Epigenetic codes for heterochromatin formation and silencing: rounding up the usual suspects.

Abstract:

:Recent results from diverse organisms point to a self-reinforcing network of interactions among the three best-characterized covalent modifications that mark heterochromatin: histone hypoacetylation, histone H3-Lys9 methylation, and cytosine methylation. These modification systems suggest a mechanistic basis for spreading of heterochromatin over large domains and for stable epigenetic inheritance of the silent state. All three modifications used in packaging heterochromatin are also used in stable silencing of euchromatic genes.

journal_name

Cell

journal_title

Cell

authors

Richards EJ,Elgin SC

doi

10.1016/s0092-8674(02)00644-x

subject

Has Abstract

pub_date

2002-02-22 00:00:00

pages

489-500

issue

4

eissn

0092-8674

issn

1097-4172

pii

S009286740200644X

journal_volume

108

pub_type

杂志文章,评审

相关文献

CELL文献大全
  • Senescence in Podospora anserina: amplification of a mitochondrial DNA sequence.

    abstract::Senescence in Podospora anserina has long been shown to be under cytoplasmic control. Comparison of DNAs isolated from young and senescent cultures made it possible to detect the presence, in senescent cultures only, of a specific DNA (SEN-DNA). This DNA consists of repeated sequences arranged in a multimeric set of c...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(80)90126-9

    authors: Jamet-Vierny C,Begel O,Belcour L

    更新日期:1980-08-01 00:00:00

  • Spatial Reconstruction of Single Enterocytes Uncovers Broad Zonation along the Intestinal Villus Axis.

    abstract::The intestinal epithelium is a highly structured tissue composed of repeating crypt-villus units. Enterocytes perform the diverse tasks of absorbing a wide range of nutrients while protecting the body from the harsh bacterium-rich environment. It is unknown whether these tasks are spatially zonated along the villus ax...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2018.08.063

    authors: Moor AE,Harnik Y,Ben-Moshe S,Massasa EE,Rozenberg M,Eilam R,Bahar Halpern K,Itzkovitz S

    更新日期:2018-11-01 00:00:00

  • A TRP channel that senses cold stimuli and menthol.

    abstract::A distinct subset of sensory neurons are thought to directly sense changes in thermal energy through their termini in the skin. Very little is known about the molecules that mediate thermoreception by these neurons. Vanilloid Receptor 1 (VR1), a member of the TRP family of channels, is activated by noxious heat. Here ...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/s0092-8674(02)00652-9

    authors: Peier AM,Moqrich A,Hergarden AC,Reeve AJ,Andersson DA,Story GM,Earley TJ,Dragoni I,McIntyre P,Bevan S,Patapoutian A

    更新日期:2002-03-08 00:00:00

  • Cyclic-AMP-dependent protein kinase type II is associated with the Golgi complex and with centrosomes.

    abstract::The subcellular distribution of the type II enzyme of cAMP-dependent protein kinase (cAMP-dPK II) in epithelial and fibroblastic cells was determined by indirect immunofluorescence microscopy. In interphase cells both regulatory (R II) and catalytic (C) subunits were concentrated in a perinuclear area. By comparison o...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/s0092-8674(85)80084-2

    authors: Nigg EA,Schäfer G,Hilz H,Eppenberger HM

    更新日期:1985-07-01 00:00:00

  • The oncogenic cysteine-rich LIM domain protein rbtn2 is essential for erythroid development.

    abstract::The LIM domain protein rbtn2 is associated with T cell acute leukemias. We demonstrate that rbtn2 is a nuclear protein expressed in the erythroid lineage in vivo, and using homologous recombination, we show that it is essential for erythroid development in mice. The homozygous rbtn2 null mutation leads to failure of y...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(94)90571-1

    authors: Warren AJ,Colledge WH,Carlton MB,Evans MJ,Smith AJ,Rabbitts TH

    更新日期:1994-07-15 00:00:00

  • Mesenchymal to epithelial conversion in rat metanephros is induced by LIF.

    abstract::Inductive signals cause conversion of mesenchyme into epithelia during the formation of many organs. Yet a century of study has not revealed the inducing molecules. Using a standard model of induction, we found that ureteric bud cells secrete factors that convert kidney mesenchyme to epithelia that, remarkably, then f...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/s0092-8674(00)81524-x

    authors: Barasch J,Yang J,Ware CB,Taga T,Yoshida K,Erdjument-Bromage H,Tempst P,Parravicini E,Malach S,Aranoff T,Oliver JA

    更新日期:1999-11-12 00:00:00

  • Wrapping up stereocilia rootlets.

    abstract::The actin-filled stereocilia of cochlear hair cells deflect in response to sound by pivoting around rootlets at their insertion points at the sensory cell surface. Kitajiri et al. (2010) now show that the actin-binding protein TRIOBP tightly bundles the actin filaments into rootlets, endowing these stereocilia "pivots...

    journal_title:Cell

    pub_type: 评论,杂志文章

    doi:10.1016/j.cell.2010.05.022

    authors: Boutet de Monvel J,Petit C

    更新日期:2010-05-28 00:00:00

  • SGV1 encodes a CDC28/cdc2-related kinase required for a G alpha subunit-mediated adaptive response to pheromone in S. cerevisiae.

    abstract::The GPA1 gene of S. cerevisiae encodes a G alpha subunit that plays a positive role in the transduction of signals stimulating recovery from pheromone-induced cell cycle arrest. The GPA1Val50 mutation, in which Gly-50 is replaced by valine, causes hyperadaptation to pheromone. However, GPA1Val50 cells do not recover f...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(91)90386-d

    authors: Irie K,Nomoto S,Miyajima I,Matsumoto K

    更新日期:1991-05-31 00:00:00

  • Positive regulation of the cAMP-responsive activator CREM by the p70 S6 kinase: an alternative route to mitogen-induced gene expression.

    abstract::Activation of the adenylyl cyclase signaling pathway elicits the induction of genes via activators binding to cAMP-responsive elements (CREs). Nuclear factor CRE modulator (CREM) is activated by PKA-mediated phosphorylation on a serine at position 117. We show that Ser-117 is also phosphorylated by the mitogen-activat...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(94)90402-2

    authors: de Groot RP,Ballou LM,Sassone-Corsi P

    更新日期:1994-10-07 00:00:00

  • Wild-type p53 restores cell cycle control and inhibits gene amplification in cells with mutant p53 alleles.

    abstract::Loss of cell cycle control and acquisition of chromosomal rearrangements such as gene amplification often occur during tumor progression, suggesting that they may be correlated. We show here that the wild-type p53 allele is lost when fibroblasts from patients with the Li-Fraumeni syndrome (LFS) are passaged in vitro. ...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(92)90244-7

    authors: Yin Y,Tainsky MA,Bischoff FZ,Strong LC,Wahl GM

    更新日期:1992-09-18 00:00:00

  • Biochemical fractionation and assembly of the membrane components that mediate nascent chain targeting and translocation.

    abstract::Fractionation of a microsomal detergent extract with ammonium sulfate allows separation of the signal recognition particle receptor (SR alpha), which is required for targeting of the nascent chain, from other microsomal proteins, such as signal peptidase, whose activity is displayed during subsequent translocation. Th...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(91)90091-c

    authors: Nicchitta CV,Migliaccio G,Blobel G

    更新日期:1991-05-17 00:00:00

  • The origin of replication of plasmid p15A and comparative studies on the nucleotide sequences around the origin of related plasmids.

    abstract::Replication of Escherichia coli plasmid p15A was examined by use of a cell extract or a mixture of three purified E. coli enzymes: RNA polymerase; RNAase H; and DNA polymerase I. In each system, replication initiates at any of three consecutive nucleotides located at a unique site. Primer transcription starts 508 bp u...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(83)90502-0

    authors: Selzer G,Som T,Itoh T,Tomizawa J

    更新日期:1983-01-01 00:00:00

  • Structure and sequence of the cellular gene homologous to the RSV src gene and the mechanism for generating the transforming virus.

    abstract::We determined the nucleotide sequences of all coding regions and a significant part of the flanking regions of the chicken c-src gene, which is a cellular homolog of the v-src gene of Rous sarcoma virus. The c-src gene consists of 12 exons; the boundaries of the exons were determined by assuming that the amino acid se...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(83)90073-9

    authors: Takeya T,Hanafusa H

    更新日期:1983-03-01 00:00:00

  • Existence of slow-cycling limbal epithelial basal cells that can be preferentially stimulated to proliferate: implications on epithelial stem cells.

    abstract::Despite the obvious importance of epithelial stem cells in tissue homeostasis and tumorigenesis, little is known about their specific location or biological characteristics. Using 3H-thymidine labeling, we have identified a subpopulation of corneal epithelial basal cells, located in the peripheral cornea in a region c...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(89)90958-6

    authors: Cotsarelis G,Cheng SZ,Dong G,Sun TT,Lavker RM

    更新日期:1989-04-21 00:00:00

  • CPEB, maskin, and cyclin B1 mRNA at the mitotic apparatus: implications for local translational control of cell division.

    abstract::In Xenopus development, the expression of several maternal mRNAs is regulated by cytoplasmic polyadenylation. CPEB and maskin, two factors that control polyadenylation-induced translation are present on the mitotic apparatus of animal pole blastomeres in embryos. Cyclin B1 protein and mRNA, whose translation is regula...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/s0092-8674(00)00135-5

    authors: Groisman I,Huang YS,Mendez R,Cao Q,Theurkauf W,Richter JD

    更新日期:2000-10-27 00:00:00

  • An in vitro assay for Saccharomyces telomerase requires EST1.

    abstract::Telomerase activity was demonstrated in cell-free extracts from S. cerevisiae through the use of a PCR-based assay. As expected, this activity was eliminated by RNase or phenol treatment of the extract and was dependent on dGTP and dTTP. Telomerase was not detected in extracts prepared from cells grown for approximate...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/s0092-8674(05)80017-0

    authors: Lin JJ,Zakian VA

    更新日期:1995-06-30 00:00:00

  • The bacterial toxin RelE displays codon-specific cleavage of mRNAs in the ribosomal A site.

    abstract::The Escherichia coli relBE operon encodes a toxin-antitoxin pair, RelE-RelB. RelB can reverse inhibition of protein synthesis by RelE in vivo. We have found that although RelE does not degrade free RNA, it cleaves mRNA in the ribosomal A site with high codon specificity. Among stop codons UAG is cleaved with fast, UAA...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/s0092-8674(02)01248-5

    authors: Pedersen K,Zavialov AV,Pavlov MY,Elf J,Gerdes K,Ehrenberg M

    更新日期:2003-01-10 00:00:00

  • Concerted evolution of tRNA genes: intergenic conversion among three unlinked serine tRNA genes in S. pombe.

    abstract::In many cases the multiple genes coding for one specific tRNA are dispersed throughout the genome. The members of such a gene family nevertheless maintain a common nucleotide sequence during evolution. A major mechanism contributing to this concerted evolution is intergenic conversion. Here we show that it occurs betw...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(85)90347-2

    authors: Amstutz H,Munz P,Heyer WD,Leupoid U,Kohli J

    更新日期:1985-04-01 00:00:00

  • A ribonucleolytic rat torpedoes RNA polymerase II.

    abstract::Three recent papers reveal a fascinating link between pol II termination and ribonucleolytic decay of the nascent transcript by a 5'-3' exonuclease (yeast Rat1 and human Xrn2). The exonuclease travels with pol II and gains access to the nascent RNA after endonucleolytic cleavage at the poly(A) site or at a second cotr...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2004.11.041

    authors: Luo W,Bentley D

    更新日期:2004-12-29 00:00:00

  • Widespread Proteome Remodeling and Aggregation in Aging C. elegans.

    abstract::Aging has been associated with a progressive decline of proteostasis, but how this process affects proteome composition remains largely unexplored. Here, we profiled more than 5,000 proteins along the lifespan of the nematode C. elegans. We find that one-third of proteins change in abundance at least 2-fold during agi...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2015.03.032

    authors: Walther DM,Kasturi P,Zheng M,Pinkert S,Vecchi G,Ciryam P,Morimoto RI,Dobson CM,Vendruscolo M,Mann M,Hartl FU

    更新日期:2015-05-07 00:00:00

  • A "Counter-Enhancer" in Tumor Suppression.

    abstract::The role of the noncoding genome in cancer biology is continually expanding. Cho et al. reveal a new and unexpected mechanism for the regulation of MYC expression mediated by the promoter sequence of its neighbor gene PVT1. This DNA element acts as a promoter-enhancer competitor and a candidate tumor suppressor. ...

    journal_title:Cell

    pub_type: 评论,杂志文章

    doi:10.1016/j.cell.2018.05.023

    authors: Marchese FP,Huarte M

    更新日期:2018-05-31 00:00:00

  • Direct repeats flank three small nuclear RNA pseudogenes in the human genome.

    abstract::We previously demonstrated that pseudogenes complementary to the small nuclear RNAs U1, U2 and U3 are dispersed and abundant in the human genome. Here we report that three pseudogenes (U1.101, U2.13 and U3.5) are flanked by perfect short direct repeats of 16 to 19 base pairs. In all three pseudogenes. the upstream dir...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(81)90028-3

    authors: Van Arsdell SW,Denison RA,Bernstein LB,Weiner AM,Manser T,Gesteland RF

    更新日期:1981-10-01 00:00:00

  • DNAase I sensitivity and methylation of active versus inactive rRNA genes in xenopus species hybrids.

    abstract::We studied the chromatin structure and methylation of ribosomal RNA genes (rDNA) in hybrids between Xenopus laevis and Xenopus borealis. S1-nuclease protection experiments showed that 97%-98% of the rRNA precursor in hybrid tadpoles was of the X. laevis type. Preferential expression of the laevis rDNA was correlated w...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/0092-8674(82)90105-2

    authors: Macleod D,Bird A

    更新日期:1982-05-01 00:00:00

  • Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression.

    abstract::Targeted gene regulation on a genome-wide scale is a powerful strategy for interrogating, perturbing, and engineering cellular systems. Here, we develop a method for controlling gene expression based on Cas9, an RNA-guided DNA endonuclease from a type II CRISPR system. We show that a catalytically dead Cas9 lacking en...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2013.02.022

    authors: Qi LS,Larson MH,Gilbert LA,Doudna JA,Weissman JS,Arkin AP,Lim WA

    更新日期:2013-02-28 00:00:00

  • Selective Chemical Inhibition of PGC-1α Gluconeogenic Activity Ameliorates Type 2 Diabetes.

    abstract::Type 2 diabetes (T2D) is a worldwide epidemic with a medical need for additional targeted therapies. Suppression of hepatic glucose production (HGP) effectively ameliorates diabetes and can be exploited for its treatment. We hypothesized that targeting PGC-1α acetylation in the liver, a chemical modification known to ...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2017.03.001

    authors: Sharabi K,Lin H,Tavares CDJ,Dominy JE,Camporez JP,Perry RJ,Schilling R,Rines AK,Lee J,Hickey M,Bennion M,Palmer M,Nag PP,Bittker JA,Perez J,Jedrychowski MP,Ozcan U,Gygi SP,Kamenecka TM,Shulman GI,Schreiber SL,Gr

    更新日期:2017-03-23 00:00:00

  • Neuron-Astrocyte Metabolic Coupling Protects against Activity-Induced Fatty Acid Toxicity.

    abstract::Metabolic coordination between neurons and astrocytes is critical for the health of the brain. However, neuron-astrocyte coupling of lipid metabolism, particularly in response to neural activity, remains largely uncharacterized. Here, we demonstrate that toxic fatty acids (FAs) produced in hyperactive neurons are tran...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2019.04.001

    authors: Ioannou MS,Jackson J,Sheu SH,Chang CL,Weigel AV,Liu H,Pasolli HA,Xu CS,Pang S,Matthies D,Hess HF,Lippincott-Schwartz J,Liu Z

    更新日期:2019-05-30 00:00:00

  • Smac mimetics and TNFalpha: a dangerous liaison?

    abstract::Inhibitor of apoptosis proteins (IAPs) such as XIAP, cIAP1, and cIAP2 are upregulated in many cancer cells. It has been thought that small-molecule mimetics of Smac, an endogenous IAP antagonist, might potentiate apoptosis in cancer cells by promoting caspase activation. However, three recent papers, two in Cell (Vinc...

    journal_title:Cell

    pub_type: 评论,杂志文章,评审

    doi:10.1016/j.cell.2007.10.042

    authors: Wu H,Tschopp J,Lin SC

    更新日期:2007-11-16 00:00:00

  • The retromer protein VPS29 links cell polarity and organ initiation in plants.

    abstract::A key feature of plants (as opposed to animals) is their ability to establish new organs not only during embryogenesis, but also throughout their development. A master regulator of organ initiation in plants is the phytohormone auxin. Auxin acts locally as a morphogen and is directionally transported from cell to cell...

    journal_title:Cell

    pub_type: 杂志文章

    doi:10.1016/j.cell.2007.08.040

    authors: Jaillais Y,Santambrogio M,Rozier F,Fobis-Loisy I,Miège C,Gaude T

    更新日期:2007-09-21 00:00:00

  • Lineage tracing.

    abstract::Lineage tracing is the identification of all progeny of a single cell. Although its origins date back to developmental biology of invertebrates in the 19(th) century, lineage tracing is now an essential tool for studying stem cell properties in adult mammalian tissues. Lineage tracing provides a powerful means of unde...

    journal_title:Cell

    pub_type: 历史文章,杂志文章

    doi:10.1016/j.cell.2012.01.002

    authors: Kretzschmar K,Watt FM

    更新日期:2012-01-20 00:00:00

  • Epigenetics drives RAGs to recombination riches.

    abstract::V(D)J recombination of antigen receptor gene segments in B and T cells is mediated by the lymphoid-specific proteins RAG1 and RAG2. Now, Ji et al. (2010) demonstrate how RAG1 and RAG2 use DNA sequence specificity and modified histones within chromatin to target specific loci for V(D)J recombination at different stages...

    journal_title:Cell

    pub_type: 评论,杂志文章

    doi:10.1016/j.cell.2010.04.014

    authors: Schlissel MS

    更新日期:2010-04-30 00:00:00