D-enantiomers take a close look at the functioning of a cardiac cationic L-amino acid transporter.

Abstract:

:Cationic amino acid transporters are highly selective for L-enantiomers such as L-arginine (L-Arg). Because of this stereoselectivity, little is known about the interaction of these transporters with D-isomers. To study whether these compounds can provide information on the molecular mechanism of transport, inward currents activated by L-Arg with low apparent affinity were measured in whole-cell voltage-clamped cardiomyocytes as a function of extracellular L-Arg and D-Arg concentrations. D-Arg inhibited L-Arg currents in a membrane-potential (V(M))-dependent competitive manner, indicating the presence of D-Arg binding sites in the carrier. Analysis of these steady-state currents showed that L- and D-Arg binding reactions dissipate a similar small fraction of the membrane electric field. Since D-Arg is not transported, these results suggest that enantiomer recognition occurs at conformational transitions that initiate amino acid translocation. The V(M) dependence of maximal current levels suggests that inward currents arise from the slow outward movement of negative charges in the unliganded transporter. Translocation of the L-Arg-bound complex, on the other hand, appears to be electroneutral. D-Arg-dependent transient charge movements, also detected in these cells, displayed a V(M)-dependent charge distribution and kinetics that are consistent with amino acid binding in an ion well in a shallow, water-filled extracellular binding pocket.

journal_name

Biophys J

journal_title

Biophysical journal

authors

Zhou J,Peluffo RD

doi

10.1016/j.bpj.2010.09.025

subject

Has Abstract

pub_date

2010-11-17 00:00:00

pages

3224-33

issue

10

eissn

0006-3495

issn

1542-0086

pii

S0006-3495(10)01172-0

journal_volume

99

pub_type

杂志文章
  • A semiquantitative theory of synaptic vesicle movements.

    abstract::Under the assumption that vesicles are the anatomic correlate of quantal release, the forces governing the movement of synaptic vesicles inside neurons are analyzed. Semiquantitative calculations are presented to show that a diffuse layer field penetrates a few Debye lengths into the axoplasm. This field binds tightly...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(73)85973-9

    authors: Remler MP

    更新日期:1973-02-01 00:00:00

  • Cooperativity of thiol-modified myosin filaments. ATPase and motility assays of myosin function.

    abstract::The effects of chemical modifications of myosin's reactive cysteines on actomyosin adenosine triphosphatase (ATPase) activities and sliding velocities in the in vitro motility assays were examined in this work. The three types of modifications studied were 4-[N-[(iodoacetoxy)ethyl]-N-methylamino]-7-nitrobenz-2-oxa-1,3...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(92)81646-6

    authors: Root DD,Reisler E

    更新日期:1992-09-01 00:00:00

  • Catalysis-enhancement via rotary fluctuation of F1-ATPase.

    abstract::Protein conformational fluctuations modulate the catalytic powers of enzymes. The frequency of conformational fluctuations may modulate the catalytic rate at individual reaction steps. In this study, we modulated the rotary fluctuation frequency of F1-ATPase (F1) by attaching probes with different viscous drag coeffic...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2013.09.050

    authors: Watanabe R,Hayashi K,Ueno H,Noji H

    更新日期:2013-11-19 00:00:00

  • Binding constants of Li+, K+, and Tl+ in the gramicidin channel determined from water permeability measurements.

    abstract::In an open circuit there can be no net cation flux through membranes containing only cation-selective channels, because electroneutrality must be maintained. If the channels are so narrow that water and cations cannot pass by each other, then the net water flux through those "single-file" channels that contain a catio...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(81)84804-7

    authors: Dani JA,Levitt DG

    更新日期:1981-08-01 00:00:00

  • Simultaneous capacitance and amperometric measurements of exocytosis: a comparison.

    abstract::We measured the exocytotic response induced by flash photolysis of caged compounds in isolated mast cells and chromaffin cells. Vesicle fusion was measured by monitoring the cell membrane capacitance. The release of vesicular contents was followed by amperometry. In response to a GTP gamma S stimulus we found that the...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(96)79315-3

    authors: Oberhauser AF,Robinson IM,Fernandez JM

    更新日期:1996-08-01 00:00:00

  • Monomer diffusion into polymer domains in sickle hemoglobin.

    abstract::The gelation of sickle hemoglobin includes the formation of spherulitic arrays of polymers, known as polymer domains, which are an intrinsic result of the polymer formation mechanism. We have observed the diffusion of monomers into domains as they form, which substantially increases the total concentration of hemoglob...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(90)82449-8

    authors: Cho MR,Ferrone FA

    更新日期:1990-10-01 00:00:00

  • Rate constant of muscle force redevelopment reflects cooperative activation as well as cross-bridge kinetics.

    abstract::The rate of muscle force redevelopment after release-restretch protocols has previously been interpreted using a simple two-state cross-bridge cycling model with rate constants for transitions between non-force-bearing and force-bearing states, f, and between force-bearing and non-force-bearing states, g. Changes in t...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(97)78664-8

    authors: Campbell K

    更新日期:1997-01-01 00:00:00

  • Electrostatic free energy of lysozyme.

    abstract::The electrostatic free energies of native and acetylated lysozymes were computed by the fixed charge model (Tanford, C., and J. G. Kirkwood, 1957, J. Am. Chem. Soc., 79:5333-5339). For each computation, the charges were transformed into a sphere of fixed radius without changing their depths or the distance between cha...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(83)84302-1

    authors: Imoto T

    更新日期:1983-12-01 00:00:00

  • Initial conformational changes of human transthyretin under partially denaturing conditions.

    abstract::Human transthyretin (TTR) is an amyloidogenic protein. The pathway of TTR amyloid formation has been proposed based on lines of evidence: TTR tetramer first dissociates into native monomers, which is shown to be a rate-limiting step in the formation of fibrils. Subsequently, the monomeric species partially unfold to f...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.105.059642

    authors: Yang M,Lei M,Bruschweiler R,Huo S

    更新日期:2005-07-01 00:00:00

  • Surface specific kinetics of lipid vesicle adsorption measured with a quartz crystal microbalance.

    abstract::We have measured the kinetics of adsorption of small (12.5-nm radius) unilamellar vesicles onto SiO2, oxidized gold, and a self-assembled monolayer of methyl-terminated thiols, using a quartz crystal microbalance (QCM). Simultaneous measurements of the shift in resonant frequency and the change in energy dissipation a...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(98)74057-3

    authors: Keller CA,Kasemo B

    更新日期:1998-09-01 00:00:00

  • Calorimetry outside the box: a new window into the plasma proteome.

    abstract::Differential scanning calorimetry provides a new window into the plasma proteome. Plasma from normal individuals yields a characteristic, reproducible thermogram that appears to represent the weighted sum of denaturation profiles of the most abundant constituent plasma proteins. Plasma from diseased individuals yields...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.107.119453

    authors: Garbett NC,Miller JJ,Jenson AB,Chaires JB

    更新日期:2008-02-15 00:00:00

  • Bending resistance and chemically induced moments in membrane bilayers.

    abstract::Pure bending of a membrane bilayer is developed including different properties for each membrane half. Both connected and unconnected bilayer surfaces are treated. The bilayer bending resistance is the resultant of parallel surface compression "resistances." The neutral surface is a function of the upper and lower sur...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(74)85959-X

    authors: Evans EA

    更新日期:1974-12-01 00:00:00

  • 1H-NMR study of the three low temperature phases of DPPC-water systems.

    abstract::The three phases of dipalmitoylphosphatidylcholine-water dispersions, occurring below the main transition are studied by a moment analysis of 1H-nuclear magnetic resonance (NMR) spectra. The subtransition, recently detected by Chen, S. C., J. M. Sturtevant, and B. J. Gaffney, 1980, Pro. Natl. Acad. Sci. USA, 77:5060-5...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(83)84396-3

    authors: Trahms L,Klabe WD,Boroske E

    更新日期:1983-06-01 00:00:00

  • Secondary structure and lipid contact of a peptide antibiotic in phospholipid bilayers by REDOR.

    abstract::The chemical shifts of specific (13)C and (15)N labels distributed throughout KIAGKIA-KIAGKIA-KIAGKIA (K3), an amphiphilic 21-residue antimicrobial peptide, prove that the peptide is in an all alpha-helical conformation in the bilayers of multilamellar vesicles (MLVs) containing dipalmitoylphosphatidylcholine and dipa...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.103.032706

    authors: Toke O,Maloy WL,Kim SJ,Blazyk J,Schaefer J

    更新日期:2004-07-01 00:00:00

  • Induction of endogenous channels by high levels of heterologous membrane proteins in Xenopus oocytes.

    abstract::Xenopus oocytes are widely employed for heterologous expression of cloned proteins, particularly electrogenic molecules such as ion channels and transporters. The high levels of expression readily obtained permit detailed investigations without interference from endogenous conductances. Injection of min K mRNA into Xe...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(95)79964-7

    authors: Tzounopoulos T,Maylie J,Adelman JP

    更新日期:1995-09-01 00:00:00

  • Dynamic imaging of lateral diffusion by electron spin resonance and study of rotational dynamics in model membranes. Effect of cholesterol.

    abstract::The effects of cholesterol on the dynamics and the structural properties of two different spin probes, the sterol type CSL and the phospholipid type 16-PC, in POPC/cholesterol oriented multilayer model membranes were examined. Our results are consistent with a nonideal solution containing cholesterol-rich clusters cre...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(89)82847-4

    authors: Shin YK,Freed JH

    更新日期:1989-03-01 00:00:00

  • Triphasic force dependence of E-selectin/ligand dissociation governs cell rolling under flow.

    abstract::During inflammation, flowing leukocytes tether to and roll on vascular surfaces through the association and dissociation of selectin/ligand bonds. The interactions of P- and L- selectins with their respective ligands exhibit catch-slip bonds, such that increasing force initially prolongs and then shortens bond lifetim...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2010.05.040

    authors: Wayman AM,Chen W,McEver RP,Zhu C

    更新日期:2010-08-09 00:00:00

  • Nonequilibrium steady-state differences in partial pressure of CO 2 and in concentration of weak acids and bases between blood and tissue.

    abstract::Several investigators have demonstrated that under conditions where little or no gas exchange occurs across the alveolar capillary membrane the PCO(2) is higher in the alveolus than in the mixed venous blood, whereas there are no PO(2) differences. Gurtner et al. have explained the DeltaPCO(2) by a model in which H(+)...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(72)86106-X

    authors: Gurtner GH

    更新日期:1972-06-01 00:00:00

  • The conserved phenylalanine in the K+ channel voltage-sensor domain creates a barrier with unidirectional effects.

    abstract::Voltage-gated ion channels are crucial for regulation of electric activity of excitable tissues such as nerve cells, and play important roles in many diseases. During activation, the charged S4 segment in the voltage sensor domain translates across a hydrophobic core forming a barrier for the gating charges. This barr...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2012.11.3827

    authors: Schwaiger CS,Liin SI,Elinder F,Lindahl E

    更新日期:2013-01-08 00:00:00

  • Analytic binding isotherms describing competitive interactions of a protein ligand with specific and nonspecific sites on the same DNA oligomer.

    abstract::Many studies of specific protein-nucleic acid binding use short oligonucleotides or restriction fragments, in part to minimize the potential for nonspecific binding of the protein. However, when the specificity ratio is low, multiple nonspecifically bound proteins may occupy the region of DNA corresponding to one spec...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(01)75847-X

    authors: Tsodikov OV,Holbrook JA,Shkel IA,Record MT Jr

    更新日期:2001-10-01 00:00:00

  • Structural rigidity of paranemic crossover and juxtapose DNA nanostructures.

    abstract::Crossover motifs are integral components for designing DNA-based nanostructures and nanomechanical devices due to their enhanced rigidity compared to the normal B-DNA. Although the structural rigidity of the double helix B-DNA has been investigated extensively using both experimental and theoretical tools, to date the...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2011.08.007

    authors: Santosh M,Maiti PK

    更新日期:2011-09-21 00:00:00

  • Modulation of titin-based stiffness by disulfide bonding in the cardiac titin N2-B unique sequence.

    abstract::The giant protein titin is responsible for the elasticity of nonactivated muscle sarcomeres. Titin-based passive stiffness in myocardium is modulated by titin-isoform switching and protein-kinase (PK)A- or PKG-dependent titin phosphorylation. Additional modulatory effects on titin stiffness may arise from disulfide bo...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2009.05.037

    authors: Grützner A,Garcia-Manyes S,Kötter S,Badilla CL,Fernandez JM,Linke WA

    更新日期:2009-08-05 00:00:00

  • Vibrational frequency shifts and relaxation rates for a selected vibrational mode in cytochrome C.

    abstract::The vibrational energy relaxation of a selected vibrational mode in cytochrome c--a C-D stretch in the terminal methyl group of Met80--has been studied using equilibrium molecular dynamics simulation and normal mode analysis methods. As demonstrated in the pioneering work of Romesberg and co-workers, isotopic labeling...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(03)74575-5

    authors: Bu L,Straub JE

    更新日期:2003-09-01 00:00:00

  • Investigation of N-Terminal Phospho-Regulation of Uracil DNA Glycosylase Using Protein Semisynthesis.

    abstract::Uracil DNA Glycosylase (UNG2) is the primary enzyme in humans that prevents the stable incorporation of deoxyuridine monophosphate into DNA in the form of U/A basepairs. During S-phase, UNG2 remains associated with the replication fork through its interactions with two proteins, Proliferating Cell Nuclear Antigen (PCN...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2017.06.016

    authors: Weiser BP,Stivers JT,Cole PA

    更新日期:2017-07-25 00:00:00

  • Conformation of reconstituted mononucleosomes and effect of linker histone H1 binding studied by scanning force microscopy.

    abstract::The conformation of mononucleosome complexes reconstituted with recombinant core histones on a 614-basepair-long DNA fragment containing the Xenopus borealis 5S rRNA nucleosome positioning sequence was studied by scanning/atomic force microscopy in the absence or presence of linker histone H1. Imaging without prior fi...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(03)74815-2

    authors: Kepert JF,Tóth KF,Caudron M,Mücke N,Langowski J,Rippe K

    更新日期:2003-12-01 00:00:00

  • The effect of thin filament activation on the attachment of weak binding cross-bridges: A two-dimensional x-ray diffraction study on single muscle fibers.

    abstract::To study possible structural changes in weak cross-bridge attachment to actin upon activation of the thin filament, two-dimensional (2D) x-ray diffraction patterns of skinned fibers from rabbit psoas muscle were recorded at low and high calcium concentration in the presence of saturating concentrations of MgATPgammaS,...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(99)77309-1

    authors: Kraft T,Xu S,Brenner B,Yu LC

    更新日期:1999-03-01 00:00:00

  • Coarse-grained simulation studies of peptide-induced pore formation.

    abstract::We investigate the interactions between lipid bilayers and amphiphilic peptides using a solvent-free coarse-grained simulation technique. In our model, each lipid is represented by one hydrophilic and three hydrophobic beads. The amphiphilic peptide is modeled as a hydrophobic-hydrophilic cylinder with hydrophilic cap...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1529/biophysj.108.131300

    authors: Illya G,Deserno M

    更新日期:2008-11-01 00:00:00

  • Changes in quantum yield of photosynthesis in the red alga Porphyridium cruentum caused by stepwise reduction in the intensity of light preferentially absorbed by the phycobilins.

    abstract::This paper describes the relation between the quantum yield of photosynthesis in the red alga Porphyridium cruentum, and the spectral composition of light, changed by filtering white light through aqueous phycobilin solutions of increasing optical density. At sufficiently high densities of the filter solution, no meas...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/s0006-3495(60)86876-2

    authors: THOMAS JB,GOVINDJEE

    更新日期:1960-09-01 00:00:00

  • High resolution structures of the 4-4-20 Fab-fluorescein complex in two solvent systems: effects of solvent on structure and antigen-binding affinity.

    abstract::Three-dimensional structures were determined for three crystal forms of the antigen binding fragment (Fab) of anti-fluorescein antibody 4-4-20 in complex with fluorescein. These included 1) a triclinic (P1) form crystallized in 47% (v/v) 2-methyl-2,4-pentanediol (MPD); 2) a triclinic (P1) form crystallized in 16% (w/v...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/S0006-3495(94)80738-6

    authors: Herron JN,Terry AH,Johnston S,He XM,Guddat LW,Voss EW Jr,Edmundson AB

    更新日期:1994-12-01 00:00:00

  • Myofilament length-dependent activation develops within 5 ms in guinea-pig myocardium.

    abstract::Myofilament length-dependent activation is a universal property of striated muscle, yet the molecular mechanisms that underlie this phenomenon are incompletely understood. Additionally, the rate by which sarcomere length (SL) is sensed and then transduced to form length-dependent activation is unknown. Here, using iso...

    journal_title:Biophysical journal

    pub_type: 杂志文章

    doi:10.1016/j.bpj.2012.05.034

    authors: Mateja RD,de Tombe PP

    更新日期:2012-07-03 00:00:00