Fluorescence technologies for monitoring interactions between biological molecules in vitro.

Abstract:

:Over the last two centuries, the discovery and understanding of the principle of fluorescence have provided new means of characterizing physical/biological/chemical processes in a noninvasive manner. Fluorescence spectroscopy has become one of the most powerful and widely applied methods in the life sciences, from fundamental research to clinical applications. In vitro, fluorescence approaches offer the potential to sense in real-time extra and intracellular molecular interactions and enzymatic reactions, which constitutes a major advantage over other approaches to the study of biomolecular interactions. This technology has been used for the characterization of protein/protein, protein/nucleic acid, protein/substrate, and biomembrane/biomolecule interactions, which play crucial roles in the regulation of cellular pathways. This chapter reviews the different fluorescence strategies that have been developed for sensing molecular interactions in vitro at both steady- and pre-steady-state levels.

authors

Deshayes S,Divita G

doi

10.1016/B978-0-12-386932-6.00004-1

subject

Has Abstract

pub_date

2013-01-01 00:00:00

pages

109-43

eissn

1877-1173

issn

1878-0814

pii

B978-0-12-386932-6.00004-1

journal_volume

113

pub_type

杂志文章,评审
  • Transcriptional and Epigenetic Control of Regulatory T Cell Development.

    abstract::The control of immune responses against self and nonharmful environmental antigens is of critical importance to the immune homeostasis. Regulatory T (Treg) cells are the key players of such immune regulation and their deficiency and dysfunction are associated with various immune disorders, such as autoimmunity and all...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2015.07.011

    authors: Kitagawa Y,Wing JB,Sakaguchi S

    更新日期:2015-01-01 00:00:00

  • Toll-IL-1-receptor-containing adaptor molecule-1: a signaling adaptor linking innate immunity to adaptive immunity.

    abstract::The innate immune system senses microbial infections using pattern-recognition receptors and signals to activate adaptive immunity. Type I transmembrane protein Toll-like receptors (TLRs) play important roles in antimicrobial immune responses. Upon the recognition of pathogen-associated molecular patterns, TLRs homo- ...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-386931-9.00018-0

    authors: Matsumoto M,Funami K,Oshiumi H,Seya T

    更新日期:2013-01-01 00:00:00

  • Competition for Manganese at the Host-Pathogen Interface.

    abstract::Transition metals such as manganese are essential nutrients for both pathogen and host. Vertebrates exploit this necessity to combat invading microbes by restricting access to these critical nutrients, a defense known as nutritional immunity. During infection, the host uses several mechanisms to impose manganese limit...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2016.05.002

    authors: Kelliher JL,Kehl-Fie TE

    更新日期:2016-01-01 00:00:00

  • 800 facets of retinal degeneration.

    abstract::In today's world of genomics and large computational analyses, rapid progress has been made in identifying genes associated with human retinal diseases. Nevertheless, before significant advances toward effective therapeutic intervention is made, a clearer understanding of the molecular and cellular role of these gene ...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-384878-9.00008-X

    authors: Cook T,Zelhof A,Mishra M,Nie J

    更新日期:2011-01-01 00:00:00

  • Immunoproteasomes: structure, function, and antigen presentation.

    abstract::Immunoproteasomes contain replacements for the three catalytic subunits of standard proteasomes. In most cells, oxidative stress and proinflammatory cytokines are stimuli that lead to elevated production of immunoproteasomes. Immune system cells, especially antigen-presenting cells, express a higher basal level of imm...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-397863-9.00003-1

    authors: Ferrington DA,Gregerson DS

    更新日期:2012-01-01 00:00:00

  • Carbon nanotubes: engineering biomedical applications.

    abstract::Carbon nanotubes (CNTs) are cylinder-shaped allotropic forms of carbon, most widely produced under chemical vapor deposition. They possess astounding chemical, electronic, mechanical, and optical properties. Being among the most promising materials in nanotechnology, they are also likely to revolutionize medicine. Amo...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-416020-0.00005-X

    authors: Gomez-Gualdrón DA,Burgos JC,Yu J,Balbuena PB

    更新日期:2011-01-01 00:00:00

  • α2 Adrenergic Receptor Trafficking as a Therapeutic Target in Antidepressant Drug Action.

    abstract::Antidepressant drugs remain poorly understood, especially with respect to pharmacological mechanisms of action. This lack of knowledge results from the extreme complexity inherent to psychopharmacology, as well as to a corresponding lack of knowledge regarding depressive disorder pathophysiology. While the final analy...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2015.03.007

    authors: Cottingham C,Ferryman CJ,Wang Q

    更新日期:2015-01-01 00:00:00

  • Chapter Seven - When Phosphorylation Encounters Ubiquitination: A Balanced Perspective on IGF-1R Signaling.

    abstract::Cell-surface receptors govern the critical information passage from outside to inside the cell and hence control important cellular decisions such as survival, growth, and differentiation. These receptors, structurally grouped into different families, utilize common intracellular signaling-proteins and pathways, yet p...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2016.04.001

    authors: Girnita L,Takahashi SI,Crudden C,Fukushima T,Worrall C,Furuta H,Yoshihara H,Hakuno F,Girnita A

    更新日期:2016-01-01 00:00:00

  • Contribution of mechanosensitive ion channels to somatosensation.

    abstract::Mechanotransduction, the conversion of a mechanical stimulus into an electrical signal, is a central mechanism to several physiological functions in mammals. It relies on the function of mechanosensitive ion channels (MSCs). Although the first single-channel recording from MSCs dates back to 30 years ago, the identity...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2014.11.011

    authors: Sharif-Naeini R

    更新日期:2015-01-01 00:00:00

  • Matrix Metalloproteinases in Normal Pregnancy and Preeclampsia.

    abstract::Normal pregnancy is associated with marked hemodynamic and uterine changes that allow adequate uteroplacental blood flow and uterine expansion for the growing fetus. These pregnancy-associated changes involve significant uteroplacental and vascular remodeling. Matrix metalloproteinases (MMPs) are important regulators ...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2017.04.001

    authors: Chen J,Khalil RA

    更新日期:2017-01-01 00:00:00

  • Free fatty acids and skeletal muscle insulin resistance.

    abstract::Insulin resistance plays a key role in the development of type 2 diabetes mellitus and is also associated with several other diseases, such as obesity, hypertension, and cardiovascular diseases. Type 2 diabetes and obesity have become epidemic worldwide in the past few decades, and epidemiological and metabolic eviden...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-800101-1.00008-9

    authors: Rachek LI

    更新日期:2014-01-01 00:00:00

  • G protein-coupled receptor heterocomplexes in neuropsychiatric disorders.

    abstract::G protein-coupled receptors (or GPCRs) represent the largest family of membrane proteins in the human genome and are the target of approximately half of all therapeutic drugs. GPCRs contain a conserved structure of seven transmembrane domains. Their amino terminus is located extracellularly, whereas the carboxy termin...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-386931-9.00008-8

    authors: Moreno JL,Holloway T,González-Maeso J

    更新日期:2013-01-01 00:00:00

  • Breast Cancer Epidemiology, Prevention, and Screening.

    abstract::Globally, breast cancer is both the most commonly occurring cancer and the commonest cause of cancer death among women. Available data suggest that incidence and mortality in high-resource countries has been declining whereas incidence and mortality in low-resource countries has been increasing. This pattern is likely...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2017.07.002

    authors: Winters S,Martin C,Murphy D,Shokar NK

    更新日期:2017-01-01 00:00:00

  • Diseases associated with genomic imprinting.

    abstract::Genomic imprinting is the phenomenon where the expression of a locus differs between the maternally and paternally inherited alleles. Typically, this manifests as transcriptional silencing of one of the alleles, although many genes are imprinted in a tissue- or isoform-specific manner. Diseases associated with imprint...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-387685-0.00013-5

    authors: Wilkins JF,Úbeda F

    更新日期:2011-01-01 00:00:00

  • Current and Emerging Targeting Strategies for Treatment of Pancreatic Cancer.

    abstract::With a dismal 5-year survival rate of only 8%, pancreatic cancer still remains a very lethal disease. As with most cancers, pancreatic cancer is treated with different combinations of chemotherapeutic drugs which result in side effects and potential drug resistance leading in many cases to the unfortunate demise of th...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2016.09.006

    authors: Baines AT,Martin PM,Rorie CJ

    更新日期:2016-01-01 00:00:00

  • Aggregation of disease-related peptides.

    abstract::Protein misfolding and aggregation of amyloid proteins is the fundamental cause of more than 20 diseases. Molecular mechanisms of the self-assembly and the formation of the toxic aggregates are still elusive. Computer simulations have been intensively used to study the aggregation of amyloid peptides of various amino ...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章

    doi:10.1016/bs.pmbts.2019.12.002

    authors: Nguyen PH,Sterpone F,Derreumaux P

    更新日期:2020-01-01 00:00:00

  • Autophagy in chronic lung disease.

    abstract::The development of chronic lung disease occurs as a consequence of multiple cellular events that involve an initial insult which often leads to the development of chronic inflammation, and the dysregulation of cellular proliferation and cell death mechanisms. Multiple cell types in the lung are key to the respiratory ...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章

    doi:10.1016/bs.pmbts.2020.02.001

    authors: Racanelli AC,Choi AMK,Choi ME

    更新日期:2020-01-01 00:00:00

  • The circadian clock in cancer development and therapy.

    abstract::Most aspects of mammalian function display circadian rhythms driven by an endogenous clock. The circadian clock is operated by genes and comprises a central clock in the brain that responds to environmental cues and controls subordinate clocks in peripheral tissues via circadian output pathways. The central and periph...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-396971-2.00009-9

    authors: Fu L,Kettner NM

    更新日期:2013-01-01 00:00:00

  • Wnt signaling and cardiac differentiation.

    abstract::The Wnt family of secreted glycoproteins participates in a wide array of biological processes, including cellular differentiation, proliferation, survival, apoptosis, adhesion, angiogenesis, hypertrophy, and aging. The canonical Wnt signaling primarily utilizes β-catenin-mediated activation of transcription, while the...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-398459-3.00007-1

    authors: Flaherty MP,Kamerzell TJ,Dawn B

    更新日期:2012-01-01 00:00:00

  • Heparan sulfate proteoglycans in amyloidosis.

    abstract::Amyloidosis is a generic term for a group of diseases characterized by deposits in different organ systems of insoluble materials composed mainly of distinct fibrillar proteins named amyloid. Besides amyloid, heparan sulfate proteoglycan (HSPG), is commonly found in most amyloid deposits, suggesting that HS/HSPG may b...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/S1877-1173(10)93013-5

    authors: Zhang X,Li JP

    更新日期:2010-01-01 00:00:00

  • Circulating tumor cells.

    abstract::Circulating tumor cells (CTCs) can be separated and characterized from normal hematopoietic cellular constituents by a variety of methods. Different strategies have included separation by physical characteristics, such as size or weight, or by biological characteristics, such as expression of epithelial or cancer-spec...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-385071-3.00005-8

    authors: Hayes DF,Smerage JB

    更新日期:2010-01-01 00:00:00

  • Oligomerization of G protein-coupled receptors: Still doubted?

    abstract::Experimental data accumulated during the last 10 years strongly support the existence and functional significance of oligomerization of G protein-coupled receptors (GPCRs). In this essay, we discuss the unique biochemical properties of GPCR oligomers in the frame of "allosterism" and how these properties can be used t...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2019.11.006

    authors: Ferré S,Ciruela F,Casadó V,Pardo L

    更新日期:2020-01-01 00:00:00

  • Corneal Dystrophies: Overview and Summary.

    abstract::In this chapter, I shall discuss the genetics, mode of inheritance and molecular origin of several corneal dystrophies. ...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2015.04.004

    authors: Schorderet D

    更新日期:2015-01-01 00:00:00

  • Amplified Detection of Prions and Other Amyloids by RT-QuIC in Diagnostics and the Evaluation of Therapeutics and Disinfectants.

    abstract::Among the most sensitive, specific and practical of methods for detecting prions are the real-time quaking-induced conversion (RT-QuIC) assays. These assays exploit the fundamental self-propagating activity of prions to amplify the presence of prion seeds by as much as a trillion-fold. The reactions can detect most of...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2017.06.003

    authors: Caughey B,Orru CD,Groveman BR,Hughson AG,Manca M,Raymond LD,Raymond GJ,Race B,Saijo E,Kraus A

    更新日期:2017-01-01 00:00:00

  • AD molecular: Imaging tau aggregates with positron emissions tomography.

    abstract::Pathologic aggregates of tau protein are observed in several neurodegenerative diseases and are used to diagnose and stage disease postmortem. Recent advances in positron emission tomography radioligands allow for the detection of aggregated tau proteins in living persons. This chapter describes the development and ch...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2019.07.007

    authors: Betthauser TJ

    更新日期:2019-01-01 00:00:00

  • Dynamics of lesion processing by bacterial nucleotide excision repair proteins.

    abstract::Single-molecule approaches permit an unrivalled view of how complex systems operate and have recently been used to understand DNA-protein interactions. These tools have enabled advances in a particularly challenging problem, the search for damaged sites on DNA. DNA repair proteins are present at the level of just a fe...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-387665-2.00001-8

    authors: Kad NM,Van Houten B

    更新日期:2012-01-01 00:00:00

  • Gene-sodium interaction and blood pressure: findings from genomics research of blood pressure salt sensitivity.

    abstract::High blood pressure (BP) is a complex trait determined by both genetic and environmental factors, as well as the interactions between these factors. Over the past few decades, there has been substantial progress in elucidating the genetic determinants underlying the BP response to sodium intake, or BP salt sensitivity...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-398397-8.00010-1

    authors: Kelly TN,He J

    更新日期:2012-01-01 00:00:00

  • Glycated serum proteins: High in pancreatic cancer and low in preeclampsia.

    abstract::Glycated serum protein (GSP, measured as serum fructosamine concentration in μmol/L) is a product of glycation reaction between glucose and serum proteins in the blood circulation. GSP is used along with blood glucose, glycated hemoglobin (HbA1c), and glycated albumin as indicators of glycemic control for diabetic pat...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章

    doi:10.1016/bs.pmbts.2019.01.007

    authors: Wang X,Zhang R,Zhang L,Tian Z

    更新日期:2019-01-01 00:00:00

  • Early detection and personalized medicine: Future strategies against Alzheimer's disease.

    abstract::Alzheimer's disease (AD) is the leading cause of dementia and sixth cause of death in elderly adults. AD poses a huge economic burden on society and constitutes an unprecedented challenge for caregivers and families affected. Aging of the population is projected to drastically aggravate the situation in the near futur...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章

    doi:10.1016/bs.pmbts.2020.10.002

    authors: Di Meco A,Vassar R

    更新日期:2021-01-01 00:00:00

  • Mouse Models of Gonadotrope Development.

    abstract::The pituitary gonadotrope is central to reproductive function. Gonadotropes develop in a systematic process dependent on signaling factors secreted from surrounding tissues and those produced within the pituitary gland itself. These signaling pathways are important for stimulating specific transcription factors that u...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2016.08.001

    authors: Stallings CE,Kapali J,Ellsworth BS

    更新日期:2016-01-01 00:00:00