Abstract:
:We present a theoretical study of excitation dynamics in the chlorosome antenna complex of green photosynthetic bacteria based on a recently proposed model for the molecular assembly. Our model for the excitation energy transfer (EET) throughout the antenna combines a stochastic time propagation of the excitonic wave function with molecular dynamics simulations of the supramolecular structure and electronic structure calculations of the excited states. We characterized the optical properties of the chlorosome with absorption, circular dichroism and fluorescence polarization anisotropy decay spectra. The simulation results for the excitation dynamics reveal a detailed picture of the EET in the chlorosome. Coherent energy transfer is significant only for the first 50 fs after the initial excitation, and the wavelike motion of the exciton is completely damped at 100 fs. Characteristic time constants of incoherent energy transfer, subsequently, vary from 1 ps to several tens of ps. We assign the time scales of the EET to specific physical processes by comparing our results with the data obtained from time-resolved spectroscopy experiments.
journal_name
Photosynth Resjournal_title
Photosynthesis researchauthors
Fujita T,Huh J,Saikin SK,Brookes JC,Aspuru-Guzik Adoi
10.1007/s11120-014-9978-7subject
Has Abstractpub_date
2014-06-01 00:00:00pages
273-89issue
3eissn
0166-8595issn
1573-5079journal_volume
120pub_type
杂志文章abstract::Thylakoids are complex sub-organellar membrane systems whose role in photosynthesis makes them critical to life. Thylakoids require the coordinated expression of both nuclear- and plastid-encoded proteins to allow rapid response to changing environmental conditions. Transport of cytoplasmically synthesized proteins to...
journal_title:Photosynthesis research
pub_type: 杂志文章,评审
doi:10.1007/s11120-018-0567-z
更新日期:2018-12-01 00:00:00
abstract::This review presents a summary of recent investigations examining the structure and function of the chlorophyll-proteins CPa-1 (CP47) and CPa-2 (CP43). Comparisons of the derived amino acid sequences of these proteins suggest sites for chlorophyll binding and for interactions between these chlorophyll-proteins and oth...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/BF00032639
更新日期:1990-04-01 00:00:00
abstract::Energy storage measurements by modulated photothermal radiometry (PTR) were carried out on intact leaves to assess the value of the PTR method for photosynthesis research. In particular, correlations to the redox state of P700 under various conditions were examined. PTR monitors modulated light conversion to heat by s...
journal_title:Photosynthesis research
pub_type: 杂志文章
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更新日期:1991-08-01 00:00:00
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journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/BF00027142
更新日期:1994-01-01 00:00:00
abstract::To investigate the impact of iron deficiency on bioenergetic pathways in Chlamydomonas, we compared growth rates, iron content, and photosynthetic parameters systematically in acetate versus CO(2)-grown cells. Acetate-grown cells have, predictably (2-fold) greater abundance of respiration components but also, counter-...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-010-9562-8
更新日期:2010-07-01 00:00:00
abstract::Roderick K. Clayton passed away on October 23, 2011, at the age of 89, shortly after the plan for this dedicatory issue of Photosynthesis Research had been hatched. I had just written a lengthy letter to him to re-establish contact after a hiatus of 2 or 3 years, and to suggest that I visit him to talk about his life....
journal_title:Photosynthesis research
pub_type: 传,历史文章,杂志文章
doi:10.1007/s11120-013-9948-5
更新日期:2014-05-01 00:00:00
abstract::The coupling factor CF1 is a catalytic part of chloroplast ATP synthase which is exposed to stroma whose viscosity is many-fold higher than that of reaction mixtures commonly used to measure kinetics of CF1-catalyzed ATP hydrolysis. This study is focused on the effect of medium viscosity modulated by sucrose or bovine...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-015-0213-y
更新日期:2016-05-01 00:00:00
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journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-012-9777-y
更新日期:2012-10-01 00:00:00
abstract::Fourier transform infrared (FTIR) spectroscopy probes the vibrational properties of amino acids and cofactors, which are sensitive to minute structural changes. The lack of specificity of this technique, on the one hand, permits us to probe directly the vibrational properties of almost all the cofactors, amino acid si...
journal_title:Photosynthesis research
pub_type: 杂志文章,评审
doi:10.1007/s11120-009-9439-x
更新日期:2009-08-01 00:00:00
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journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-016-0246-x
更新日期:2016-06-01 00:00:00
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journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/BF00035259
更新日期:1988-02-01 00:00:00
abstract::The cyanobacterial small CAB-like proteins (SCPs) are one-helix proteins with compelling similarity to the first and third transmembrane helix of proteins belonging to the CAB family of light-harvesting complex proteins in plants. The SCP proteins are transiently expressed at high light intensity and other stress cond...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-007-9244-3
更新日期:2008-02-01 00:00:00
abstract::A three-dimensional model of the core proteins D1 and D2, including the cofactors, that form the Photosystem II reaction centre of pea (Pisum sativum), has been generated. This model was built with a rule-based computer modelling system using the information from the crystal structures of the photosynthetic reaction c...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/BF00033446
更新日期:1992-11-01 00:00:00
abstract::A chlorosome is an antenna complex located on the cytoplasmic side of the inner membrane in green photosynthetic bacteria that contains tens of thousands of self-assembled bacteriochlorophylls (BChls). Green bacteria are known to incorporate various esterifying alcohols at the C-17 propionate position of BChls in the ...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-014-0017-5
更新日期:2014-10-01 00:00:00
abstract::The quenching of variable fluorescence yield (qN) and the quenching of dark level fluorescence yield (q0) directly atributable to high-energy-state fluorescence quenching (qE) was studied to distinguish between energy dissipation in the antenna and light harvesting complexes (antenna quenching) and energy dissipation ...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/BF00033161
更新日期:1990-09-01 00:00:00
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journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/BF00019041
更新日期:1994-04-01 00:00:00
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journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-009-9405-7
更新日期:2009-03-01 00:00:00
abstract::The quantum yield for light-induced H2 generation was measured for a previously optimized bio-hybrid cytochrome c 6-crosslinked PSI(C13G)-1,8-octanedithiol-[FeFe]-H2ase(C97G) (PSI-H2ase) nanoconstruct. The theoretical quantum yield for the PSI-H2ase nanoconstruct is 0.50 molecules of H2 per photon absorbed, which equa...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-014-0064-y
更新日期:2016-01-01 00:00:00
abstract::The effects of Fe resupply to Fe-deficient plants have been investigated in hydroponically-grown sugar beet. In the short-term (24 h) after Fe resupply, major changes were observed, although de novo chlorophyll (Chl) synthesis had not begun yet. Approximately 50% of the zeaxanthin was converted into violaxanthin, wher...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1023/B:PRES.0000011919.35309.5e
更新日期:2004-01-01 00:00:00
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journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-018-0575-z
更新日期:2019-03-01 00:00:00
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journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/BF00032597
更新日期:1990-05-01 00:00:00
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journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/BF00055064
更新日期:1987-01-01 00:00:00
abstract::In the leaf succulent Asclepiad Hoya carnosa (L.) R. Br., CAM photosynthesis occurred under well-watered conditions, as characterized by diurnal gas exchange and changes in titratable acidity. Following 10-12 days of severe water stress, the plants shifted from CAM to a modified CAM-idling mode of metabolism. CAM-idli...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/BF00052124
更新日期:1983-09-01 00:00:00
abstract::While interest in photosynthetic thermal acclimation has been stimulated by climate warming, comparing results across studies requires consistent terminology. We identify five types of photosynthetic adjustments in warming experiments: photosynthesis as measured at the high growth temperature, the growth temperature, ...
journal_title:Photosynthesis research
pub_type: 杂志文章,评审
doi:10.1007/s11120-013-9873-7
更新日期:2014-02-01 00:00:00
abstract::After a brief prologue on Otto Kandler's life, we describe briefly his pioneering work on photosynthesis (photophosphorylation and the carbon cycle) and his key participation in the discovery of the concept of three forms of life (Archaea, Prokarya, and Eukarya). With Otto Kandler's passing, both the international pho...
journal_title:Photosynthesis research
pub_type: 传,历史文章,杂志文章
doi:10.1007/s11120-018-0530-z
更新日期:2018-09-01 00:00:00
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journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-013-9964-5
更新日期:2014-03-01 00:00:00
abstract::The filamentous nitrogen-fixing cyanobacterium, Anabaena sp. strain PCC 7120 was found to tolerate very high doses of 60Co-gamma radiation or prolonged desiccation. Post-stress, cells remained intact and revived all the vital functions. A remarkable capacity to repair highly disintegrated genome and recycle the damage...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-013-9936-9
更新日期:2013-10-12 00:00:00
abstract::Here, we describe a new imaging setup able to assess in vivo photosynthetic activity. The system specifically measures time-resolved chlorophyll fluorescence in response to light. It is composed of a fast digital camera equipped with a wide-angle lens for the analysis of samples up to 10 x 10 cm, i.e. entire plants or...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/s11120-009-9487-2
更新日期:2009-10-01 00:00:00
abstract::Light activation of phosphoenolpyruvate carboxylase from the leaves of the C4 plant Setaria verticillata (L.) is more pronounced at low CO2 levels. The 2-fold activation observed at physiological ambient CO2 becomes 3.64-fold at 5 μL/L and completely abolished above 700 μL/L. When the stomata close under the influence...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/BF00034834
更新日期:1988-11-01 00:00:00
abstract::A spontaneous mutant (R/89) of photosynthetic purple bacterium Rhodobacter sphaeroides R-26 was selected for resistance to 200 μM atrazin. It showed increased resistance to interquinone electron transfer inhibitors of o-phenanthroline (resistance factor, RF=20) in UQo reconstituted isolated reaction centers and terbut...
journal_title:Photosynthesis research
pub_type: 杂志文章
doi:10.1007/BF00032585
更新日期:1995-08-01 00:00:00