High Cooperativity in Negative Feedback can Amplify Noisy Gene Expression.

abstract：:The apparent synchronisation of spatially discrete populations is a well documented phenomenon. However, it is not clear what the governing mechanisms are for this synchrony, and whether they are robust over a range of environmental conditions and patch specific population dynamic behaviours. In this paper, we explore...

journal_title：Bulletin of mathematical biology

authors： Hillary RM,Bees MA

更新日期：2004-11-01 00:00:00

abstract：:A rather complete model of the gluconeogenic pathway was used, with the known separate pools of mitochondrial and cytosolic oxalacetate, malate and aspartate. The fumarase, malate dehydrogenase and glutamate oxalacetate transaminase reactions were assumed to be isotopically actively reversible, but none at isotopic eq...

journal_title：Bulletin of mathematical biology

authors： Rognstad R

更新日期：1995-07-01 00:00:00

abstract：:Developing a quantitative science of sustainability requires bridging mathematical concepts from fields contributing to sustainability science. The concept of substitutability is central to sustainability but is defined differently by different fields. Specifically, economics tends to define substitutability as a marg...

journal_title：Bulletin of mathematical biology

authors： Fenichel EP,Zhao J

更新日期：2015-02-01 00:00:00

abstract：:We study Eigen's quasispecies model in the asymptotic regime where the length of the genotypes goes to [Formula: see text] and the mutation probability goes to 0. A limiting infinite system of differential equations is obtained. We prove convergence of trajectories, as well as convergence of the equilibrium solutions....

journal_title：Bulletin of mathematical biology

authors： Dalmau J

更新日期：2018-07-01 00:00:00

abstract：:A dynamic model for cell differentiation, where cells with internal chemical reaction dynamics interact with each other and replicate was studied. It led to spontaneous differentiation of cells and determination, as discussed in the isologous diversification. The following features of the differentiation were obtained...

journal_title：Bulletin of mathematical biology

authors： Furusawa C,Kaneko K

更新日期：1998-07-01 00:00:00

abstract：:In this paper, a simple semi-discrete (ticks' feeding is assumed to occur only during the summers of each year) model for tick population dynamics is presented. Conditions for existence, uniqueness, and stability of a positive equilibrium are found; the system is then studied numerically using parameter estimates cali...

journal_title：Bulletin of mathematical biology

authors： Ghosh M,Pugliese A

更新日期：2004-11-01 00:00:00

abstract：:We exhibit a stochastic discrete time model that produces the Eigen model (Naturwissenschaften 58:465-523, 1971) in the deterministic and continuous time limits. The model is based on the competition among individuals differing in terms of fecundity but with the same viability. We explicitly write down the Markov matr...

journal_title：Bulletin of mathematical biology

authors： Musso F

更新日期：2011-01-01 00:00:00

abstract：:Although imatinib is an effective treatment for chronic myelogenous leukemia (CML), and nearly all patients treated with imatinib attain some form of remission, imatinib does not completely eliminate leukemia. Moreover, if the imatinib treatment is stopped, most patients eventually relapse (Cortes et al. in Clin. Canc...

journal_title：Bulletin of mathematical biology

authors： Paquin D,Kim PS,Lee PP,Levy D

更新日期：2011-05-01 00:00:00

abstract：:DNA and protein sequence comparisons are performed by a number of computational algorithms. Most of these algorithms search for the alignment of two sequences that optimizes some alignment score. It is an important problem to assess the statistical significance of a given score. In this paper we use newly developed me...

journal_title：Bulletin of mathematical biology

authors： Goldstein L,Waterman MS

更新日期：1992-09-01 00:00:00

abstract：:This paper is concerned with early development of transformed epithelial cells (TECs) in the presence of fibroblasts in the tumor micro-environment. These two types of cells interact by means of cytokines such as transforming growth factor (TGF-beta) and epidermal growth factor (EGF) secreted, respectively, by the TEC...

journal_title：Bulletin of mathematical biology

authors： Kim Y,Friedman A

更新日期：2010-07-01 00:00:00

abstract：:Pseudomonas aeruginosa is a Gram-negative bacterium that is responsible for a wide range of infections in humans. Colonies employ quorum sensing (QS) to coordinate gene expression, including for virulence factors, swarming motility and complex social traits. The QS signalling system of P. aeruginosa is known to involv...

journal_title：Bulletin of mathematical biology

authors： Alfiniyah C,Bees MA,Wood AJ

更新日期：2017-06-01 00:00:00

abstract：:Metaecoepidemic models generalize metapopulation systems, combining local population dynamics with inter-patch migration coupled with an epidemic proliferation. A resource-consumer model is introduced with an ecosystem composed by two patches, in which consumers can freely move. A disease affects resources of the seco...

journal_title：Bulletin of mathematical biology

authors： Moulin T,Perasso A,Venturino E

更新日期：2020-07-07 00:00:00

abstract：:We propose a deterministic continuum model for mixed-culture biofilms. A crucial aspect is that movement of one species is affected by the presence of the other. This leads to a degenerate cross-diffusion system that generalizes an earlier single-species biofilm model. Two derivations of this new model are given. One,...

journal_title：Bulletin of mathematical biology

authors： Rahman KA,Sudarsan R,Eberl HJ

更新日期：2015-11-01 00:00:00

abstract：:The nonlinear response of the simplest irreversible Michaelis-Menten enzyme is considered. In the context of metabolic networks, i.e. in vivo, the enzyme is subject to sustained, frequently time-dependent, input fluxes that keep the system out of equilibrium. The connection between the fluxes and the response is inves...

journal_title：Bulletin of mathematical biology

authors： Torralba AS,Rodríguez Y

更新日期：2006-08-01 00:00:00

abstract：:Fluorescence recovery after photobleaching (FRAP) is used to obtain quantitative information about molecular diffusion and binding kinetics at both cell and tissue levels of organization. FRAP models have been proposed to estimate the diffusion coefficients and binding kinetic parameters of species for a variety of bi...

journal_title：Bulletin of mathematical biology

authors： Lin L,Othmer HG

更新日期：2017-03-01 00:00:00

abstract：:Mechanical cell competition is important during tissue development, cancer invasion, and tissue ageing. Heterogeneity plays a key role in practical applications since cancer cells can have different cell stiffness and different proliferation rates than normal cells. To study this phenomenon, we propose a one-dimension...

journal_title：Bulletin of mathematical biology

authors： Murphy RJ,Buenzli PR,Baker RE,Simpson MJ

更新日期：2020-09-26 00:00:00

abstract：:In this paper a general deterministic discrete-time metapopulation model with a finite number of habitat patches is analysed within the framework of adaptive dynamics. We study a general model and prove analytically that (i) if the resident populations state is a fixed point, then the resident strategy with no migrati...

journal_title：Bulletin of mathematical biology

authors： Parvinen K

更新日期：1999-05-01 00:00:00

abstract：:Two types of behavior have been previously reported in models of immune networks. The typical behavior of simple models, which involve B cells only, is stationary behavior involving several steady states. Finite amplitude perturbations may cause the model to switch between different equilibria. The typical behavior of...

journal_title：Bulletin of mathematical biology

authors： De Boer RJ,Perelson AS,Kevrekidis IG

更新日期：1993-01-01 00:00:00

abstract：:We consider organisms which use a renewal strategy such as run-tumble when moving in space, for example to perform chemotaxis in chemical gradients. We derive a diffusion approximation for the motion, applying a central limit theorem due to Anscombe for renewal-reward processes; this theorem has not previously been ap...

journal_title：Bulletin of mathematical biology

authors： Thygesen UH

更新日期：2016-03-01 00:00:00

abstract：:We develop a numerical method for estimating optimal parameters in a mathematical model of the within-host dynamics of malaria infection. The model consists of a quasilinear system of partial differential equations. Convergence theory for the computed parameters is provided. Following this analysis, we present several...

journal_title：Bulletin of mathematical biology

authors： Thibodeaux JJ,Schlittenhardt TP

更新日期：2011-11-01 00:00:00

abstract：:In this work, we show that a one-dimensional model of the blood flow across the lungs can reproduce the evolution of a bolus versus the time. Solving the differential equation governing the bolus concentration in the framework of this model, we determine the solution which fulfills Gaussian initial boundary conditions...

journal_title：Bulletin of mathematical biology

authors： Le Sech C,Capderou A

更新日期：1996-11-01 00:00:00

abstract：:This study investigates fluid flow and elastic deformation in tissues that are drained by the primary lymphatic system. A model is formulated based on the Rossi hypothesis that states that the primary lymphatic valves, which are formed by overlapping endothelial cells around the circumferential lining of lymphatic cap...

journal_title：Bulletin of mathematical biology

authors： Heppell C,Roose T,Richardson G

更新日期：2015-06-01 00:00:00

abstract：:The amoebae Dictyostelium discoideum aggregate after starvation in a wavelike manner in response to periodic pulses of cyclic AMP (cAMP) secreted by cells which behave as aggregation centers. In addition to autonomous oscillations, the cAMP signaling system that controls aggregation is also capable of excitable behavi...

journal_title：Bulletin of mathematical biology

authors： Goldbeter A

更新日期：2006-07-01 00:00:00

abstract：:Synaptic spines grow as a consequence of the formation of F-actin filaments at the spine head. The dynamics of F-actin in the spine head upon excitation of N-methy-D-aspartate (NMDA) receptors has recently been investigated experimentally, but there is no quantitative account of how these dynamic changes occur upon ac...

journal_title：Bulletin of mathematical biology

authors： Bennett MR,Farnell L,Gibson WG

更新日期：2011-09-01 00:00:00

abstract：:We describe and analyze a periodically-forced difference equation model for malaria in mosquitoes that captures the effects of seasonality and allows the mosquitoes to feed on a heterogeneous population of hosts. We numerically show the existence of a unique globally asymptotically stable periodic orbit and calculate ...

journal_title：Bulletin of mathematical biology

authors： Chitnis N,Hardy D,Smith T

更新日期：2012-05-01 00:00:00

abstract：:We describe a new model for laser-induced retinal damage. Our treatment is prompted by the failure of the traditional approach to accurately describe the image size dependence of laser-induced retinal injuries and by a recently reported study which demonstrated that laser injuries to the retina might not appear for up...

journal_title：Bulletin of mathematical biology

authors： Till SJ,Till J,Milsom PK,Rowlands G

更新日期：2003-07-01 00:00:00

abstract：:A rigorous Bayesian analysis is presented that unifies protein sequence-structure alignment and recognition. Given a sequence, explicit formulae are derived to select (1) its globally most probable core structure from a structure library; (2) its globally most probable alignment to a given core structure; (3) its most...

journal_title：Bulletin of mathematical biology

authors： Lathrop RH,Rogers RG Jr,Smith TF,White JV

更新日期：1998-11-01 00:00:00

abstract：:The fluorescent dye carboxyfluorescein diacetate succinimidyl ester (CFSE) classifies proliferating cell populations into groups according to the number of divisions each cell has undergone (i.e., its division class). The pulse labeling of cells with radioactive thymidine provides a means to determine the distribution...

journal_title：Bulletin of mathematical biology

authors： Lee HY,Perelson AS

更新日期：2008-01-01 00:00:00

abstract：:Over the last 25 years, reforms in undergraduate biology education have transformed the way biology is taught at many institutions of higher education. This has been fueled in part by a burgeoning discipline-based education research community, which has advocated for evidence-based instructional practices based on fin...

journal_title：Bulletin of mathematical biology

authors： Aikens ML

更新日期：2020-05-13 00:00:00

abstract：:The scaling and shift of the gene expression boundary in a developing embryo are two key problems with regard to morphogen gradient formation in developmental biology. In this study, a bigradient model was applied to a nonlinear reaction diffusion system (NRDS) to investigate the location of morphogen gene expression ...

journal_title：Bulletin of mathematical biology

authors： Li WS,Shao YZ

更新日期：2014-06-01 00:00:00