Abstract:
:The green plants (Viridiplantae) are an essential kingdom of life, responsible via photosynthesis for the majority of global primary production, and directly utilized by humankind for nutrition, animal feed, fuel, clothing, medicine and other purposes. There are an estimated 391 000 species of land plants, in addition to 8000 species of green algae. Their genomes are unusually diverse compared to those of other kingdoms, ranging in size from ∼10 Mb to over 100 Gb. Knowledge of plant genomes initially lagged behind those of other kingdoms but has greatly increased with the development of new technologies for DNA sequencing; bioinformatic analysis, rather than data production, is increasingly the bottleneck to further knowledge. Recent proposals are now contemplating the sequencing, assembly and annotation of the genomes of all of the world's plant species; meanwhile, low coverage sequencing to measure diversity across collections and wild populations has already become commonplace for many species, especially those utilized as crops.
journal_name
Curr Opin Plant Bioljournal_title
Current opinion in plant biologyauthors
Kersey PJdoi
10.1016/j.pbi.2018.11.001subject
Has Abstractpub_date
2019-04-01 00:00:00pages
1-8eissn
1369-5266issn
1879-0356pii
S1369-5266(18)30091-8journal_volume
48pub_type
杂志文章,评审abstract::Plants must adapt to drought stress to survive. The phytohormone abscisic acid (ABA) is produced under drought stress conditions and is essential for the response to drought stress. The ABA level plays an important role in the response, and several enzymes for ABA biosynthesis and catabolism have been identified. Phys...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2007.04.014
更新日期:2007-06-01 00:00:00
abstract::The plant vascular system plays a pivotal role in the delivery of nutrients to distantly located organs. Recent discoveries have provided new insight into a novel role for plasmodesmata and the phloem in terms of the transport and delivery of information macromolecules (i.e. proteins and ribonucleoprotein complexes). ...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
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abstract::Plant senescence is a natural phenomenon known for the appearance of beautiful autumn colors and the ripening of cereals in the field. Senescence is a controlled process that plants utilize to remobilize nutrients from source leaves to developing tissues. While during the past decades, molecular components underlying ...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
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更新日期:2015-10-01 00:00:00
abstract::Plant biotechnology has recently become the focus of heated controversy and media attention, particularly in the UK. The most obvious concerns have centred upon the possible effects of the technology on the environment and on human health, but a broader and more fundamental set of considerations has also been evident ...
journal_title:Current opinion in plant biology
pub_type: 杂志文章
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更新日期:2000-04-01 00:00:00
abstract::Stem cells exist in specific locations called niches, where extracellular signals maintain stem cell division and prevent differentiation. In plants, the best characterised niches are within the shoot and root meristems. Networks of regulatory genes and intercellular signals maintain meristem structure in spite of con...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2007.07.001
更新日期:2007-12-01 00:00:00
abstract::Recent studies indicate that, in a manner similar to classical plant hormones, sugars can act as signaling molecules that control gene expression and developmental processes in plants. Crucial evidence includes uncoupling glucose signaling from its metabolism, identification of glucose sensors, and isolation and chara...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/s1369-5266(99)00014-x
更新日期:1999-10-01 00:00:00
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journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2005.05.016
更新日期:2005-08-01 00:00:00
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journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2011.02.006
更新日期:2011-04-01 00:00:00
abstract::Specific subsets of microbes are capable of assembly into plant-associated communities that influence the fitness of both the host and the microbes. While there is a large spectrum of plant phenotypes cause by microbes, the microbial community members benefit from living in protected and nutrient rich plant-associated...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2015.02.004
更新日期:2015-04-01 00:00:00
abstract::Completion of the genomic sequencing of rice has enhanced the discovery of new genes. Wild rice relatives are good sources for extending the genetic variation of cultivated rice. Reproductive barriers are commonly found in distant crosses of rice and are attracting attention. The combination of genetic analyses and mo...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2008.01.008
更新日期:2008-04-01 00:00:00
abstract::Both high and low extremes in precipitation increasingly impact agricultural productivity and sustainability as a consequence of global climate change. Elucidation of the genetic basis underlying stress tolerance facilitates development of new rice varieties with enhanced tolerance. Submergence tolerance is conferred ...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2013.02.003
更新日期:2013-05-01 00:00:00
abstract::Recent studies on the differential expression of genes associated with leaf senescence support the long-standing interpretation of plant senescence as an organized, genetically controlled process. Sequence identities of genes that are differentially expressed in senescing leaves indicate roles in the salvage of nutrie...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/s1369-5266(98)80131-3
更新日期:1998-02-01 00:00:00
abstract::Among plant-microbe interactions, root nodule symbiosis is one of the most important beneficial interactions providing legume plants with nitrogenous compounds. Over the past years a number of genes required for root nodule symbiosis has been identified but most recently great advances have been made to dissect signal...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2011.03.016
更新日期:2011-08-01 00:00:00
abstract::Gravitropism is the directional control of plant organ growth in response to gravity. Specialized gravity-sensing cells contain amyloplasts that can change their position according to the direction of gravity. Gravity signaling, which is elicited by the relocation of amyloplasts, is a key process that redirects auxin ...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2019.07.005
更新日期:2019-12-01 00:00:00
abstract::Mitogen-activated protein kinases (MAPKs) link information transfer from external stimuli-activated sensors to cellular responses. The completed Arabidopsis genome sequence revealed an extraordinary complexity in MAPK-signalling components in plants. Information obtained from Arabidopsis provides a framework for a uni...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/s1369-5266(02)00285-6
更新日期:2002-10-01 00:00:00
abstract::Bacterial pathogens have co-evolved with their hosts in their ongoing quest for advantage in the resulting interaction. These intimate associations have resulted in remarkable adaptations of prokaryotic virulence proteins and their eukaryotic molecular targets. An important strategy used by microbial pathogens of anim...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2006.05.005
更新日期:2006-08-01 00:00:00
abstract::Medicago truncatula will be among the first plant species to benefit from the completion of a whole-genome sequencing project. For each of these species, Arabidopsis, rice and now poplar and Medicago, annotation, the process of identifying gene structures and defining their functions, is essential for the research com...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2006.01.004
更新日期:2006-04-01 00:00:00
abstract::Flooding is one of the most hazardous natural disasters, and there are several levels of flooding. Recently, research on flood-tolerant rice plants revealed that some rice varieties have evolved to overcome two different flood types, 'flash flood' and 'deepwater flood', using two different mechanisms, and their molecu...
journal_title:Current opinion in plant biology
pub_type: 杂志文章
doi:10.1016/j.pbi.2010.09.008
更新日期:2011-02-01 00:00:00
abstract::RNA-seq, the measurement of steady-state RNA levels by next generation sequencing, has enabled quantitative transcriptome analyses of complex traits in many species without requiring the parallel sequencing of their genomes. The complex trait of C4 photosynthesis, which increases photosynthetic efficiency via a bioche...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2016.03.007
更新日期:2016-06-01 00:00:00
abstract::The pathway of starch synthesis in the cereal endosperm is unique, and requires enzyme isoforms that are not present in other cereal tissues or non-cereal plants. Recent information on the functions of individual enzyme isoforms has provided insight into how the linear chains and branch linkages in cereal starch are s...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
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更新日期:2003-06-01 00:00:00
abstract::In the past year progress has been made in the manipulation of phenylpropanoid metabolism but several studies highlight gaps in our understanding of the biochemistry of these pathways. New components involved in transcriptional regulation of phenylpropanoid genes have been identified, including transcription factors a...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/s1369-5266(98)80113-1
更新日期:1998-06-01 00:00:00
abstract::Non-coding small endogenous RNAs, of 21-24 nucleotides in length, have recently emerged as important regulators of gene expression in both plants and animals. At least three categories of small RNAs exist in plants: short interfering RNAs (siRNAs) deriving from viruses or transgenes and mediating virus resistance or t...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2004.01.006
更新日期:2004-04-01 00:00:00
abstract::Variation in grass architecture profoundly affects light capture, competition, and reproductive success, and is responsive to environmental factors such as crowding and nutrient limitation. Recent work in both model and crop systems has uncovered many aspects of the genetic control of branching, including conservation...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2006.11.015
更新日期:2007-02-01 00:00:00
abstract::Meristems are centers of cell proliferation with a defined internal structure that is dynamically perpetuated throughout a plant's life although its constituent cells constantly change. When progressing from stem cell state towards differentiation, individual cells adopt developmental programs according to their curre...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2013.11.011
更新日期:2014-02-01 00:00:00
abstract::It is now well established that the orientation of the plane of cell division highly depends on cell geometry in plants. However, the related molecular mechanism remains largely unknown. Recent data in animal systems highlight the role of the cytoskeleton response to mechanical stress in this process. Interestingly, t...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2013.10.011
更新日期:2013-12-01 00:00:00
abstract::Plant cells sense, weigh and integrate various endogenous and exogenous cues in order to optimize acclimation and resource allocation. The thiol/disulfide redox network appears to be in the core of this versatile integration process. In plant cells its complexity exceeds by far that of other organisms. Recent research...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2011.12.002
更新日期:2012-06-01 00:00:00
abstract::Asymmetric cell divisions (ACDs) are used to create organismal form and cellular diversity during plant development. In several embryonic and postembryonic contexts, genes that specify cell fates and networks that provide positional information have been identified. The cellular mechanisms that translate this informat...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2010.09.016
更新日期:2010-12-01 00:00:00
abstract::Methylation of histones on different lysine residues is dynamically added by distinct writer enzymes, interpreted by reader proteins, and removed by eraser enzymes. This epigenetic mark has widespread, dynamic roles in plant development and environmental responses. For example, histone methylation plays a key role in ...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
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更新日期:2021-01-25 00:00:00
abstract::Thousands of sieve tube exudate proteins (STEP) have now been identified and predicted to fulfill a diversity of functions. However, most STEPs should be considered putative, since methods to collect sieve tube exudates have many technical drawbacks, and advanced functional characterization will be required to disting...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2018.04.008
更新日期:2018-06-01 00:00:00
abstract::Starch is one of the major sinks of fixed carbon in photosynthetic tissues of higher plants. Carbon fixation and the synthesis of primary starch occur during the day in the chloroplast stroma, whereas starch degradation typically occurs during the following night to fuel the whole plant with energy and carbon in the a...
journal_title:Current opinion in plant biology
pub_type: 杂志文章,评审
doi:10.1016/j.pbi.2015.04.003
更新日期:2015-06-01 00:00:00