler and turkey production from 1986 until 1995. It was banned due to the selection of VanA-type vancomycin-resistant enterococci (VRE) in animal husbandry and to reduce the potential for human exposure to VRE. The aim of the present study was to investigate the pr...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2672.2000.01137.x

    authors: Borgen K,Simonsen GS,Sundsfjord A,Wasteson Y,Olsvik O,Kruse H

    更新日期:2000-09-01 00:00:00

  • Proteomic identification of membrane proteins regulating antimicrobial peptide resistance in Vibrio parahaemolyticus.

    abstract:AIMS:To identify proteins regulating antimicrobial peptide (AMP) resistance in Vibrio parahaemolyticus using membrane subproteome analysis. METHODS AND RESULTS:Three synthetic AMPs (Q4, Q6 and H1) and a natural one from fish (pleurocidin) were used for selection of AMP-resistant strains. Differential expression patter...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2672.2009.04544.x

    authors: Shen CJ,Kuo TY,Lin CC,Chow LP,Chen WJ

    更新日期:2010-04-01 00:00:00

  • Anti-poliovirus activity of Baccharis dracunculifolia and propolis by cell viability determination and real-time PCR.

    abstract:AIMS:The aim of this work was to evaluate the antiviral activities of Baccharis dracunculifolia (extract and essential oil), propolis and some isolated compounds (caffeic and cinnamic acids) against poliovirus type 1 (PV1) replication in HEp-2 cells. METHOD:Three different protocols (pre-, simultaneous and post-treatm...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2672.2009.04354.x

    authors: Búfalo MC,Figueiredo AS,de Sousa JP,Candeias JM,Bastos JK,Sforcin JM

    更新日期:2009-11-01 00:00:00

  • Presence of Giardia cysts and Cryptosporidium oocysts in drinking water supplies in northern Spain.

    abstract:AIMS:To evaluate the prevalence of Cryptosporidium and Giardia in surface water supplies from the province of Alava, northern Spain, and to investigate possible associations among the presence of these pathogenic protozoa with microbiological, physicochemical and atmospheric parameters. METHODS AND RESULTS:A total of ...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2672.2006.03193.x

    authors: Carmena D,Aguinagalde X,Zigorraga C,Fernández-Crespo JC,Ocio JA

    更新日期:2007-03-01 00:00:00

  • Use of pulsed field gel electrophoresis as an epidemiological tool for analysis of sporadic associated strains of Salmonella typhi isolated in Taiwan.

    abstract::In order to characterize the subtypes of Salmonella typhi which cause sporadic disease in Taiwan, 55 isolates of Salm. typhi obtained from unrelated patients of sporadic cases during 1992-96 were subjected to chromosomal DNA digestion and pulsed field gel electrophoresis (PFGE). When DNAs of these 55 Salm. typhi strai...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2672.1999.00720.x

    authors: Tsen HY,Lin JS,Hu HH,Liu PR,Wang TK

    更新日期:1999-05-01 00:00:00

  • Modelling salinity inhibition effects during biodegradation of perchlorate.

    abstract:AIMS:To determine the mathematical kinetic rates and mechanisms of acclimated perchlorate (ClO)-reducing microbial cultures by incorporating a term to relate the inhibitory effect of high salinity during biological reduction of concentrated perchlorate solutions. METHODS AND RESULTS:Salt toxicity associated with the b...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2672.2006.02950.x

    authors: Park C,Marchand EA

    更新日期:2006-07-01 00:00:00

  • Characterization of a bovine isolate Lactobacillus mucosae DPC 6426 which produces an exopolysaccharide composed predominantly of mannose residues.

    abstract:AIMS:To characterize Lactobacillus strains with EPS-producing ability compared with non-EPS-producing lactobacilli of the same species for technological performance including simulated gastrointestinal tract (GIT) conditions. METHODS AND RESULTS:Characterization of EPS-producing Lactobacillus mucosae DPC 6426 in detai...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/jam.12542

    authors: London LE,Price NP,Ryan P,Wang L,Auty MA,Fitzgerald GF,Stanton C,Ross RP

    更新日期:2014-08-01 00:00:00

  • Effect of crop management and sample year on abundance of soil bacterial communities in organic and conventional cropping systems.

    abstract:AIMS:To identify changes in the bacterial community, at the phylum level brought about by varied crop management. METHODS AND RESULTS:Next-generation sequencing methods were used to compare the taxonomic structure of the bacterial community within 24 agricultural soils managed with either organic or conventional metho...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/jam.12822

    authors: Orr CH,Stewart CJ,Leifert C,Cooper JM,Cummings SP

    更新日期:2015-07-01 00:00:00

  • Heterologous expression of green fluorescent protein in Paenibacillus larvae, the causative agent of American Foulbrood of honey bees.

    abstract:AIMS:We aimed at expressing heterologous proteins in Paenibacillus larvae, the causative agent of American Foulbrood of honey bees, as a prerequisite for future studies on the molecular pathogenesis of P. larvae infections. METHODS AND RESULTS:For this purpose, we established a protocol for the transformation of the p...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2672.2011.05214.x

    authors: Poppinga L,Genersch E

    更新日期:2012-03-01 00:00:00

  • A 210-min solid phase cytometry test for the enumeration of Escherichia coli in drinking water.

    abstract::A 210-min-test for the enumeration of Escherichia coli in drinking water is described, based on solid phase cytometry (SPC) and a two-step enzymatic procedure for fluorescence labelling of single cells and small microcolonies. The test involves membrane filtration through a 25-mm black polyester filter, induction of b...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2672.2000.01125.x

    authors: Van Poucke SO,Nelis HJ

    更新日期:2000-09-01 00:00:00

  • Modelling of factors influencing the effect of osmotic solution on reduction of selected microorganisms.

    abstract:AIMS:The goal of this research is to model the effects of two osmotic solutions factors on the reduction of selected microorganisms, and to assess the application in osmotic dehydration process of animal raw materials from the aspect of microbiological safety. METHODS AND RESULTS:Sugar beet molasses and aquatic osmoti...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/jam.13927

    authors: Filipović I,Markov S,Filipović V,Filipović J,Vidaković A,Novković N,Rafajlovska V

    更新日期:2018-09-01 00:00:00

  • Impact of pulsed-electric field and high-voltage electrical discharges on red wine microbial stabilization and quality characteristics.

    abstract:AIMS:In this study, pulsed-electric fields (PEF) and high-voltage electrical discharges (HVED) are proposed as new techniques for the microbial stabilization of red wines before bottling. The efficiency of the treatment was then evaluated. METHODS AND RESULTS:PEF and HVED-treatments have been applied to wine for the i...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/jam.12981

    authors: Delsart C,Grimi N,Boussetta N,Miot Sertier C,Ghidossi R,Vorobiev E,Mietton Peuchot M

    更新日期:2016-01-01 00:00:00

  • Synthetic anti-endotoxin peptides interfere with Gram-positive and Gram-negative bacteria, their adhesion and biofilm formation on titanium.

    abstract:AIMS:Implant-associated infections arise from the formation of bacterial biofilms, which are difficult to be treated with conventional antibiotics. Therefore, there is a need for new implant functionalizations, which inhibit biofilm formation. The aim of the present study was to characterize the effect of synthetic pep...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/jam.14701

    authors: Subh L,Correa W,Pinkvos TJ,Behrens P,Brandenburg K,Gutsmann T,Stiesch M,Doll K,Winkel A

    更新日期:2020-11-01 00:00:00

  • A unique lantibiotic, thermophilin 1277, containing a disulfide bridge and two thioether bridges.

    abstract:AIMS:To identify the chemical structure of a bacteriocin, thermophilin 1277, produced by Streptococcus thermophilus SBT1277. METHODS AND RESULTS:Thermophilin 1277 was purified and partial N-terminal sequence analysis revealed 6 unidentified amino acids amongst 31 amino acids residues. A 2.7-kbp region containing the t...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2672.2008.04059.x

    authors: Kabuki T,Uenishi H,Seto Y,Yoshioka T,Nakajima H

    更新日期:2009-03-01 00:00:00

  • Kinetics of carbon sharing in a bacterial consortium revealed by combining stable isotope probing with fluorescence-activated cell sorting.

    abstract:AIMS:  To determine the kinetics of substrate fluxes in a microbial community in order to elucidate the roles of the community members. METHODS AND RESULTS:  The kinetics of substrate sharing in a bacterial consortium were measured by a new analytical approach combining immunostaining, stable isotope probing and fluor...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2672.2011.04964.x

    authors: Pawelczyk S,Bumann D,Abraham WR

    更新日期:2011-04-01 00:00:00

  • Solar UV reduces Cryptosporidium parvum oocyst infectivity in environmental waters.

    abstract:AIMS:To determine the effect of solar radiation on Cryptosporidium parvum in tap and environmental waters. METHODS AND RESULTS:Outdoor tank experiments and a cell culture infectivity assay were used to measure solar inactivation of C. parvum oocysts in different waters. Experiments conducted on days with different lev...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2672.2007.03658.x

    authors: King BJ,Hoefel D,Daminato DP,Fanok S,Monis PT

    更新日期:2008-05-01 00:00:00

  • The application of viable count procedures for measuring viable cells in the various marine environments.

    abstract:AIMS:To investigate whether the use of direct viable count (DVC), quantitative viable count (qDVC), colony-forming units and the contribution of capsule-bearing bacteria to the total number of bacteria and esterase-active bacteria could be used to clearly differentiate viable cells in various trophic status of seawater...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2672.2009.04411.x

    authors: Altug G,Cardak M,Ciftci PS,Gurun S

    更新日期:2010-01-01 00:00:00

  • Effect of environmental factors on tenuazonic acid production by Alternaria alternata on soybean-based media.

    abstract:AIMS:To determine the effects of water activity (a(W); 0.995-0.90), temperature (5, 18, 25 and 30 degrees C), time of incubation (7-35 days) and their interactions on tenuazonic acid (TA) production on 2% soybean-based agar by two Alternaria alternata strains isolated from soybean in Argentina. METHODS AND RESULTS:TA ...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2672.2009.04301.x

    authors: Oviedo MS,Ramirez ML,Barros GG,Chulze SN

    更新日期:2009-10-01 00:00:00

  • Growth characterization of individual rye sourdough bacteria by isothermal microcalorimetry.

    abstract:AIMS:The present work tests the feasibility of the isothermal microcalorimetry method to study the performance of individual lactic acid bacteria during solid-state fermentation in rye sourdough. Another aim was to elucidate the key factors leading to the formation of different microbial consortia in laboratory and ind...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2672.2010.04904.x

    authors: Mihhalevski A,Sarand I,Viiard E,Salumets A,Paalme T

    更新日期:2011-02-01 00:00:00

  • Characterization and mechanism of action of cerein 7, a bacteriocin produced by Bacillus cereus Bc7.

    abstract::Cerein 7 is a peptidic antibiotic produced by Bacillus cereus Bc7 (CECT 5148) at the end of exponential growth but before sporulation onset. Cerein 7 has a broad spectrum of antibacterial activity against Gram-positive bacteria, but it is inactive against Gram-negative bacteria. The sequence of its amino-terminal end ...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2672.2000.01123.x

    authors: Oscáriz JC,Pisabarro AG

    更新日期:2000-08-01 00:00:00

  • Low temperature bioremediation of oil-contaminated soil using biostimulation and bioaugmentation with a Pseudomonas sp. from maritime Antarctica.

    abstract:AIMS:To identify native Antarctic bacteria capable of oil degradation at low temperatures. METHODS AND RESULTS:Oil contaminated and pristine soils from Signy Island (South Orkney Islands, Antarctica) were examined for bacteria capable of oil degradation at low temperatures. Of the 300 isolates cultured, Pseudomonas st...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2672.2005.02678.x

    authors: Stallwood B,Shears J,Williams PA,Hughes KA

    更新日期:2005-01-01 00:00:00

  • Apple bagasse as a substrate for the propagation of Patagonian wine yeast biomass.

    abstract:AIMS:A culture medium based on apple bagasse was designed and tested as a substrate for biomass production of conventional and unconventional native wine yeasts. METHODS AND RESULTS:The physicochemical characterization of the apple bagasse was carried out and its potential utility as a constituent of a complete cultur...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/jam.14216

    authors: Bravo SME,Morales M,Del Mónaco SM,Caballero AC

    更新日期:2019-05-01 00:00:00

  • Chrysin protects mice from Staphylococcus aureus pneumonia.

    abstract:AIM:To elucidate the effect of chrysin on α-haemolysin production by Staphylococcus aureus and protection against pneumonia in a murine model. METHODS AND RESULTS:Haemolysis, Western blot and real-time RT-PCR assays were performed to evaluate the effect of chrysin on α-haemolysin secretion by Staph. aureus. The effica...

    journal_title:Journal of applied microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2672.2011.05170.x

    authors: Wang J,Qiu J,Dong J,Li H,Luo M,Dai X,Zhang Y,Leng B,Niu X,Zhao S,Deng X

    更新日期:2011-12-01 00:00:00