E. coli and M. luteus DNA topoisomerase I can catalyze catenation of decatenation of double-stranded DNA rings.

Abstract:

:Escherichia coli and Micrococcus luteus DNA topoisomerase I are found to promote catenation of double-stranded DNA rings. At low DNA concentration dimeric catenanes are the major catenated products; at high DNA concentration or when spermidine is present, catenanes containing more than two rings are formed. There is no requirement of extensive sequence homology between the conponent rings forming a catenane; dimeric catenanes between Pseudomonas phage PM2 DNA and E. coli plasmid pBR322 are readily formed. The formation of a dimeric catenane by these type I topoisomerases, however, requires the presence of at least one preexisting single-chain scission in one of the two component rings. This is in contrast to the cases with the type II DNA topoisomerases which can form catenanes made of covalently closed rings only. The catenanes formed by the type I enzymes can be unlinked by the same enzymes, or by DNA gyrase, a type II enzyme, upon dilution of the isolated catenanes. The catenation and decatenation of duplex DNA rings adds a fourth type of reaction promoted by these type I DNA topoisomerases to the three reported previously: relaxation of superhelical DNA, interconversion between single-stranded DNA rings with and without knots and the intertwining of single-stranded DNA rings of complementary sequences into a covalently closed duplex ring with a high linking number. All four topoisomerization reactions involve the crossing of one DNA strand through a transient break of another DNA strand. The new reaction reported here suggests that such a crossover event might not require pairing of complementary nucleotide sequences.

journal_name

Cell

journal_title

Cell

authors

Tse Y,Wang JC

doi

10.1016/0092-8674(80)90174-9

subject

Has Abstract

pub_date

1980-11-01 00:00:00

pages

269-76

issue

1 Pt 1

eissn

0092-8674

issn

1097-4172

pii

0092-8674(80)90174-9

journal_volume

22

pub_type

杂志文章

相关文献

CELL文献大全
  • The epithelial cell-derived atopic dermatitis cytokine TSLP activates neurons to induce itch.

    abstract::Atopic dermatitis (AD) is a chronic itch and inflammatory disorder of the skin that affects one in ten people. Patients suffering from severe AD eventually progress to develop asthma and allergic rhinitis, in a process known as the "atopic march." Signaling between epithelial cells and innate immune cells via the cyto...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2013.08.057

    authors: Wilson SR,Thé L,Batia LM,Beattie K,Katibah GE,McClain SP,Pellegrino M,Estandian DM,Bautista DM

    更新日期:2013-10-10 00:00:00

  • Concerted evolution of tRNA genes: intergenic conversion among three unlinked serine tRNA genes in S. pombe.

    abstract::In many cases the multiple genes coding for one specific tRNA are dispersed throughout the genome. The members of such a gene family nevertheless maintain a common nucleotide sequence during evolution. A major mechanism contributing to this concerted evolution is intergenic conversion. Here we show that it occurs betw...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(85)90347-2

    authors: Amstutz H,Munz P,Heyer WD,Leupoid U,Kohli J

    更新日期:1985-04-01 00:00:00

  • Mnd2, an essential antagonist of the anaphase-promoting complex during meiotic prophase.

    abstract::Meiotic cohesin serves in sister chromatid linkage and DNA repair until its subunit Rec8 is cleaved by separase. Separase is activated when its inhibitor, securin, is polyubiquitinated by the Cdc20 regulated anaphase-promoting complex (APC(Cdc20)) and consequently degraded. Differently regulated APCs (APC(Cdh1), APC(A...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2005.01.017

    authors: Penkner AM,Prinz S,Ferscha S,Klein F

    更新日期:2005-03-25 00:00:00

  • CRISPR-Cas9 knockin mice for genome editing and cancer modeling.

    abstract::CRISPR-Cas9 is a versatile genome editing technology for studying the functions of genetic elements. To broadly enable the application of Cas9 in vivo, we established a Cre-dependent Cas9 knockin mouse. We demonstrated in vivo as well as ex vivo genome editing using adeno-associated virus (AAV)-, lentivirus-, or parti...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2014.09.014

    authors: Platt RJ,Chen S,Zhou Y,Yim MJ,Swiech L,Kempton HR,Dahlman JE,Parnas O,Eisenhaure TM,Jovanovic M,Graham DB,Jhunjhunwala S,Heidenreich M,Xavier RJ,Langer R,Anderson DG,Hacohen N,Regev A,Feng G,Sharp PA,Zhang F

    更新日期:2014-10-09 00:00:00

  • Structural changes enable start codon recognition by the eukaryotic translation initiation complex.

    abstract::During eukaryotic translation initiation, initiator tRNA does not insert fully into the P decoding site on the 40S ribosomal subunit. This conformation (POUT) is compatible with scanning mRNA for the AUG start codon. Base pairing with AUG is thought to promote isomerization to a more stable conformation (PIN) that arr...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2014.10.001

    authors: Hussain T,Llácer JL,Fernández IS,Munoz A,Martin-Marcos P,Savva CG,Lorsch JR,Hinnebusch AG,Ramakrishnan V

    更新日期:2014-10-23 00:00:00

  • Drug-Driven Phenotypic Convergence Supports Rational Treatment Strategies of Chronic Infections.

    abstract::Chronic Pseudomonas aeruginosa infections evade antibiotic therapy and are associated with mortality in cystic fibrosis (CF) patients. We find that in vitro resistance evolution of P. aeruginosa toward clinically relevant antibiotics leads to phenotypic convergence toward distinct states. These states are associated w...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2017.12.012

    authors: Imamovic L,Ellabaan MMH,Dantas Machado AM,Citterio L,Wulff T,Molin S,Krogh Johansen H,Sommer MOA

    更新日期:2018-01-11 00:00:00

  • Inactivation of CDK12 Delineates a Distinct Immunogenic Class of Advanced Prostate Cancer.

    abstract::Using integrative genomic analysis of 360 metastatic castration-resistant prostate cancer (mCRPC) samples, we identified a novel subtype of prostate cancer typified by biallelic loss of CDK12 that is mutually exclusive with tumors driven by DNA repair deficiency, ETS fusions, and SPOP mutations. CDK12 loss is enriched...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2018.04.034

    authors: Wu YM,Cieślik M,Lonigro RJ,Vats P,Reimers MA,Cao X,Ning Y,Wang L,Kunju LP,de Sarkar N,Heath EI,Chou J,Feng FY,Nelson PS,de Bono JS,Zou W,Montgomery B,Alva A,PCF\/SU2C International Prostate Cancer Dream Team.,Robins

    更新日期:2018-06-14 00:00:00

  • SARA-regulated vesicular targeting underlies formation of the light-sensing organelle in mammalian rods.

    abstract::The light-sensing organelle of the vertebrate rod photoreceptor, the outer segment (OS), is a modified cilium containing approximately 1,000 stacked disc membranes that are densely packed with visual pigment rhodopsin. The mammalian OS is renewed every ten days; new discs are assembled at the base of the OS by a poorl...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2007.06.030

    authors: Chuang JZ,Zhao Y,Sung CH

    更新日期:2007-08-10 00:00:00

  • Metabolic Instruction of Immunity.

    abstract::Choices have consequences. Immune cells survey and migrate throughout the body and sometimes take residence in niche environments with distinct communities of cells, extracellular matrix, and nutrients that may differ from those in which they matured. Imbedded in immune cell physiology are metabolic pathways and metab...

    journal_title:Cell

    pub_type: 杂志文章,评审

    doi:10.1016/j.cell.2017.04.004

    authors: Buck MD,Sowell RT,Kaech SM,Pearce EL

    更新日期:2017-05-04 00:00:00

  • TGF-β promotes heterogeneity and drug resistance in squamous cell carcinoma.

    abstract::Subsets of long-lived, tumor-initiating stem cells often escape cancer therapies. However, sources and mechanisms that generate tumor heterogeneity and drug-resistant cell population are still unfolding. Here, we devise a functional reporter system to lineage trace and/or genetic ablate signaling in TGF-β-activated sq...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2015.01.043

    authors: Oshimori N,Oristian D,Fuchs E

    更新日期:2015-02-26 00:00:00

  • The cryb mutation identifies cryptochrome as a circadian photoreceptor in Drosophila.

    abstract::A new rhythm mutation was isolated based on its elimination of per-controlled luciferase cycling. Levels of period or timeless clock gene products in the mutant are flat in daily light-dark cycles or constant darkness (although PER and TIM oscillate normally in temperature cycles). Consistent with the fact that light ...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/s0092-8674(00)81638-4

    authors: Stanewsky R,Kaneko M,Emery P,Beretta B,Wager-Smith K,Kay SA,Rosbash M,Hall JC

    更新日期:1998-11-25 00:00:00

  • Congenital immunodeficiency with a regulatory defect in MHC class II gene expression lacks a specific HLA-DR promoter binding protein, RF-X.

    abstract::The expression of MHC class II genes is tightly regulated. One form of congenital severe combined immunodeficiency (SCID) is characterized by a regulatory defect that precludes expression of HLA class II genes. B lymphocyte cell lines from such SCID patients provide a tool for identifying putative regulatory proteins ...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/s0092-8674(88)90389-3

    authors: Reith W,Satola S,Sanchez CH,Amaldi I,Lisowska-Grospierre B,Griscelli C,Hadam MR,Mach B

    更新日期:1988-06-17 00:00:00

  • TGF-beta signaling specifies axons during brain development.

    abstract::In the mammalian brain, the specification of a single axon and multiple dendrites occurs early in the differentiation of most neuron types. Numerous intracellular signaling events for axon specification have been described in detail. However, the identity of the extracellular factor(s) that initiate neuronal polarity ...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2010.06.010

    authors: Yi JJ,Barnes AP,Hand R,Polleux F,Ehlers MD

    更新日期:2010-07-09 00:00:00

  • An active tissue-specific enhancer and bound transcription factors existing in a precisely positioned nucleosomal array.

    abstract::Nucleosomes positioned over promoters are usually inhibitory to protein binding and activity. We analyzed at the nucleotide level of resolution the nucleosomal organization of a distal, liver-specific enhancer in various mouse tissues and found that the enhancer exists in an array of three precisely positioned nucleos...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(93)80079-t

    authors: McPherson CE,Shim EY,Friedman DS,Zaret KS

    更新日期:1993-10-22 00:00:00

  • Epigenetic codes for heterochromatin formation and silencing: rounding up the usual suspects.

    abstract::Recent results from diverse organisms point to a self-reinforcing network of interactions among the three best-characterized covalent modifications that mark heterochromatin: histone hypoacetylation, histone H3-Lys9 methylation, and cytosine methylation. These modification systems suggest a mechanistic basis for sprea...

    journal_title:Cell

    pub_type: 杂志文章,评审

    doi:10.1016/s0092-8674(02)00644-x

    authors: Richards EJ,Elgin SC

    更新日期:2002-02-22 00:00:00

  • Evidence for a common evolutionary origin of inverted repeat transposons in Drosophila and plants: hobo, Activator, and Tam3.

    abstract::We have sequenced HFL1 from D. melanogaster, the only cloned hobo element shown to have transposase activity. The 2959 bp HFL1 sequence predicts a 2.0 kb open reading frame (ORF1) with substantial amino acid similarity to the transposases of Activator (Ac) from maize (Zea mays) and Tam3 from snapdragon (Antirrhinum ma...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(81)90010-6

    authors: Calvi BR,Hong TJ,Findley SD,Gelbart WM

    更新日期:1991-08-09 00:00:00

  • A signaling principle for the specification of the germ cell lineage in mice.

    abstract::Specification of the germ cell lineage is vital to development and heredity. In mice, the germ cell fate is induced in pluripotent epiblast cells by signaling molecules, yet the underlying mechanism remains unknown. Here we demonstrate that germ cell fate in the epiblast is a direct consequence of Bmp4 signaling from ...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2009.03.014

    authors: Ohinata Y,Ohta H,Shigeta M,Yamanaka K,Wakayama T,Saitou M

    更新日期:2009-05-01 00:00:00

  • SnapShot: Electrochemical Communication in Biofilms.

    abstract::The role of electricity in biological systems was first appreciated through electrical stimulation experiments performed by Luigi Galvani in the 18th century. These pioneering experiments demonstrated that the behavior of living tissues is governed by the flow of electrochemical species-an insight that gave rise to th...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2017.06.026

    authors: Lee DD,Prindle A,Liu J,Süel GM

    更新日期:2017-06-29 00:00:00

  • Metformin retards aging in C. elegans by altering microbial folate and methionine metabolism.

    abstract::The biguanide drug metformin is widely prescribed to treat type 2 diabetes and metabolic syndrome, but its mode of action remains uncertain. Metformin also increases lifespan in Caenorhabditis elegans cocultured with Escherichia coli. This bacterium exerts complex nutritional and pathogenic effects on its nematode pre...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2013.02.035

    authors: Cabreiro F,Au C,Leung KY,Vergara-Irigaray N,Cochemé HM,Noori T,Weinkove D,Schuster E,Greene ND,Gems D

    更新日期:2013-03-28 00:00:00

  • Blinded by the Light: The Growing Complexity of p53.

    abstract::While the tumor suppressor functions of p53 have long been recognized, the contribution of p53 to numerous other aspects of disease and normal life is only now being appreciated. This burgeoning range of responses to p53 is reflected by an increasing variety of mechanisms through which p53 can function, although the a...

    journal_title:Cell

    pub_type: 杂志文章,评审

    doi:10.1016/j.cell.2009.04.037

    authors: Vousden KH,Prives C

    更新日期:2009-05-01 00:00:00

  • Mosaic analysis with double markers reveals tumor cell of origin in glioma.

    abstract::Cancer cell of origin is difficult to identify by analyzing cells within terminal stage tumors, whose identity could be concealed by the acquired plasticity. Thus, an ideal approach to identify the cell of origin is to analyze proliferative abnormalities in distinct lineages prior to malignancy. Here, we use mosaic an...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2011.06.014

    authors: Liu C,Sage JC,Miller MR,Verhaak RG,Hippenmeyer S,Vogel H,Foreman O,Bronson RT,Nishiyama A,Luo L,Zong H

    更新日期:2011-07-22 00:00:00

  • Abate and switch: miR-145 in stem cell differentiation.

    abstract::MicroRNAs have been implicated as regulators of embryonic stem (ES) cell self-renewal and pluripotency. In this issue, Xu et al. (2009) demonstrate that miR-145 facilitates ES cell differentiation by repressing the core pluripotency factors OCT4, SOX2, and KLF4, thereby silencing the self-renewal program. ...

    journal_title:Cell

    pub_type: 评论,杂志文章

    doi:10.1016/j.cell.2009.04.059

    authors: Chivukula RR,Mendell JT

    更新日期:2009-05-15 00:00:00

  • Crystallographic analysis of anti-p24 (HIV-1) monoclonal antibody cross-reactivity and polyspecificity.

    abstract::The X-ray crystal structures of an anti-p24 (HIV-1) monoclonal antibody Fab fragment alone and in complexes with the epitope peptide GATPQDLNTnL (n = norleucine), an epitope-homologous peptide GATPEDLNQKLAGN, as well as two unrelated peptides GLYEWGGARITNTD and efslkGpllqwrsG (D-peptide), are presented to a maximum re...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/s0092-8674(00)80469-9

    authors: Keitel T,Kramer A,Wessner H,Scholz C,Schneider-Mergener J,Höhne W

    更新日期:1997-12-12 00:00:00

  • A new role for a yeast transcriptional silencer gene, SIR2, in regulation of recombination in ribosomal DNA.

    abstract::The yeast SIR2 gene is involved in regulating nucleosome phasing and transcription in the mating type system. We have found that SIR2 also plays another important role in the cell. Specifically, in wild-type SIR2 strains recombination between the tandemly repeated ribosomal RNA genes is depressed. In sir2 mutants, bot...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(89)90681-8

    authors: Gottlieb S,Esposito RE

    更新日期:1989-03-10 00:00:00

  • Dual Functions of a Rubisco Activase in Metabolic Repair and Recruitment to Carboxysomes.

    abstract::Rubisco, the key enzyme of CO2 fixation in photosynthesis, is prone to inactivation by inhibitory sugar phosphates. Inhibited Rubisco undergoes conformational repair by the hexameric AAA+ chaperone Rubisco activase (Rca) in a process that is not well understood. Here, we performed a structural and mechanistic analysis...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2020.09.010

    authors: Flecken M,Wang H,Popilka L,Hartl FU,Bracher A,Hayer-Hartl M

    更新日期:2020-10-15 00:00:00

  • Yeast Ataxin-2 Forms an Intracellular Condensate Required for the Inhibition of TORC1 Signaling during Respiratory Growth.

    abstract::Yeast ataxin-2, also known as Pbp1 (polyA binding protein-binding protein 1), is an intrinsically disordered protein implicated in stress granule formation, RNA biology, and neurodegenerative disease. To understand the endogenous function of this protein, we identify Pbp1 as a dedicated regulator of TORC1 signaling an...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2019.02.043

    authors: Yang YS,Kato M,Wu X,Litsios A,Sutter BM,Wang Y,Hsu CH,Wood NE,Lemoff A,Mirzaei H,Heinemann M,Tu BP

    更新日期:2019-04-18 00:00:00

  • Adaptation to P element transposon invasion in Drosophila melanogaster.

    abstract::Transposons evolve rapidly and can mobilize and trigger genetic instability. Piwi-interacting RNAs (piRNAs) silence these genome pathogens, but it is unclear how the piRNA pathway adapts to invasion of new transposons. In Drosophila, piRNAs are encoded by heterochromatic clusters and maternally deposited in the embryo...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2011.11.042

    authors: Khurana JS,Wang J,Xu J,Koppetsch BS,Thomson TC,Nowosielska A,Li C,Zamore PD,Weng Z,Theurkauf WE

    更新日期:2011-12-23 00:00:00

  • Cellular uptake of the tat protein from human immunodeficiency virus.

    abstract::While developing an assay to measure the activity of the tat protein from human immunodeficiency virus 1 (HIV-1), we discovered that the purified protein could be taken up by cells growing in tissue culture and subsequently trans-activate the viral promoter. Trans-activation is dramatically increased by a variety of l...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(88)90263-2

    authors: Frankel AD,Pabo CO

    更新日期:1988-12-23 00:00:00

  • A role for casein kinase 2 in the mechanism underlying circadian temperature compensation.

    abstract::Temperature compensation of circadian clocks is an unsolved problem with relevance to the general phenomenon of biological compensation. We identify casein kinase 2 (CK2) as a key regulator of temperature compensation of the Neurospora clock by determining that two long-standing clock mutants, chrono and period-3, dis...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2009.03.019

    authors: Mehra A,Shi M,Baker CL,Colot HV,Loros JJ,Dunlap JC

    更新日期:2009-05-15 00:00:00

  • Physiologic Medium Rewires Cellular Metabolism and Reveals Uric Acid as an Endogenous Inhibitor of UMP Synthase.

    abstract::A complex interplay of environmental factors impacts the metabolism of human cells, but neither traditional culture media nor mouse plasma mimic the metabolite composition of human plasma. Here, we developed a culture medium with polar metabolite concentrations comparable to those of human plasma (human plasma-like me...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2017.03.023

    authors: Cantor JR,Abu-Remaileh M,Kanarek N,Freinkman E,Gao X,Louissaint A Jr,Lewis CA,Sabatini DM

    更新日期:2017-04-06 00:00:00