Lung morphometry using hyperpolarized 129 Xe multi-b diffusion MRI with compressed sensing in healthy subjects and patients with COPD.

Abstract:

PURPOSE:To demonstrate the feasibility of compressed sensing (CS) to accelerate the acquisition of hyperpolarized (HP) 129 Xe multi-b diffusion MRI for quantitative assessments of lung microstructural morphometry. METHODS:Six healthy subjects and six chronic obstructive pulmonary disease (COPD) subjects underwent HP 129 Xe multi-b diffusion MRI (b = 0, 10, 20, 30, and 40 s/cm2 ). First, a fully sampled (FS) acquisition of HP 129 Xe multi-b diffusion MRI was conducted in one healthy subject. The acquired FS dataset was retrospectively undersampled in the phase encoding direction, and an optimal twofold undersampled pattern was then obtained by minimizing mean absolute error (MAE) between retrospective CS (rCS) and FS MR images. Next, the FS and CS acquisitions during separate breath holds were performed on five healthy subjects (including the above one). Additionally, the FS and CS synchronous acquisitions during a single breath hold were performed on the sixth healthy subject and one COPD subject. However, only CS acquisitions were conducted in the rest of the five COPD subjects. Finally, all the acquired FS, rCS and CS MR images were used to obtain morphometric parameters, including acinar duct radius (R), acinar lumen radius (r), alveolar sleeve depth (h), mean linear intercept (Lm ), and surface-to-volume ratio (SVR). The Wilcoxon signed-rank test and the Bland-Altman plot were employed to assess the fidelity of the CS reconstruction. Moreover, the t-test was used to demonstrate the effectiveness of the multi-b diffusion MRI with CS in clinical applications. RESULTS:The retrospective results demonstrated that there was no statistically significant difference between rCS and FS measurements using the Wilcoxon signed-rank test (P > 0.05). Good agreement between measurements obtained with the CS and FS acquisitions during separate breath holds was demonstrated in Bland-Altman plots of slice differences. Specifically, the mean biases of the R, r, h, Lm , and SVR between the CS and FS acquisitions were 1.0%, 2.6%, -0.03%, 1.5%, and -5.5%, respectively. Good agreement between measurements with the CS and FS acquisitions was also observed during the single breath-hold experiments. Furthermore, there were significant differences between the morphometric parameters for the healthy and COPD subjects (P < 0.05). CONCLUSIONS:Our study has shown that HP 129 Xe multi-b diffusion MRI with CS could be beneficial in lung microstructural assessments by acquiring less data while maintaining the consistent results with the FS acquisitions.

journal_name

Med Phys

journal_title

Medical physics

authors

Zhang H,Xie J,Xiao S,Zhao X,Zhang M,Shi L,Wang K,Wu G,Sun X,Ye C,Zhou X

doi

10.1002/mp.12944

subject

Has Abstract

pub_date

2018-07-01 00:00:00

pages

3097-3108

issue

7

eissn

0094-2405

issn

2473-4209

journal_volume

45

pub_type

杂志文章
  • A double mirror W/C multilayer monochromator for radiation biology applications.

    abstract::A double-mirror multilayer monochromator was developed for the purpose of irradiating live cell cultures at the Synchrotron Radiation Center, University of Wisconsin-Madison. The monochromator is designed for the soft x-ray region with photon energies between 270 and 2400 eV. Multilayer mirrors with 55 bilayers of W/C...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.598259

    authors: MacKay JF,Pearson DW,Nelms BE,DeLuca PM Jr,Gould MN,Lagally MG

    更新日期:1998-05-01 00:00:00

  • Reference standard and statistical model for intersite and temporal comparisons of CT attenuation in a multicenter quantitative lung study.

    abstract:PURPOSE:The purpose of this study was to detect and analyze anomalies between a large number of computed tomography (CT) scanners, tracked over time, utilized to collect human pulmonary CT data for a national multicenter study: chronic obstructive pulmonary disease genetic epidemiology study (COPDGene). METHODS:A cust...

    journal_title:Medical physics

    pub_type: 杂志文章,多中心研究

    doi:10.1118/1.4747342

    authors: Sieren JP,Newell JD,Judy PF,Lynch DA,Chan KS,Guo J,Hoffman EA

    更新日期:2012-09-01 00:00:00

  • Characteristics of sensitometric curves of radiographic films.

    abstract::A new type of radiographic film, EDR (extended dose range) film, has been recently become available for film dosimetry. It is particularly attractive for composite isodose verification of intensity modulated radiation therapy because of its low sensitivity relative to the more common Kodak XV film. For XV film, the re...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.1568979

    authors: Zhu XR,Yoo S,Jursinic PA,Grimm DF,Lopez F,Rownd JJ,Gillin MT

    更新日期:2003-05-01 00:00:00

  • Resampling: an optimization method for inverse planning in robotic radiosurgery.

    abstract::By design, the range of beam directions in conventional radiosurgery are constrained to an isocentric array. However, the recent introduction of robotic radiosurgery dramatically increases the flexibility of targeting, and as a consequence, beams need be neither coplanar nor isocentric. Such a nonisocentric design per...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.2357020

    authors: Schweikard A,Schlaefer A,Adler JR Jr

    更新日期:2006-11-01 00:00:00

  • Heating patterns of microwave applicators in inhomogeneous arm and thigh phantoms.

    abstract::Heating rate (HR) patterns in cylindrical structures were studied with inhomogeneous limb phantoms. These phantoms, arm and thigh models consisting of fat, bone, and muscle material, were heated with Clini-Therm L, M, and MS applicators at 915 MHz. The thigh model is 18 cm in diameter with 2.65-cm-thick fat on the out...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.596627

    authors: Chou CK,McDougall JA,Chan KW,Luk KH

    更新日期:1991-11-01 00:00:00

  • Beam modeling and verification of a photon beam multisource model.

    abstract::Dose calculations for treatment planning of photon beam radiotherapy require a model of the beam to drive the dose calculation models. The beam shaping process involves scattering and filtering that yield radiation components which vary with collimator settings. The necessity to model these components has motivated th...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.1898485

    authors: Ahnesjö A,Weber L,Murman A,Saxner M,Thorslund I,Traneus E

    更新日期:2005-06-01 00:00:00

  • Large field of view distortion assessment in a low-field MR-linac.

    abstract:PURPOSE:MR-guided radiation therapy (RT) offers unparalleled soft tissue contrast for localization and target tracking. However, MRI distortions may be detrimental to high precision RT. This work characterizes the gradient nonlinearity (GNL) and total distortions over the first year of clinical operation of a 0.35T MR-...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1002/mp.13467

    authors: Nejad-Davarani SP,Kim JP,Du D,Glide-Hurst C

    更新日期:2019-05-01 00:00:00

  • JADA: a graphical user interface for comprehensive internal dose assessment in nuclear medicine.

    abstract:PURPOSE:The main objective of this work was to design a comprehensive dosimetry package that would keep all aspects of internal dose calculation within the framework of a single software environment and that would be applicable for a variety of dose calculation approaches. METHODS:Our MATLAB-based graphical user inter...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.4810963

    authors: Grimes J,Uribe C,Celler A

    更新日期:2013-07-01 00:00:00

  • Modification of the TASMIP x-ray spectral model for the simulation of microfocus x-ray sources.

    abstract:PURPOSE:The availability of accurate and simple models for the estimation of x-ray spectra is of great importance for system simulation, optimization, or inclusion of photon energy information into data processing. There is a variety of publicly available tools for estimation of x-ray spectra in radiology and mammograp...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.4837220

    authors: Sisniega A,Desco M,Vaquero JJ

    更新日期:2014-01-01 00:00:00

  • Automated matching and segmentation of lymphoma on serial CT examinations.

    abstract::In patients with lymphoma, identification and quantification of the tumor extent on serial CT examinations is critical for assessing tumor response to therapy. In this paper, we present a computer method to automatically match and segment lymphomas in follow-up CT images. The method requires that target lymph nodes in...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.2404617

    authors: Yan J,Zhao B,Curran S,Zelenetz A,Schwartz LH

    更新日期:2007-01-01 00:00:00

  • Technical Note: Radiotherapy dose characterization of gel dosimetry using shear wave elasticity imaging.

    abstract:PURPOSE:Radiotherapy is an effective treatment for many types of cancer in clinical settings. Gel dosimetry has the potential to record three-dimensional (3D) dose distribution compared to a conventional ion chamber. As the elasticity of the gel is altered after irradiation due to gel polymerization, we aim to measure ...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1002/mp.14020

    authors: Xie WH,Su CT,Kao YJ,Chang TH,Chang YJ,Yao CH,Hsieh BY

    更新日期:2020-03-01 00:00:00

  • Primary dose in photon beams with lateral electron disequilibrium.

    abstract::It is shown that in narrow monoenergetic photon beams under conditions of lateral electron disequilibrium, primary absorbed dose P(r) is a simple function of beam radius r: P(r) = P lambda.(1 - e(-gamma.r)), where P lambda is the primary dose in broad beams for which complete lateral electron equilibrium exists, and g...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.596741

    authors: Nizin PS,Chang XS

    更新日期:1991-07-01 00:00:00

  • Application of high field magnetic resonance microimaging in polymer gel dosimetry.

    abstract:PURPOSE:The purpose of this work was to examine the suitability of VIPARnd polymer gel-9.4 T magnetic resonance microimaging system for high spatial resolution dose distribution measurements. METHODS:The VIPARnd samples (3 cm in outside diameter and 12 cm in height) were exposed to ionizing radiation by using a linear...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1002/mp.14186

    authors: Skorupa A,Woźnica A,Ciszek M,Staniszewski M,Kijonka M,Kozicki M,Woźniak B,Orlef A,Polański A,Boguszewicz Ł,Sokół M

    更新日期:2020-08-01 00:00:00

  • Selective enhancement filters for nodules, vessels, and airway walls in two- and three-dimensional CT scans.

    abstract::Computer-aided diagnostic (CAD) schemes have been developed to assist radiologists in the early detection of lung cancer in radiographs and computed tomography (CT) images. In order to improve sensitivity for nodule detection, many researchers have employed a filter as a preprocessing step for enhancement of nodules. ...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.1581411

    authors: Li Q,Sone S,Doi K

    更新日期:2003-08-01 00:00:00

  • Technical Note: Influence of Compton currents on profile measurements in small-volume ion chambers.

    abstract:PURPOSE:This work is to evaluate the effects of Compton current generation in three small-volume ionization chambers on measured beam characteristics for electron fields. METHODS:Beam scans were performed using Exradin A16, A26, and PTW 31014 microchambers. Scans with varying chamber components shielded were performed...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.4929555

    authors: Tanny S,Holmes S,Sperling N,Parsai EI

    更新日期:2015-10-01 00:00:00

  • Experimental characterization of the miniannular phased array as a hyperthermia applicator.

    abstract::A series of experiments has been carried out in order to characterize a miniannular phased array applicator prior to possible clinical implementation. The energy deposition patterns over the frequency range of 100 to 200 MHz were determined in several human limb models of different complexities by measuring the electr...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.596037

    authors: Guerquin-Kern JL,Hagmann MJ,Levin RL

    更新日期:1987-07-01 00:00:00

  • Incorporating multi-leaf collimator leaf sequencing into iterative IMRT optimization.

    abstract::Intensity modulated radiation therapy (IMRT) treatment planning typically considers beam optimization and beam delivery as separate tasks. Following optimization, a multi-leaf collimator (MLC) or other beam delivery device is used to generate fluence patterns for patient treatment delivery. Due to limitations and char...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.1477230

    authors: Siebers JV,Lauterbach M,Keall PJ,Mohan R

    更新日期:2002-06-01 00:00:00

  • SU-E-J-100: Feasibility of Dose Calculation Using Combined Information of Cone-Beam and Multi-Slice CT Images.

    abstract:PURPOSE:The purpose of this study is to evaluate the feasibility of kilovoltage cone-beam CT (CBCT) images that are obtained with the Varian On-Board Imager in dose calculation at each radiation therapy. METHODS:CBCT images are commonly degraded by scattered radiations originating in the patient's body, and so the CT ...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.4734936

    authors: Usui K,Ogawa K,Kunieda E

    更新日期:2012-06-01 00:00:00

  • The influence of field strength and different clinical breast MRI protocols on the outcome of texture analysis using foam phantoms.

    abstract:PURPOSE:Texture analysis (TA) has proved to be useful to distinguish different tissues and disease states using magnetic resonance imaging (MRI). TA has been successfully applied clinically to improve identification of abnormalities in the brain, liver, and bone and, more recently, has been used to enhance the specific...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.3622605

    authors: Waugh SA,Lerski RA,Bidaut L,Thompson AM

    更新日期:2011-09-01 00:00:00

  • A dosimetry study of the Oncoseed 6711 using glass rod dosimeters and EGS5 Monte Carlo code in a geometry lacking radiation equilibrium scatter conditions.

    abstract:PURPOSE:The aim of this study was to develop a dose calculation method which is applicable to the interseed attenuation and the geometry lacking the equilibrium radiation scatter conditions in brachytherapy. METHODS:The dose obtained from measurement with a radiophotoluminescent glass rod dosimeter (GRD) was compared ...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.3590370

    authors: Tanaka K,Tateoka K,Asanuma O,Kamo K,Bengua G,Sato K,Ueda T,Takeda H,Takagi M,Hareyama M,Takada J

    更新日期:2011-06-01 00:00:00

  • A strategy to decrease partial scan reconstruction artifacts in myocardial perfusion CT: phantom and in vivo evaluation.

    abstract:PURPOSE:Partial scan reconstruction (PSR) artifacts are present in myocardial perfusion imaging using dynamic multidetector computed tomography (MDCT). PSR artifacts appear as temporal CT number variations due to inconsistencies in the angular data range used to reconstruct images and compromise the quantitative value ...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.3665767

    authors: Ramirez-Giraldo JC,Yu L,Kantor B,Ritman EL,McCollough CH

    更新日期:2012-01-01 00:00:00

  • Transrectal ultrasound based prostate volume determination: is the frustum algorithm more accurate than planimetry?

    abstract:PURPOSE:To compare reconstructed volumes calculated via planimetry and frustum algorithms in the context of stepped transrectal ultrasound (US) imaging, and to estimate the reconstruction error for prostate volumes. METHODS:Prostate contours for 40 permanent implant patients were delineated on magnetic resonance (MR) ...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.4789920

    authors: Liu D,Usmani N,Sloboda RS

    更新日期:2013-03-01 00:00:00

  • Discriminating solitary cysts from soft tissue lesions in mammography using a pretrained deep convolutional neural network.

    abstract:PURPOSE:It is estimated that 7% of women in the western world will develop palpable breast cysts in their lifetime. Even though cysts have been correlated with risk of developing breast cancer, many of them are benign and do not require follow-up. We develop a method to discriminate benign solitary cysts from malignant...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1002/mp.12110

    authors: Kooi T,van Ginneken B,Karssemeijer N,den Heeten A

    更新日期:2017-03-01 00:00:00

  • Model-based geometric calibration for medical x-ray systems.

    abstract:PURPOSE:Currently applied calibration approaches lead to satisfying 3D roadmapping overlay and 3D reconstruction accuracies; however, the required calibration times are extensive. The aim of this paper is the introduction of a novel model-based approach for geometric system calibrations, leading to a significant reduct...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.4931964

    authors: van der Maas R,de Jager B,Steinbuch M,Dries J

    更新日期:2015-11-01 00:00:00

  • Differences among Monte Carlo codes in the calculations of voxel S values for radionuclide targeted therapy and analysis of their impact on absorbed dose evaluations.

    abstract::Several updated Monte Carlo (MC) codes are available to perform calculations of voxel S values for radionuclide targeted therapy. The aim of this work is to analyze the differences in the calculations obtained by different MC codes and their impact on absorbed dose evaluations performed by voxel dosimetry. Voxel S val...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.3103401

    authors: Pacilio M,Lanconelli N,Lo MS,Betti M,Montani L,Torres AL,Coca PM

    更新日期:2009-05-01 00:00:00

  • Toward adaptive radiotherapy for head and neck patients: Uncertainties in dose warping due to the choice of deformable registration algorithm.

    abstract:PURPOSE:The aims of this work were to evaluate the performance of several deformable image registration (DIR) algorithms implemented in our in-house software (NiftyReg) and the uncertainties inherent to using different algorithms for dose warping. METHODS:The authors describe a DIR based adaptive radiotherapy workflow...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.4905050

    authors: Veiga C,Lourenço AM,Mouinuddin S,van Herk M,Modat M,Ourselin S,Royle G,McClelland JR

    更新日期:2015-02-01 00:00:00

  • SU-F-BRCD-06: Multiple Anatomy Optimization of Accumulated Dose.

    abstract:PURPOSE:Multiple anatomy optimization (MAO) utilizing deformable dose accumulation on entire 4DCT data sets is implemented to overcome ambiguity between optimal dose defined on a single anatomy and optimal accumulated dose resulting from dose delivery to moving and deforming anatomy. METHODS:Six lung cancer patients a...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.4735744

    authors: Watkins WT,Moore JA,Sharma M,Dial C,Xu H,Hugo GD,Gordon JJ,Siebers JV

    更新日期:2012-06-01 00:00:00

  • SU-D-BRCD-02: A Novel Cylindrical 3D Water Scanner for Beam Data Collection: I. Validation of the Automatic-Setup.

    abstract:PURPOSE:To determine the accuracy and reproducibility of the automatic- setup procedure of a 3D water scanner (3D SCANNER, Sun Nuclear Corp). The procedure automatically aligns the scanner's coordinate system to the Linac coordinate system. A unique off-center detector holder extends the scan range to 630 mm, eliminati...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.4734668

    authors: Li J,Lu B,Yan G,Huang Y,Liu C

    更新日期:2012-06-01 00:00:00

  • Comparison of two methods for accurate measurement of modulation transfer functions of screen-film systems.

    abstract::The modulation transfer function (MTF) of a screen-film system can be measured by two methods, i.e., a slit method with Fourier transform on the line spread function and a square-wave response function (SWRF) method. However, it is still uncertain whether MTFs obtained by the two methods are identical. In this study, ...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.597456

    authors: Morishita J,Doi K,Bollen R,Bunch PC,Hoeschen D,Sirand-rey G,Sukenobu Y

    更新日期:1995-02-01 00:00:00

  • Photon attenuation in computed tomography.

    abstract::The analysis and understanding of results of computed tomography (CT) require an understanding of photon attenuation in matter. The high sensitivity and resolution of these devices coupled with the use of a polychromatic photon source require a level and breadth of understanding about photon attenuation not usually re...

    journal_title:Medical physics

    pub_type: 杂志文章

    doi:10.1118/1.594199

    authors: McCullough EC

    更新日期:1975-11-01 00:00:00