SlicerDMRI: Open Source Diffusion MRI Software for Brain Cancer Research.

Abstract:

:Diffusion MRI (dMRI) is the only noninvasive method for mapping white matter connections in the brain. We describe SlicerDMRI, a software suite that enables visualization and analysis of dMRI for neuroscientific studies and patient-specific anatomic assessment. SlicerDMRI has been successfully applied in multiple studies of the human brain in health and disease, and here, we especially focus on its cancer research applications. As an extension module of the 3D Slicer medical image computing platform, the SlicerDMRI suite enables dMRI analysis in a clinically relevant multimodal imaging workflow. Core SlicerDMRI functionality includes diffusion tensor estimation, white matter tractography with single and multi-fiber models, and dMRI quantification. SlicerDMRI supports clinical DICOM and research file formats, is open-source and cross-platform, and can be installed as an extension to 3D Slicer (www.slicer.org). More information, videos, tutorials, and sample data are available at dmri.slicer.org Cancer Res; 77(21); e101-3. ©2017 AACR.

journal_name

Cancer Res

journal_title

Cancer research

authors

Norton I,Essayed W,Zhang F,Pujol S,Yarmarkovich A,Golby AJ,Kindlmann G,Wassermann D,Estepar RSJ,Rathi Y,Pieper S,Kikinis R,Johnson HJ,Westin CF,O'Donnell LJ

doi

10.1158/0008-5472.CAN-17-0332

subject

Has Abstract

pub_date

2017-11-01 00:00:00

pages

e101-e103

issue

21

eissn

0008-5472

issn

1538-7445

pii

77/21/e101

journal_volume

77

pub_type

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