The genome sequence of the emerging common midwife toad virus identifies an evolutionary intermediate within ranaviruses.

Abstract:

:Worldwide amphibian population declines have been ascribed to global warming, increasing pollution levels, and other factors directly related to human activities. These factors may additionally be favoring the emergence of novel pathogens. In this report, we have determined the complete genome sequence of the emerging common midwife toad ranavirus (CMTV), which has caused fatal disease in several amphibian species across Europe. Phylogenetic and gene content analyses of the first complete genomic sequence from a ranavirus isolated in Europe show that CMTV is an amphibian-like ranavirus (ALRV). However, the CMTV genome structure is novel and represents an intermediate evolutionary stage between the two previously described ALRV groups. We find that CMTV clusters with several other ranaviruses isolated from different hosts and locations which might also be included in this novel ranavirus group. This work sheds light on the phylogenetic relationships within this complex group of emerging, disease-causing viruses.

journal_name

J Virol

journal_title

Journal of virology

authors

Mavian C,López-Bueno A,Balseiro A,Casais R,Alcamí A,Alejo A

doi

10.1128/JVI.07108-11

subject

Has Abstract

pub_date

2012-04-01 00:00:00

pages

3617-25

issue

7

eissn

0022-538X

issn

1098-5514

pii

JVI.07108-11

journal_volume

86

pub_type

杂志文章
  • Inter- and intragenus structural variations in caliciviruses and their functional implications.

    abstract::The family Caliciviridae is divided into four genera and consists of single-stranded RNA viruses with hosts ranging from humans to a wide variety of animals. Human caliciviruses are the major cause of outbreaks of acute nonbacterial gastroenteritis, whereas animal caliciviruses cause various host-dependent illnesses w...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.78.12.6469-6479.2004

    authors: Chen R,Neill JD,Noel JS,Hutson AM,Glass RI,Estes MK,Prasad BV

    更新日期:2004-06-01 00:00:00

  • Mechanism of Enhanced HIV Restriction by Virion Coencapsidated Cytidine Deaminases APOBEC3F and APOBEC3G.

    abstract::The APOBEC3 (A3) enzymes, A3G and A3F, are coordinately expressed in CD4+ T cells and can become coencapsidated into HIV-1 virions, primarily in the absence of the viral infectivity factor (Vif). A3F and A3G are deoxycytidine deaminases that inhibit HIV-1 replication by inducing guanine-to-adenine hypermutation throug...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.02230-16

    authors: Ara A,Love RP,Follack TB,Ahmed KA,Adolph MB,Chelico L

    更新日期:2017-01-18 00:00:00

  • The majority of infiltrating CD8+ T cells in the central nervous system of susceptible SJL/J mice infected with Theiler's virus are virus specific and fully functional.

    abstract::Theiler's virus infection of the central nervous system (CNS) induces an immune-mediated demyelinating disease in susceptible mouse strains, such as SJL/J, and serves as a relevant infectious model for human multiple sclerosis. It has been previously suggested that susceptible SJL/J mice do not mount an efficient cyto...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.76.13.6577-6585.2002

    authors: Kang BS,Lyman MA,Kim BS

    更新日期:2002-07-01 00:00:00

  • Application of a Fas ligand encoding a recombinant adenovirus vector for prolongation of transgene expression.

    abstract::An adenovirus vector encoding murine Fas ligand (mFasL) under an inducible control was derived. In vivo ectopic expression of mFasL in murine livers induced an inflammatory cellular infiltration. Furthermore, ectopic expression of mFasL by myocytes did not allow prolonged vector-mediated transgene expression. Thus, ec...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.72.3.2483-2490.1998

    authors: Zhang HG,Bilbao G,Zhou T,Contreras JL,Gómez-Navarro J,Feng M,Saito I,Mountz JD,Curiel DT

    更新日期:1998-03-01 00:00:00

  • A second receptor binding site on human parainfluenza virus type 3 hemagglutinin-neuraminidase contributes to activation of the fusion mechanism.

    abstract::The hemagglutinin-neuraminidase (HN) protein of paramyxoviruses carries out three discrete activities that each affect the ability of HN to promote viral fusion and entry: receptor binding, receptor cleaving (neuraminidase), and triggering of the fusion protein. The interrelationship between the receptor binding and f...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.02617-06

    authors: Porotto M,Fornabaio M,Kellogg GE,Moscona A

    更新日期:2007-04-01 00:00:00

  • Influence of gene 55 on the regulation of synthesis of some early enzymes in bacteriophage T4-infected escherichia coli.

    abstract::In Escherichia coli B infected with phage T4 with mutations in gene 55 the shut-off of synthesis of two early enzymes was found to be delayed 10 to 15 min as compared to wild-type T4 infection. The kinetics of early enzyme formation was very similar to that obtained after DNA-negative mutant infection. The transcripti...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.12.1.49-57.1973

    authors: Bolund C

    更新日期:1973-07-01 00:00:00

  • Upregulation of MicroRNA 711 Mediates HIV-1 Vpr Promotion of Kaposi's Sarcoma-Associated Herpesvirus Latency and Induction of Pro-proliferation and Pro-survival Cytokines by Targeting the Notch/NF-κB-Signaling Axis.

    abstract::Coinfection with HIV-1 and Kaposi's sarcoma-associated herpesvirus (KSHV) often leads to AIDS-related malignancies, including Kaposi's sarcoma (KS) and primary effusion lymphoma (PEL). The interaction between HIV and KSHV plays a pivotal role in the progression of these malignancies. We have previously demonstrated th...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00580-18

    authors: Yan Q,Zhao R,Shen C,Wang F,Li W,Gao SJ,Lu C

    更新日期:2018-08-29 00:00:00

  • Effects of herpes simplex virus on mRNA stability.

    abstract::Herpes simplex virus virions contain one or more functions which mediate shutoff of host protein synthesis, disaggregation of host polyribosomes, and degradation of host mRNA. We studied aspects of the host shutoff mechanism by using herpes simplex virus type 1 mutants deficient in virion-induced shutoff of host prote...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.61.7.2198-2207.1987

    authors: Strom T,Frenkel N

    更新日期:1987-07-01 00:00:00

  • Nucleotide sequences of the mRNA's encoding the vesicular stomatitis virus G and M proteins determined from cDNA clones containing the complete coding regions.

    abstract::The complete nucleotide sequences of the vesicular stomatitis virus mRNA's encoding the glycoprotein (G) and the matrix protein (M) have been determined from cDNA clones that contain the complete coding sequences from each mRNA. The G protein mRNA is 1,665 nucleotides long, excluding polyadenylic acid, and encodes a p...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.39.2.519-528.1981

    authors: Rose JK,Gallione CJ

    更新日期:1981-08-01 00:00:00

  • Reovirus variants selected for resistance to ammonium chloride have mutations in viral outer-capsid protein sigma3.

    abstract::Mammalian reoviruses are internalized into cells by receptor-mediated endocytosis. Within the endocytic compartment, the viral outer capsid undergoes acid-dependent proteolysis resulting in removal of the sigma3 protein and proteolytic cleavage of the mu1/mu1C protein. Ammonium chloride (AC) is a weak base that blocks...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.80.2.671-681.2006

    authors: Clark KM,Wetzel JD,Gu Y,Ebert DH,McAbee SA,Stoneman EK,Baer GS,Zhu Y,Wilson GJ,Prasad BV,Dermody TS

    更新日期:2006-01-01 00:00:00

  • Viral gene inhibition of class I major histocompatibility antigen expression: not a general mechanism governing the tumorigenicity of adenovirus type 2-, adenovirus type 12-, and simian virus 40-transformed Syrian hamster cells.

    abstract::The association between the level of class I major histocompatibility (MHC) antigen expression and the tumorigenic phenotype was determined for cells from a series of 15 lines of adenovirus type 2 (Ad2)-, Ad12-, and simian virus 40 (SV40)-transformed hamster cells and 16 lines of cells established from hamster tumors ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.62.8.2755-2761.1988

    authors: Haddada H,Sogn JA,Coligan JE,Carbone M,Dixon K,Levine AS,Lewis AM Jr

    更新日期:1988-08-01 00:00:00

  • Role of the sonchus yellow net virus N protein in formation of nuclear viroplasms.

    abstract::Sonchus yellow net virus is a plant nucleorhabdovirus whose nucleocapsid (N), phosphoprotein (P), and polymerase (L) proteins form large viroplasms in the nuclei of infected plants (C. R. F. Martins, J. A. Johnson, D. M. Lawrence, T. J. Choi, A. Pisi, S. L. Tobin, D. Lapidus, J. D. O. Wagner, S. Ruzin, K. McDonald, an...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.02349-06

    authors: Deng M,Bragg JN,Ruzin S,Schichnes D,King D,Goodin MM,Jackson AO

    更新日期:2007-05-01 00:00:00

  • Endoplasmic reticulum chaperones are involved in the morphogenesis of rotavirus infectious particles.

    abstract::The final assembly of rotavirus particles takes place in the endoplasmic reticulum (ER). In this work, we evaluated by RNA interference the relevance to rotavirus assembly and infectivity of grp78, protein disulfide isomerase (PDI), grp94, calnexin, calreticulin, and ERp57, members of the two ER folding systems descri...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.02751-07

    authors: Maruri-Avidal L,López S,Arias CF

    更新日期:2008-06-01 00:00:00

  • Nuclear factor 90 negatively regulates influenza virus replication by interacting with viral nucleoprotein.

    abstract::Interactions between host factors and the viral replication complex play important roles in host adaptation and regulation of influenza virus replication. A cellular protein, nuclear factor 90 (NF90), was copurified with H5N1 viral nucleoprotein (NP) from human cells in which NP was transiently expressed and identifie...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00735-09

    authors: Wang P,Song W,Mok BW,Zhao P,Qin K,Lai A,Smith GJ,Zhang J,Lin T,Guan Y,Chen H

    更新日期:2009-08-01 00:00:00

  • The p92 polymerase coding region contains an internal RNA element required at an early step in Tombusvirus genome replication.

    abstract::The replication of positive-strand RNA viral genomes involves various cis-acting RNA sequences. Generally, regulatory RNA sequences are present at or near genomic termini; however, internal replication elements (IREs) also exist. Here we report the structural and functional characterization of an IRE present in the re...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.79.8.4848-4858.2005

    authors: Monkewich S,Lin HX,Fabian MR,Xu W,Na H,Ray D,Chernysheva OA,Nagy PD,White KA

    更新日期:2005-04-01 00:00:00

  • Structural and nonstructural proteins of an arbovirus.

    abstract::Purified Semliki Forest virus (SFV) contains three structural proteins while its core (nucleocapsid) contains two of these proteins. To identify all of the proteins synthesized under virus direction, cells were infected with SFV in the presence of actinomycin D and guanidine. Cell protein synthesis was markedly and ir...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.2.10.1076-1080.1968

    authors: Friedman RM

    更新日期:1968-10-01 00:00:00

  • Epstein-Barr virus EB2 protein exports unspliced RNA via a Crm-1-independent pathway.

    abstract::Human herpesviruses encode posttranscriptional activators that are believed to up-regulate viral replication by facilitating early and late gene expression. We have reported previously that the Epstein-Barr virus protein EB2 (also called M or SM) promotes nuclear export of RNAs that are poor substrates for spliceosome...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.74.13.6068-6076.2000

    authors: Farjot G,Buisson M,Duc Dodon M,Gazzolo L,Sergeant A,Mikaelian I

    更新日期:2000-07-01 00:00:00

  • RNA 3' readthrough of oncoretrovirus and lentivirus: implications for vector safety and efficacy.

    abstract::The expression of reporter genes driven by the same human elongation factor 1alpha (EF1alpha) promoter in murine leukemia virus (MLV)- and human immunodeficiency virus type 1 (HIV-1)-based vectors was studied in either transfected or virally transduced cells. The HIV-1 vectors consistently expressed 3 to 10 times high...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.76.14.7209-7219.2002

    authors: Zaiss AK,Son S,Chang LJ

    更新日期:2002-07-01 00:00:00

  • Japanese Encephalitis Virus Induces Apoptosis and Encephalitis by Activating the PERK Pathway.

    abstract::Accumulated evidence demonstrates that Japanese encephalitis virus (JEV) infection triggers endoplasmic reticulum (ER) stress and neuron apoptosis. ER stress sensor protein kinase R-like endoplasmic reticulum kinase (PERK) has been reported to induce apoptosis under acute or prolonged ER stress. However, the precise r...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00887-19

    authors: Wang Q,Xin X,Wang T,Wan J,Ou Y,Yang Z,Yu Q,Zhu L,Guo Y,Wu Y,Ding Z,Zhang Y,Pan Z,Tang Y,Li S,Kong L

    更新日期:2019-08-13 00:00:00

  • Genomic analysis reveals age-dependent innate immune responses to severe acute respiratory syndrome coronavirus.

    abstract::The relationship between immunosenescence and the host response to virus infection is poorly understood at the molecular level. Two different patterns of pulmonary host responses to virus were observed when gene expression profiles from severe acute respiratory syndrome coronavirus (SARS-CoV)-infected young mice that ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00489-08

    authors: Baas T,Roberts A,Teal TH,Vogel L,Chen J,Tumpey TM,Katze MG,Subbarao K

    更新日期:2008-10-01 00:00:00

  • Inhibition of host translation in encephalomyocarditis virus-infected L cells: a novel mechanism.

    abstract::Encephalomyocarditis virus induced a rapid shutoff of host translation in mouse L cells shortly after infection and before viral proteins were made in detectable amounts. This kinetic pattern is similar to that seen in poliovirus-infected HeLa cells. However, the mechanisms of host shutoff are different in these two c...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.43.1.250-261.1982

    authors: Jen G,Thach RE

    更新日期:1982-07-01 00:00:00

  • Activation of STAT transcription factors by herpesvirus Saimiri Tip-484 requires p56lck.

    abstract::Signal transducers and activators of transcription (STATs) relay signals from activated cell surface receptors directly to the nucleus. Previously, a protein required for T-cell transformation by the DNA tumor virus herpesvirus saimiri (HVS) and designated tyrosine kinase interacting protein (Tip-484) was shown to int...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.71.9.6677-6682.1997

    authors: Lund TC,Garcia R,Medveczky MM,Jove R,Medveczky PG

    更新日期:1997-09-01 00:00:00

  • Transgenic plants expressing potato virus X ORF2 protein (p24) are resistant to tobacco mosaic virus and Ob tobamoviruses.

    abstract::The p24 protein, one of the three proteins implicated in local movement of potato virus X (PVX), was expressed in transgenic tobacco plants (Nicotiana tabacum Xanthi D8 NN). Plants with the highest level of p24 accumulation exhibited a stunted and slightly chlorotic phenotype. These transgenic plants facilitate the ce...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.72.1.731-738.1998

    authors: Ares X,Calamante G,Cabral S,Lodge J,Hemenway P,Beachy RN,Mentaberry A

    更新日期:1998-01-01 00:00:00

  • The mitogenic function of hepatitis B virus X protein resides within amino acids 51 to 140 and is modulated by N- and C-terminal regulatory regions.

    abstract::The hepatitis B virus (HBV) X protein (pX) is implicated in hepatocarcinogenesis by an unknown mechanism. pX variants encoded by HBV genomes found integrated in genomic DNA from liver tumors of patients with hepatocellular carcinoma (HCC) generally lack amino acids 134 to 154. Since deregulation of mitogenic pathways ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00661-06

    authors: Li H,Chi CY,Lee S,Andrisani OM

    更新日期:2006-11-01 00:00:00

  • Complementing defective viruses that express separate paramyxovirus glycoproteins provide a new vaccine vector approach.

    abstract::Replication-defective vaccine vectors based on vesicular stomatitis virus (VSV) lacking its envelope glycoprotein gene (G) are highly effective in animal models. However, such ΔG vectors are difficult to grow because they require complementation with the VSV G protein. In addition, the complementing G protein induces ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.01852-10

    authors: Chattopadhyay A,Rose JK

    更新日期:2011-03-01 00:00:00

  • Transcriptional activation and repression by cellular DNA-binding protein C/EBP.

    abstract::A putative transcription factor, C/EBP, isolated from rat liver nuclei, has been shown to bind to at least two different sequence motifs: the CCAAT promoter domain and a core sequence [GTGG(T/A)(T/A)(T/A)G] common to many viral enhancers, including simian virus 40 and human hepatitis B virus. It has been proposed that...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.64.4.1517-1522.1990

    authors: Pei DQ,Shih CH

    更新日期:1990-04-01 00:00:00

  • Control of expression of the herpes simplex virus-induced deoxypyrimidine triphosphatase in cells infected with mutants of herpes simplex virus types 1 and 2 and intertypic recombinants.

    abstract::Infection of cells with herpes simplex virus type 1 (HSV-1) induces high levels of deoxypyrimidine triphosphatase. The majority of the enzyme activity is found in infected cell nuclei. A similar activity is induced by HSV type 2 (HSV-2) which, in contrast to the HSV-1 enzyme, fractionates to more than 99% in the solub...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.43.3.935-942.1982

    authors: Wohlrab F,Garrett BK,Francke B

    更新日期:1982-09-01 00:00:00

  • Glycoprotein D of herpes simplex virus encodes a domain which precludes penetration of cells expressing the glycoprotein by superinfecting herpes simplex virus.

    abstract::Earlier studies have shown that herpes simplex viruses adsorb to but do not penetrate permissive baby hamster kidney clonal cell lines designated the BJ series and constitutively expressing the herpes simplex virus 1 (HSV-1) glycoprotein D (gD). To investigate the mechanism of the restriction, the following steps were...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.64.12.6070-6079.1990

    authors: Campadelli-Fiume G,Qi S,Avitabile E,Foà-Tomasi L,Brandimarti R,Roizman B

    更新日期:1990-12-01 00:00:00

  • High rates of infection with novel enterovirus variants in wild populations of mandrills and other old world monkey species.

    abstract:UNLABELLED:Enteroviruses (EVs) are a genetically and antigenically diverse group of viruses infecting humans. A mostly distinct set of EV variants have additionally been documented to infect wild apes and several, primarily captive, Old World monkey (OWM) species. To investigate the prevalence and genetic characteristi...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00088-14

    authors: Van Nguyen D,Harvala H,Ngole EM,Delaporte E,Woolhouse ME,Peeters M,Simmonds P

    更新日期:2014-06-01 00:00:00

  • Human rhinovirus type 14:human immunodeficiency virus type 1 (HIV-1) V3 loop chimeras from a combinatorial library induce potent neutralizing antibody responses against HIV-1.

    abstract::In an effort to develop a useful AIDS vaccine or vaccine component, we have generated a combinatorial library of chimeric viruses in which the sequence IGPGRAFYTTKN from the V3 loop of the MN strain of human immunodeficiency virus type 1 (HIV-1) is displayed in many conformations on the surface of human rhinovirus 14 ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.72.1.651-659.1998

    authors: Smith AD,Geisler SC,Chen AA,Resnick DA,Roy BM,Lewi PJ,Arnold E,Arnold GF

    更新日期:1998-01-01 00:00:00