Strain-level diversity of secondary metabolism in the biocontrol species Aneurinibacillus migulanus.

Abstract:

:Aneurinibacillus migulanus strains Nagano and NCTC 7096 show potential in biocontrol against fungal and fungus-like plant pathogens, including a wide range of Ascomycota, Basidiomycota, and Oomycetes. Differences in terms of the range of pathogens that each strain inhibits, however, suggested that production of a single antibiotic cyclic peptide, gramicidin S (GS), by the two strains, is not the sole mechanism of inhibition. The availability of four sequenced genomes of Aneurinibacillus prompted us to apply genome mining techniques to identify the bioactive potential of A. migulanus and to provide insights into the secondary metabolite arsenal of the genus Aneurinibacillus. Up to eleven secondary metabolite biosynthetic gene clusters were present in the three Aneurinibacillus species. Biosynthetic gene clusters specifying bacteriocins, microcins, non-ribosomal peptides, polyketides, terpenes, phosphonates, lasso peptides and linaridins were identified. Chitinolytic potential and iron metabolism regulation were also investigated. With increasing numbers of biocontrol bacterial genomes being sequenced and mined, the use of approaches similar to those described in this paper will lead to an increase in the numbers of environmentally friendly natural products available to use against plant diseases.

journal_name

Microbiol Res

journal_title

Microbiological research

authors

Alenezi FN,Rekik I,Bełka M,Ibrahim AF,Luptakova L,Jaspars M,Woodward S,Belbahri L

doi

10.1016/j.micres.2015.10.007

subject

Has Abstract

pub_date

2016-01-01 00:00:00

pages

116-24

eissn

0944-5013

issn

1618-0623

pii

S0944-5013(15)30020-3

journal_volume

182

pub_type

杂志文章
  • The new flagella-associated collagen-like proteins ClpB and ClpC of Bacillus amyloliquefaciens FZB42 are involved in bacterial motility.

    abstract::Collagen-like proteins (CLPs) share the distinctive Gly-X-Thr repeating amino acid sequence of animal collagens, and contain N- and C-terminal domain making a collagen-like structure in Bacillus amyloliquefaciens FZB42, a plant growth-promoting rhizobacterium. Our previous study demonstrated that CLPs play important r...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2015.12.004

    authors: Zhao X,Wang R,Shang Q,Hao H,Li Y,Zhang Y,Guo Z,Wang Y,Xie Z

    更新日期:2016-03-01 00:00:00

  • Isolation and initial characterization of the tellurite reducing moderately halophilic bacterium, Salinicoccus sp. strain QW6.

    abstract::Among the 49 strains of moderately halophilic bacteria isolated from the salty environments of Iran, a Gram-positive coccus designated as strain QW6 showed high capacity in the removal of toxic oxyanions of tellurium in a wide range of culture medium factors including pH (5.5-10.5), temperature (25-45 degrees C), vari...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2006.07.010

    authors: Amoozegar MA,Ashengroph M,Malekzadeh F,Reza Razavi M,Naddaf S,Kabiri M

    更新日期:2008-01-01 00:00:00

  • Enhancement of pradimicin production in Actinomadura hibisca P157-2 by metabolic engineering.

    abstract::Actinomadura hibisca P157-2 produces potent antifungal antibiotic pradimicins. To enhance pradimicin production, ACCase from Streptomyces coelicolor and two regulatory genes metK1-sp and afsR-sp from Streptomyces peuticus were overexpressed into A. hibisca using an integration vector pSET152 under the control of the s...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2011.02.007

    authors: Paudel S,Lee HC,Kim BS,Sohng JK

    更新日期:2011-12-20 00:00:00

  • The stuA gene controls development, adaptation, stress tolerance, and virulence of the dermatophyte Trichophyton rubrum.

    abstract::The APSES family, comprising of the transcriptional regulators Asm1p, Phd1p, Sok2p, Efg1p, and StuA, is found exclusively in fungi and has been reported to control several cellular processes in these organisms. However, its function in dermatophytes has not yet been completely understood. Here, we generated two null m...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2020.126592

    authors: Lang EAS,Bitencourt TA,Peres NTA,Lopes L,Silva LG,Cazzaniga RA,Rossi A,Martinez-Rossi NM

    更新日期:2020-12-01 00:00:00

  • Microbial communities and their potential for degradation of dissolved organic carbon in cryoconite hole environments of Himalaya and Antarctica.

    abstract::Cryoconite holes (cylindrical melt-holes on the glacier surface) are important hydrological and biological systems within glacial environments that support diverse microbial communities and biogeochemical processes. This study describes retrievable heterotrophic microbes in cryoconite hole water from three geographica...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2018.01.004

    authors: Sanyal A,Antony R,Samui G,Thamban M

    更新日期:2018-03-01 00:00:00

  • Pathogenicity of a new China variety of Metarhizium anisopliae (M. Anisopliae var. Dcjhyium) to subterranean termite Odontotermes formosanus.

    abstract::The pathogenicity of a new China variety of Metarhizium anisopliae (M. anisopliae var. dcjhyium) against the subterranean termite Odontotermes formosanus and the effect of the fungal fermented solution on hemolymph intracellular calcium were studied in laboratory. Conidia from the M. anisopliae var. dcjhyium were high...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2006.11.009

    authors: Dong C,Zhang J,Huang H,Chen W,Hu Y

    更新日期:2009-01-01 00:00:00

  • Molecular cloning and homology modeling of protocatechuate 3,4-dioxygenase from Pseudomonas marginata.

    abstract::The genes that encode the alpha and beta subunits of protocatechuate 3,4-dioxygenase (3,4-PCD [EC 1.13.11.3]) were cloned from a Pseudomonas marginata genomic library. These genes pcaG and pcaH, were found when screening the library for hydrolase genes. The two open reading frames of the PCD genes could be identified ...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/s0944-5013(96)80004-8

    authors: Petersen E,Zuegg J,Ribbons DW,Schwab H

    更新日期:1996-12-01 00:00:00

  • Mating-type switching and mating-type gene array expression in the methylotrophic yeast Ogataea thermomethanolica TBRC656.

    abstract::The methylotrophic yeast, Ogataea thermomethanolica TBRC656, is an attractive host organism for heterologous protein production owing to the availability of protein expression vectors and a genome-editing tool. In this study, we focused on mating-type switching and gene expression in order to elucidate its sexual life...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2019.126372

    authors: Wongwisansri S,Promdonkoy P,Likhitrattanapisal S,Harnpichanchai P,Fujiyama K,Kaneko Y,Eurwilaichitr L,Ingsriswang S,Tanapongpipat S

    更新日期:2020-02-01 00:00:00

  • PCR-identification of Dunaliella salina (Volvocales, Chlorophyta) and its growth characteristics.

    abstract::The saline pond microalga, Dunaliella salina (Dunal) Teod. maintained in De Walne's (basal) medium under laboratory conditions was confirmed by amplifying the chromosomal DNA of the microalga by PCR with specific primers MA1 and MA2. Seaweed extracts obtained from Sargassum wightii and Ulva lactuca were amended separa...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2006.03.006

    authors: Raja R,Hema Iswarya S,Balasubramanyam D,Rengasamy R

    更新日期:2007-01-01 00:00:00

  • Forest tree associated bacteria for potential biological control of Fusarium solani and of Fusarium kuroshium, causal agent of Fusarium dieback.

    abstract::Although the use of crop-associated bacteria as biological control agents of fungal diseases has gained increasing interest, the biotechnological potential of forest tree-associated microbes and their natural products has scarcely been investigated. The objective of this study was to identify bacteria or bacterial pro...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2020.126440

    authors: Báez-Vallejo N,Camarena-Pozos DA,Monribot-Villanueva JL,Ramírez-Vázquez M,Carrión-Villarnovo GL,Guerrero-Analco JA,Partida-Martínez LP,Reverchon F

    更新日期:2020-05-01 00:00:00

  • Identification of two vicinal operons for the degradation of 2-aminobenzenesulfonate encoded on plasmid pSAH in Alcaligenes sp. strain O-1.

    abstract::Alcaligenes sp. strain O-1 inducibly deaminates 2-aminobenzenesulfonate (ABS) via dioxygenation to 3-sulfocatechol, which is desulfonated during meta ring-cleavage to yield 2-hydroxymuconate. This intermediate is transformed through the oxalocrotonate-branch of the sulfocatechol meta-pathway (Scm). The complete pathwa...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2009.05.006

    authors: Ruff J,Smits TH,Cook AM,Schleheck D

    更新日期:2010-05-30 00:00:00

  • Phytochemicals for human disease: An update on plant-derived compounds antibacterial activity.

    abstract::In recent years, many studies have shown that phytochemicals exert their antibacterial activity through different mechanisms of action, such as damage to the bacterial membrane and suppression of virulence factors, including inhibition of the activity of enzymes and toxins, and bacterial biofilm formation. In this rev...

    journal_title:Microbiological research

    pub_type: 杂志文章,评审

    doi:10.1016/j.micres.2016.12.003

    authors: Barbieri R,Coppo E,Marchese A,Daglia M,Sobarzo-Sánchez E,Nabavi SF,Nabavi SM

    更新日期:2017-03-01 00:00:00

  • Construction of recombinant mercury resistant Acidithiobacillus caldus.

    abstract::A mercury-resistant plasmid of pTMJ212 which was able to shuttle between Acidithiobacillus caldus and Escherichia coli was constructed by inserting the mercury resistant determinants, the mer operon of Acidithiobacillus ferrooxidans, into the IncQ plasmid of pJRD215. pTMJ212 was transferred from Escherichia coli into ...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2010.10.003

    authors: Chen D,Lin J,Che Y,Liu X,Lin J

    更新日期:2011-10-20 00:00:00

  • Sensitive and rapid identification of Vibrio vulnificus by loop-mediated isothermal amplification.

    abstract::Vibrio vulnificus is a serious bacterial pathogen for humans and aquatic animals. We developed a rapid, sensitive and specific identification method for V. vulnificus using loop-mediated isothermal amplification (LAMP) technique. A set of primers, composed of two outer primers and two inner primers, was designed based...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2008.05.002

    authors: Ren CH,Hu CQ,Luo P,Wang QB

    更新日期:2009-01-01 00:00:00

  • Diversity of bacteria, archaea and protozoa in a perchlorate treating bioreactor.

    abstract::A microbial consortium reducing high level of perchlorate was developed and in a fed batch bioreactor using acetate as substrate perchlorate was reduced at 0.25 g/g vss. day. Under stable performance, the microbial community structure of the reactor was analyzed through molecular and phenotypic methods. The diversity ...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2015.04.011

    authors: Anupama VN,Prajeesh PV,Anju S,Priya P,Krishnakumar B

    更新日期:2015-08-01 00:00:00

  • The exoproteome profiles of three Staphylococcus saprophyticus strains reveal diversity in protein secretion contents.

    abstract::Staphylococcus saprophyticus is a gram-positive microorganism responsible for urinary tract infections (UTIs). Although some virulence factors are characterized, such as urease, autolysins, adhesins and hemagglutinins, large-scale proteomic studies have not been performed within this species. We performed the characte...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2018.08.008

    authors: Oliveira AS,Rosa IIR,Novaes E,Oliveira LS,Baeza LC,Borges CL,Marlinghaus L,Soares CMA,Giambiagi-deMarval M,Parente-Rocha JA

    更新日期:2018-11-01 00:00:00

  • Dimethyl adenosine transferase (KsgA) contributes to cell-envelope fitness in Salmonella Enteritidis.

    abstract::We previously reported that inactivation of a universally conserved dimethyl adenosine transferase (KsgA) attenuates virulence and increases sensitivity to oxidative and osmotic stress in Salmonella Enteritidis. Here, we show a role of KsgA in cell-envelope fitness as a potential mechanism underlying these phenotypes ...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2018.08.009

    authors: Chiok KL,Paul NC,Adekanmbi EO,Srivastava SK,Shah DH

    更新日期:2018-11-01 00:00:00

  • Maize rhizosphere in Sichuan, China, hosts plant growth promoting Burkholderia cepacia with phosphate solubilizing and antifungal abilities.

    abstract::Plant growth-promoting rhizobacteria promote plant growth by direct and indirect mechanisms. We isolated twelve bacterial strains showing different degrees of phosphate solubilizing activity from maize rhizosphere. Four isolates solubilized over 300 μg mL⁻¹ phosphate from insoluble Ca₃(PO₄)₂, with isolate SCAUK0330 so...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2013.07.003

    authors: Zhao K,Penttinen P,Zhang X,Ao X,Liu M,Yu X,Chen Q

    更新日期:2014-01-20 00:00:00

  • Purification, characterization, and gene cloning of an alkaline serine protease from a highly virulent strain of the nematode-endoparasitic fungus Hirsutella rhossiliensis.

    abstract::Hirsutella rhossiliensis OWVT-1 has substantial potential as a biocontrol agent against plant-parasitic nematodes. Serine proteases have emerged as a potentially useful factor in the nematode-fungus interactions. When grown in liquid culture with the nematode Panagrellus redivivus as the sole nitrogen source, an extra...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2009.01.003

    authors: Wang B,Liu X,Wu W,Liu X,Li S

    更新日期:2009-01-01 00:00:00

  • Rapid screening of starter cultures for maari based on antifungal properties.

    abstract::Forty Bacillus isolates obtained from maari (used as condiment in Burkina Faso) including 17 B. subtilis, 4 B. circulans, 7 B. pumilus and 6 B. licheniformis were investigated for use as starter cultures in maari production. The isolates were screened by PCR for the sfp gene responsible for the production of the lipop...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2017.11.005

    authors: Kaboré D,Gagnon M,Roy D,Sawadogo-Lingani H,Diawara B,LaPointe G

    更新日期:2018-03-01 00:00:00

  • Composition of bacterial and archaeal communities during landfill refuse decomposition processes.

    abstract::Little is known about the archaeal and the bacterial diversities in a landfill during different phases of decomposition. In this study, the archaeal and the bacterial diversities of Laogang landfill (Shanghai, China) at two different decomposition phases (i.e., initial methanogenic phase (IMP) and stable methanogenic ...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2015.04.009

    authors: Song L,Wang Y,Zhao H,Long DT

    更新日期:2015-12-01 00:00:00

  • Colonization factors of enterotoxigenic E. coli (ETEC) from residents of northern Egypt.

    abstract::Infection caused by enterotoxigenic Escherichia coli (ETEC) poses a serious health problem to children in developing countries. Colonization of the small intestinal mucosa by ETEC strains is mediated by antigenically specific fimbriae, also known as colonization factor antigens (CFA). The importance of this study aris...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/S0944-5013(11)80027-3

    authors: Oyofo BA,el-Etr SH,Wasfy MO,Peruski L,Kay B,Mansour M,Campbell JR,Svennerholm AM,Churilla AM,Murphy JR

    更新日期:1995-11-01 00:00:00

  • The regulatory genes involved in spiramycin and bitespiramycin biosynthesis.

    abstract::Bitespiramycin (biotechnological spiramycin, Bsm) is a new 16-membered macrolide antibiotic produced by Streptomyces spiramyceticus WSJ-1 integrated exogenous genes. The gene cluster for Bsm biosynthesis consists of two parts: spiramycin biosynthetic gene cluster (92 kb) and two exogenous genes including 4"-O-isovaler...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2020.126532

    authors: Dai J,Wang Y,Liu J,He W

    更新日期:2020-11-01 00:00:00

  • Analyses of genetic and pathogenic variability among Botrytis cinerea isolates.

    abstract::Seventy nine isolates of Botrytis cinerea were collected from different host plants and different locations of India and Nepal. All the isolates were identified as B. cinerea based on morphological features and were confirmed using B. cinerea specific primers. Differentiation among the isolates was assessed using morp...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2014.02.012

    authors: Kumari S,Tayal P,Sharma E,Kapoor R

    更新日期:2014-11-01 00:00:00

  • Designer probiotic Lactobacillus plantarum expressing oxalate decarboxylase developed using group II intron degrades intestinal oxalate in hyperoxaluric rats.

    abstract::Increased intestinal absorption of oxalate causes hyperoxaluria, a major risk factor for kidney stone disease. Intestinal colonization of recombinant probiotic bacteria expressing oxalate-degrading gene (OxdC) is an effective therapeutic option for recurrent calcium oxalate (CaOx) stone disease. Therefore, we aimed to...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2018.06.009

    authors: Paul E,Albert A,Ponnusamy S,Mishra SR,Vignesh AG,Sivakumar SM,Sivasamy G,Sadasivam SG

    更新日期:2018-10-01 00:00:00

  • Enhanced molecular visualization of root colonization and growth promotion by Bacillus subtilis EA-CB0575 in different growth systems.

    abstract::Bacillus subtilis EA-CB0575 is a plant growth-promoting bacterium (PGPB) associated with banana and tomato crops. Root colonization is an important trait for PGPB microorganisms and potentiates the bacterial effect related to the mechanisms of plant growth promotion. Therefore, detection of bacterial colonization of r...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2018.08.017

    authors: Posada LF,Álvarez JC,Romero-Tabarez M,de-Bashan L,Villegas-Escobar V

    更新日期:2018-12-01 00:00:00

  • Immune interactions between Drosophila and the pathogen Xenorhabdus.

    abstract::Deciphering host innate immune function and bacterial pathogenic tactics require a system that facilitates both facets of host-pathogen interactions. In recent years, a model that becomes established in dissecting mechanisms of host antibacterial immune response through probing with a potent bacterial pathogen involve...

    journal_title:Microbiological research

    pub_type: 杂志文章,评审

    doi:10.1016/j.micres.2020.126568

    authors: Ozakman Y,Eleftherianos I

    更新日期:2020-11-01 00:00:00

  • Investigation of microbial community structure of a shallow lake after one season copper sulfate algaecide treatment.

    abstract::In present work we described, for the first time, the phylogenic structure of the microbial community in a shallow freshwater lake (Hawk Island Lake, located in the Lower Peninsula of the State of Michigan, U.S.A.) after one season (four times during May to August 2007) of CuSO₄ treatment for algae growth control. The...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2014.08.008

    authors: Song LY,Wang YQ

    更新日期:2015-01-01 00:00:00

  • The yeast-like fungus Aureobasidium thailandense LB01 produces a new biosurfactant using olive oil mill wastewater as an inducer.

    abstract::In this study, the biosurfactant production by an Aureobasidium thailandense LB01 was reported for the first time. Different agro-industrial by-products (corn steep liquor, sugarcane molasses, and olive oil mill wastewater) were evaluated as alternative low-cost substrates. The composition of the culture medium was op...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2017.07.004

    authors: Meneses DP,Gudiña EJ,Fernandes F,Gonçalves LRB,Rodrigues LR,Rodrigues S

    更新日期:2017-11-01 00:00:00

  • Effects of rhizobia and arbuscular mycorrhizal fungi on yield, size distribution and fatty acid of soybean seeds grown under drought stress.

    abstract::Soybean (Glycine max L.) is among the most economically important legumes that provide more than 1/4 of food (for man) and animal feed. However, its yield is comparatively low, most especially under drought stress. The aim of this study therefore was to assess the ability of Rhizobium spp. and mycorrhizal fungi to enh...

    journal_title:Microbiological research

    pub_type: 杂志文章

    doi:10.1016/j.micres.2020.126640

    authors: Igiehon NO,Babalola OO,Cheseto X,Torto B

    更新日期:2021-01-01 00:00:00