Using Prokaryotes for Carbon Capture Storage.

Abstract:

:Geological storage of CO2 is a fast-developing technology that can mitigate rising carbon emissions. However, there are environmental concerns with the long-term storage and implications of a leak from a carbon capture storage (CCS) site. Traditional monitoring lacks clear protocols and relies heavily on physical methods. Here, we discuss the potential of biotechnology, focusing on microbes with a natural ability to utilize and assimilate CO2 through different metabolic pathways. We propose the use of natural microbial communities for CCS monitoring and CO2 utilization, and, with examples, demonstrate how synthetic biology may maximize CO2 uptake within and above storage sites. An integrated physical and biological approach, combined with metagenomics data and biotechnological advances, will enhance CO2 sequestration and prevent large-scale leakages.

journal_name

Trends Biotechnol

journal_title

Trends in biotechnology

authors

Hicks N,Vik U,Taylor P,Ladoukakis E,Park J,Kolisis F,Jakobsen KS

doi

10.1016/j.tibtech.2016.06.011

subject

Has Abstract

pub_date

2017-01-01 00:00:00

pages

22-32

issue

1

eissn

0167-7799

issn

1879-3096

pii

S0167-7799(16)30093-2

journal_volume

35

pub_type

杂志文章
  • Targeted gene therapy: frontiers in the development of 'smart drugs'.

    abstract::Chronic diseases, particularly malignancies and immune-mediated inflammatory diseases (IMIDs), are a challenging frontier for clinical diagnosis and treatment, as well as for biomedical research. Current treatment regimens are frequently insufficient and thus new treatment strategies are needed. Novel therapies for di...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tibtech.2004.04.001

    authors: Tarner IH,Müller-Ladner U,Fathman CG

    更新日期:2004-06-01 00:00:00

  • Silence of the centromeres--not.

    abstract::Centromeres are a conundrum; although many proteins associated with centomeres are conserved from yeast to humans, the underlying DNA sequence is not. A proposed solution to this problem is that an epigenetic, largely heterochromatic, state be imposed by these proteins. Recent analysis of a human neocentromere and the...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.tibtech.2004.04.015

    authors: Cooke HJ

    更新日期:2004-07-01 00:00:00

  • The biotechnological potential and design of novel carotenoids by gene combination in Escherichia coli.

    abstract::Carotenoids are antioxidants with considerable pharmaceutical potential. More than 600 carotenoid structures are known but their availability is limited owing to practical difficulties associated with chemical synthesis and isolation from microorganisms or plant tissue. To overcome some of these problems, heterologous...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/s0167-7799(99)01307-4

    authors: Sandmann G,Albrecht M,Schnurr G,Knörzer O,Böger P

    更新日期:1999-06-01 00:00:00

  • Enabling the Advanced Bioeconomy through Public Policy Supporting Biofoundries and Engineering Biology.

    abstract::The bioeconomy concept is proliferating globally. However, the enabling roles of biotechnology may be getting sidelined in the strategies of some countries. A goal for engineering biology is alignment with the engineering design cycle to enable more rapid commercialization. This paper considers several policy options ...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.tibtech.2019.03.017

    authors: Kitney R,Adeogun M,Fujishima Y,Goñi-Moreno Á,Johnson R,Maxon M,Steedman S,Ward S,Winickoff D,Philp J

    更新日期:2019-09-01 00:00:00

  • Developing animal models for AIDS research--progress and problems.

    abstract::Tremendous advances in our understanding of the human immunodeficiency viruses (HIVs) have been made through the use of animal models. However, there are limitations inherent in many of the current models that use either nonhuman primates, or viruses other than HIV-1. Researchers continue to search for improved models...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/S0167-7799(00)88925-8

    authors: Lewis AD,Johnson PR

    更新日期:1995-04-01 00:00:00

  • Modular protein engineering for non-viral gene therapy.

    abstract::Despite the recognized potential of viral vectors for gene therapy, growing biological concerns are prompting the exploration of safer, non-viral vectors to deliver therapeutic nucleic acids. In this context, recombinant proteins can be bioproduced on a large scale, without the need for further in vitro modifications,...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tibtech.2004.05.004

    authors: Arís A,Villaverde A

    更新日期:2004-07-01 00:00:00

  • Toward nanoscale genome sequencing.

    abstract::This article reports on the state-of-the-art technologies that sequence DNA using miniaturized devices. The article considers the miniaturization of existing technologies for sequencing DNA and the opportunities for cost reduction that 'on-chip' devices can deliver. The ability to construct nano-scale structures and p...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tibtech.2007.07.001

    authors: Ryan D,Rahimi M,Lund J,Mehta R,Parviz BA

    更新日期:2007-09-01 00:00:00

  • Environmental biocatalysis: from remediation with enzymes to novel green processes.

    abstract::Modern biocatalysis is developing new and precise tools to improve a wide range of production processes, which reduce energy and raw material consumption and generate less waste and toxic side-products. Biocatalysis is also achieving new advances in environmental fields, from enzymatic bioremediation to the synthesis ...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tibtech.2006.04.002

    authors: Alcalde M,Ferrer M,Plou FJ,Ballesteros A

    更新日期:2006-06-01 00:00:00

  • Rethinking production of Taxol® (paclitaxel) using endophyte biotechnology.

    abstract::Taxol® (generic name paclitaxel) represents one of the most clinically valuable natural products known to mankind in the recent past. More than two decades have elapsed since the notable discovery of the first Taxol®-producing endophytic fungus, which was followed by a plethora of reports on other endophytes possessin...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.tibtech.2014.03.011

    authors: Kusari S,Singh S,Jayabaskaran C

    更新日期:2014-06-01 00:00:00

  • EU Failing FAO Challenge to Improve Global Food Security.

    abstract::The announcement that the European Union (EU) had reached an agreement allowing Member States (MS) to ban genetically modified (GM) crops confirms that the EU has chosen to ignore the food security challenge issued to the world by the Food and Agriculture Organization of the United Nations (FAO) in 2009. The FAO sugge...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.tibtech.2016.04.003

    authors: Smyth SJ,Phillips PWB,Kerr WA

    更新日期:2016-07-01 00:00:00

  • Confessions of a bioenergy advocate.

    abstract::Feedstocks that deserve serious consideration for fuels and chemicals are sugarcane, corn, trees and algae. Commercialization of biomass refining is imminent but the wild claims of those who think that bioenergy can replace much of our dependence on foreign oil are appalling. It is naive to view biomass as the panacea...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.tibtech.2003.12.002

    authors: Bungay HR

    更新日期:2004-02-01 00:00:00

  • Carotenoid Biofortification of Crops in the CRISPR Era.

    abstract::Carotenoids are micronutrients important for human health. The continuous improvements in clustered regularly interspaced short palindromic repeats (CRISPR)-based genome-editing techniques make rapid, DNA/transgene-free and targeted multiplex genetic modification a reality, thus promising to accelerate the breeding an...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.tibtech.2020.12.003

    authors: Zheng X,Kuijer HNJ,Al-Babili S

    更新日期:2020-12-29 00:00:00

  • Biosensing with cell phones.

    abstract::Continued progress in cell-phone devices has made them powerful mobile computers, equipped with sophisticated, permanent physical sensors embedded as the default configuration. By contrast, the incorporation of permanent biosensors in cell-phone units has been prevented by the multivocal nature of the stimuli and the ...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.tibtech.2014.03.007

    authors: Preechaburana P,Suska A,Filippini D

    更新日期:2014-07-01 00:00:00

  • Three-Dimensional Hierarchical Wrinkles on Polymer Films: From Chaotic to Ordered Antimicrobial Topographies.

    abstract::Microbial contamination of polymer surfaces has become a significant challenge in domestic, industrial, and biomedical applications. Recent progress in our understanding of how topographical features of different length scales can be used to effectively and selectively control the attachment and proliferation of diffe...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tibtech.2019.12.004

    authors: Nguyen DHK,Bazaka O,Bazaka K,Crawford RJ,Ivanova EP

    更新日期:2020-05-01 00:00:00

  • In vivo-applied functional RNAs as tools in proteomics and genomics research.

    abstract::Non-natural, functional RNA molecules, such as short interfering (si) RNAs, aptazymes, maxizymes and intramers, allow modulation of gene function at the mRNA or protein level. This review discusses recent advances made in the expression and application of these functional RNAs and illustrates how engineered, intracell...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/s0167-7799(02)02063-2

    authors: Famulok M,Verma S

    更新日期:2002-11-01 00:00:00

  • Genetically engineered phytoremediation: one man's trash is another man's transgene.

    abstract::Plant-based environmental remediation, or phytoremediation, has been widely pursued in recent years as a favorable clean-up technology and is an area of intensive scientific investigation. For the vast majority of field applications, vegetative 'phyto-crops' are selected specifically for their capacity for site decont...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tibtech.2004.08.003

    authors: Rugh CL

    更新日期:2004-10-01 00:00:00

  • Graphene and graphene oxide: biofunctionalization and applications in biotechnology.

    abstract::Graphene is the basic building block of 0D fullerene, 1D carbon nanotubes, and 3D graphite. Graphene has a unique planar structure, as well as novel electronic properties, which have attracted great interests from scientists. This review selectively analyzes current advances in the field of graphene bioapplications. I...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tibtech.2011.01.008

    authors: Wang Y,Li Z,Wang J,Li J,Lin Y

    更新日期:2011-05-01 00:00:00

  • Promises and pitfalls of synthetic chromosomes in plants.

    abstract::This review summarizes synthetic chromosome construction in plants and speculates on how they might be applied to various uses in the future, as well as the possible impact for synthetic biology. The procedures to construct foundational platforms for synthetic chromosomes in plants are described, together with some ch...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tibtech.2014.12.010

    authors: Birchler JA

    更新日期:2015-03-01 00:00:00

  • Developments in quantitative mass spectrometry for the analysis of proteome dynamics.

    abstract::Two of the primary responses in a cell when perturbed are modulation of the dynamics of its constituent gene expression and protein abundance to restore steady-state homeostasis. To obtain a detailed model of the restoration of this balance, it is necessary to examine the kinetics of transcription and translation, thu...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tibtech.2012.09.007

    authors: Hughes C,Krijgsveld J

    更新日期:2012-12-01 00:00:00

  • Exploring and exploiting carotenoid accumulation in Dunaliella salina for cell-factory applications.

    abstract::The unicellular alga Dunaliella salina is the most interesting cell factory for the commercial production of beta-carotene because this species accumulates carotenoids to high concentrations. Nevertheless, little is known about the underlying mechanisms of carotenoid accumulation. Here, we review the regulatory mechan...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tibtech.2008.07.002

    authors: Lamers PP,Janssen M,De Vos RC,Bino RJ,Wijffels RH

    更新日期:2008-11-01 00:00:00

  • Unintended effects in genetically modified crops: revealed by metabolomics?

    abstract::In Europe the commercialization of food derived from genetically modified plants has been slow because of the complex regulatory process and the concerns of consumers. Risk assessment is focused on potential adverse effects on humans and the environment, which could result from unintended effects of genetic modificati...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tibtech.2006.01.009

    authors: Rischer H,Oksman-Caldentey KM

    更新日期:2006-03-01 00:00:00

  • Delivery of intrahemocoelic peptides for insect pest management.

    abstract::The extensive use of chemical insecticides for insect pest management has resulted in insecticide resistance now being recorded in >500 species of insects and mites. Although gut-active toxins such as those derived from Bacillus thuringiensis (Bt) have been successfully used for insect pest management, a diverse range...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tibtech.2013.08.001

    authors: Bonning BC,Chougule NP

    更新日期:2014-02-01 00:00:00

  • Allergenicity Assessment of Novel Food Proteins: What Should Be Improved?

    abstract::Allergenicity prediction is one of the most challenging aspects in the safety assessment of foods derived from either biotechnology or novel food proteins. Here we present a bottom-up strategy that defines a priori the specific risk assessment (RA) needs based on a database appropriately built for such purposes. ...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.tibtech.2020.05.011

    authors: Fernandez A,Mills ENC,Koning F,Moreno FJ

    更新日期:2021-01-01 00:00:00

  • Gut Check Time: Antibiotic Delivery Strategies to Reduce Antimicrobial Resistance.

    abstract::Antimicrobial resistance (AMR) has developed into a huge threat to global health, and reducing it is an urgent priority for public health authorities. The importance of a healthy and balanced gut microbiome has been identified as a key protective factor against AMR development, but this can be significantly affected b...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tibtech.2019.10.008

    authors: Kelly SA,Rodgers AM,O'Brien SC,Donnelly RF,Gilmore BF

    更新日期:2020-04-01 00:00:00

  • Apoptosis: target for novel drugs.

    abstract::Targeting apoptotic cell death pathways provides wide-ranging opportunities for the discovery and development of novel drugs. Some targeted therapies that selectively induce apoptosis in cancer cells are already marketed, and numerous pro-apoptotic drugs for treating cancer are currently being developed. The anti-apop...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tibtech.2003.08.006

    authors: Alam JJ

    更新日期:2003-11-01 00:00:00

  • Purification of proteins by adsorption chromatography in expanded beds.

    abstract::Adsorption in stable expanded beds enables proteins to be recovered directly from particulate-containing feedstocks, such as fermentation broths and preparations of disrupted cells, without the need for prior removal of the suspended solids, which would normally result in the blockage of packed beds. The adoption of t...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/0167-7799(94)90046-9

    authors: Chase HA

    更新日期:1994-08-01 00:00:00

  • Harnessing Prefrontal Cognitive Signals for Brain-Machine Interfaces.

    abstract::Brain-machine interfaces (BMIs) enable humans to interact with devices by modulating their brain signals. Despite impressive technological advancements, several obstacles remain. The most commonly used BMI control signals are derived from the brain areas involved in primary sensory- or motor-related processing. Howeve...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tibtech.2017.03.008

    authors: Min BK,Chavarriaga R,Millán JDR

    更新日期:2017-07-01 00:00:00

  • Selection, breeding and engineering of microalgae for bioenergy and biofuel production.

    abstract::Microalgal production technologies are seen as increasingly attractive for bioenergy production to improve fuel security and reduce CO(2) emissions. Photosynthetically derived fuels are a renewable, potentially carbon-neutral and scalable alternative reserve. Microalgae have particular promise because they can be prod...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.tibtech.2011.11.003

    authors: Larkum AW,Ross IL,Kruse O,Hankamer B

    更新日期:2012-04-01 00:00:00

  • Nanopores and nucleic acids: prospects for ultrarapid sequencing.

    abstract::DNA and RNA molecules can be detected as they are driven through a nanopore by an applied electric field at rates ranging from several hundred microseconds to a few milliseconds per molecule. The nanopore can rapidly discriminate between pyrimidine and purine segments along a single-stranded nucleic acid molecule. Nan...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/s0167-7799(00)01426-8

    authors: Deamer DW,Akeson M

    更新日期:2000-04-01 00:00:00

  • Dkk-1-mediated expansion of adult stem cells.

    abstract::Despite the wealth of research on stem-cell biology and therapy, there have been few advances in the ex vivo expansion of adult stem cells. Fetal bovine serum, which can elicit an immune reaction in hosts receiving cellular products, remains essential to the culture methods. Recent work by Prockop et al. suggests that...

    journal_title:Trends in biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.tibtech.2004.05.006

    authors: Horwitz EM

    更新日期:2004-08-01 00:00:00