Abstract:
:Contrast source inversion-electrical properties tomography (CSI-EPT) is an iterative reconstruction method to retrieve the electrical properties (EPs) of tissues from magnetic resonance data. The method is based on integral representations of the electromagnetic field and has been shown to allow EP reconstructions of small structures as well as tissue boundaries with compelling accuracy. However, to date, the CSI-EPT has been implemented for 2-D configurations only, which limits its applicability. In this paper, a full 3-D extension of the CSI-EPT method is presented, to enable CSI-EPT to be applied to realistic 3-D scenarios. Here, we demonstrate a proof-of-principle of 3-D CSI-EPT and present the reconstructions of a 3-D abdominal body section and a 3-D head model using different settings of the transmit coil. Numerical results show that the full 3-D approach yields accurate reconstructions of the EPs, even at tissue boundaries and is most accurate in regions where the absolute value of the electric field is highest.
journal_name
IEEE Trans Med Imagingjournal_title
IEEE transactions on medical imagingauthors
Leijsen RL,Brink WM,van den Berg CAT,Webb AG,Remis RFdoi
10.1109/TMI.2018.2816125subject
Has Abstractpub_date
2018-09-01 00:00:00pages
2080-2089issue
9eissn
0278-0062issn
1558-254Xjournal_volume
37pub_type
杂志文章abstract::We present a novel approach to the problem of neuron segmentation in image volumes acquired by an electron microscopy. Existing methods, such as agglomerative or correlation clustering, rely solely on boundary evidence and have problems where such an evidence is lacking (e.g., incomplete staining) or ambiguous (e.g., ...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2017.2712360
更新日期:2018-04-01 00:00:00
abstract::We present a novel method to segment instances of glandular structures from colon histopathology images. We use a structure learning approach which represents local spatial configurations of class labels, capturing structural information normally ignored by sliding-window methods. This allows us to reveal different sp...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2017.2750210
更新日期:2018-01-01 00:00:00
abstract::Fetal brain magnetic resonance imaging (MRI) offers exquisite images of the developing brain but is not suitable for second-trimester anomaly screening, for which ultrasound (US) is employed. Although expert sonographers are adept at reading US images, MR images which closely resemble anatomical images are much easier...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2020.3018560
更新日期:2020-12-01 00:00:00
abstract::The identification of bronchi on Computed Tomography (CT) images of the lungs provides valuable clinical information in patients with suspected airways diseases including bronchiectasis, emphysema, or constrictive obliterative bronchiolitis. The automated recognition of the airways is, therefore, an important part of ...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/42.952731
更新日期:2001-09-01 00:00:00
abstract::We propose a new method for deformable registration of pre-operative and post-recurrence brain MR scans of glioma patients. Performing this type of intra-subject registration is challenging as tumor, resection, recurrence, and edema cause large deformations, missing correspondences, and inconsistent intensity profiles...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2013.2293478
更新日期:2014-03-01 00:00:00
abstract::A three-dimensional reconstruction method which uses cone-beam data was implemented. Issues concerning implementation are investigated and discussed in detail. Computer simulations were used to determine the amount of image degradation occurring in each of the three steps that comprise the reconstruction method. In ad...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/42.141650
更新日期:1992-01-01 00:00:00
abstract::Transmit arrays have been developed to mitigate the RF field inhomogeneity commonly observed in high field magnetic resonance imaging (MRI), typically above 3T. To this end, the knowledge of the RF complex-valued B1 transmit-sensitivities of each independent radiating element has become essential. This paper details a...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2014.2322440
更新日期:2014-08-01 00:00:00
abstract::For fully characterizing renal cell carcinoma (RCC), information about the 3D tissue microstructure is essential. Histopathology, which represents the current diagnostic gold standard, is destructive and only provides 2D information. 3D X-ray histology endeavors to overcome these limitations by generating 3D data. In ...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2019.2952028
更新日期:2020-05-01 00:00:00
abstract::Most existing CNNs-based segmentation methods rely on local appearances learned on the regular image grid, without consideration of the object global information. This article aims to embed the object global geometric information into a learning framework via the classical geodesic active contours (GAC). We propose a ...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2020.3022693
更新日期:2021-01-01 00:00:00
abstract::The feasibility of K-edge imaging using energy-resolved, photon-counting transmission measurements in X-ray computed tomography (CT) has been demonstrated by simulations and experiments. The method is based on probing the discontinuities of the attenuation coefficient of heavy elements above and below the K-edge energ...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2011.2142188
更新日期:2011-09-01 00:00:00
abstract::Functional magnetic resonance imaging (fMRI) provides a window on the human brain at work. Spontaneous brain activity measured during resting-state has already provided many insights into brain function. In particular, recent interest in dynamic interactions between brain regions has increased the need for more advanc...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2017.2755369
更新日期:2018-01-01 00:00:00
abstract::In single photon emission computed tomography (SPECT), every reconstruction algorithm must use some model for the response of the gamma camera to emitted gamma-rays. The true camera response is both spatially variant and object dependent. These two properties result from the effects of scatter, septal penetration, and...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/42.126914
更新日期:1992-01-01 00:00:00
abstract::A method for fully automated morphological and topological quantification of microvascular structures in confocal laser scanning microscopy (CLSM) volume datasets is presented. Several characteristic morphological and topological quantities are calculated in a series of image-processing steps and can be used to compar...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2007.900379
更新日期:2007-08-01 00:00:00
abstract::We investigate the effects of initial conditions in the iterative maximum-likelihood (ML) reconstruction of fan-beam transmission projection data with truncation. In an iterative ML reconstruction, the estimate of the transmission reconstructed image in the previous iteration is multiplied by some factors to obtain th...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/42.611352
更新日期:1997-08-01 00:00:00
abstract::Statistical image reconstruction methods for X-ray computed tomography (CT) provide improved spatial resolution and noise properties over conventional filtered back-projection (FBP) reconstruction, along with other potential advantages such as reduced patient dose and artifacts. Conventional regularized image reconstr...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2014.2365179
更新日期:2015-02-01 00:00:00
abstract::We present a dynamic atlas composed of neuromelanin-enhanced magnetic resonance brain images of 40 healthy subjects. The performance of this atlas is evaluated on the fully automated segmentation of two paired neuromelanin-rich brainstem healthy structures: the substantia nigra pars compacta and the locus coeruleus. W...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2018.2872852
更新日期:2019-03-01 00:00:00
abstract::With continuing improvements in spatial resolution of positron emission tomography (PET) scanners, small patient movements during PET imaging become a significant source of resolution degradation. This work develops and investigates a comprehensive formalism for accurate motion-compensated reconstruction which at the ...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2008.917248
更新日期:2008-08-01 00:00:00
abstract::We introduce a multi-region model for simultaneous segmentation of medical images. In contrast to many other models, geometric constraints such as inclusion and exclusion between the regions are enforced, which makes it possible to correctly segment different regions even if the intensity distributions are identical. ...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2012.2218117
更新日期:2013-02-01 00:00:00
abstract::We present a new method to automatically compute, reorient, and recenter the mid-sagittal plane in anatomical and functional three-dimensional (3-D) brain images. This iterative approach is composed of two steps. At first, given an initial guess of the mid-sagittal plane (generally, the central plane of the image grid...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/42.993131
更新日期:2002-02-01 00:00:00
abstract::It is well known that the energy dependence of X-ray attenuation can be used to characterize materials. Yet, even with energy discriminating photon counting X-ray detectors, it is still unclear how to best form energy dependent measurements for spectral imaging. Common ideas include binning photon counts based on thei...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2010.2061862
更新日期:2011-01-01 00:00:00
abstract::Most benign breast tumors possess well-defined, sharp boundaries that delineate them from surrounding tissues, as opposed to malignant tumors. Computer techniques proposed to date for tumor analysis have concentrated on shape factors of tumor regions and texture measures. While shape measures based on contours of tumo...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/42.650876
更新日期:1997-12-01 00:00:00
abstract::Cervical cancer causes the fourth most cancer-related deaths of women worldwide. Early detection of cervical intraepithelial neoplasia (CIN) can significantly increase the survival rate of patients. In this paper, we propose a deep learning framework for the accurate identification of LSIL+ (including CIN and cervical...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2020.2994778
更新日期:2020-11-01 00:00:00
abstract::We propose a new spatio-temporal elastic registration algorithm for motion reconstruction from a series of images. The specific application is to estimate displacement fields from two-dimensional ultrasound sequences of the heart. The basic idea is to find a spatio-temporal deformation field that effectively compensat...
journal_title:IEEE transactions on medical imaging
pub_type: 临床试验,杂志文章
doi:10.1109/TMI.2005.852050
更新日期:2005-09-01 00:00:00
abstract::We suggest a polynomial program for the calculation of optimized gradient waveforms for magnetic resonance tomography pulse sequences. Such non-linear mathematical programs can describe gradient system capabilities, meet k-space trajectory specifications, and capture sequence timing conditions. Moreover they allow the...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2010.2042723
更新日期:2010-06-01 00:00:00
abstract::This paper presents a statistical shape model for the automatic prostate segmentation in transrectal ultrasound images. A Gabor filter bank is first used to characterize the prostate boundaries in ultrasound images in both multiple scales and multiple orientations. The Gabor features are further reconstructed to be in...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2003.809057
更新日期:2003-04-01 00:00:00
abstract::Segmentation of the wrist bones in CT images has been frequently used in different clinical applications including arthritis evaluation, bone age assessment and image-guided interventions. The major challenges include non-uniformity and spongy textures of the bone tissue as well as narrow inter-bone spaces. In this wo...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2016.2529500
更新日期:2016-08-01 00:00:00
abstract::In this paper a psychophysical experiment and a multidimensional scaling (MDS) analysis are undergone to determine the physical characteristics that physicians employ to diagnose a burn depth. Subsequently, these characteristics are translated into mathematical features, correlated with these physical characteristics ...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2013.2254719
更新日期:2013-06-01 00:00:00
abstract::In this paper, we propose a new prostate computed tomography (CT) segmentation method for image guided radiation therapy. The main contributions of our method lie in the following aspects. 1) Instead of using voxel intensity information alone, patch-based representation in the discriminative feature space with logisti...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2012.2230018
更新日期:2013-02-01 00:00:00
abstract::Electrical conductivity and permittivity of biological tissues are important diagnostic parameters and are useful for calculating subject-specific specific absorption rate distribution. On the other hand, water proton density also has clinical relevance for diagnosis purposes. These two kinds of tissue properties are ...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/TMI.2016.2547988
更新日期:2016-09-01 00:00:00
abstract::In the PET system a block detector, which is a position-sensitive photomultiplier (PMT) tube coupled to four arrays of 1.7-mm-wide BGO crystals, is utilized. Fifteen block detectors are positioned to form a 35-cm-diameter ring, with four BGO arrays coupled to each PMT. This provides four detector rings, giving the sys...
journal_title:IEEE transactions on medical imaging
pub_type: 杂志文章
doi:10.1109/42.192694
更新日期:1992-01-01 00:00:00