Abstract：
:The extensive mechanistic and regulatory interconnections between the various events of mRNA biogenesis are now recognized as a fundamental principle of eukaryotic gene expression, yet the specific details of the coupling between the various steps of mRNA biogenesis do differ, and sometimes dramatically, between the different kingdoms. In this review, we emphasize examples where plants must differ in this respect from other eukaryotes, and highlight a recurring trend of recruiting the conserved, versatile functional modules, which have evolved to support the general mRNA biogenesis reactions, for plant-specific functions. We also argue that elucidating the inner workings of the plant 'mRNA factory' is essential for accomplishing the ambitious goal of building the 'virtual plant'.
journal_name
Trends Plant Scijournal_title
Trends in plant scienceauthors
Belostotsky DA,Rose ABdoi
10.1016/j.tplants.2005.05.004subject
Has Abstractpub_date
2005-07-01 00:00:00pages
347-53issue
7eissn
1360-1385issn
1878-4372pii
S1360-1385(05)00122-6journal_volume
10pub_type
杂志文章,评审abstract：:Two recent reports by Maekawa et al. and Narusaka et al. demonstrated the transfer of a nucleotide-binding domain and leucine-rich repeat (NLR) family of immune receptors into evolutionarily diverged plants without causing adverse fitness consequences. The applications of NLRs in engineering durable and broad-spectrum...
journal_title：Trends in plant science
pub_type： 杂志文章
doi：10.1016/j.tplants.2013.08.005
更新日期：2013-09-01 00:00:00
abstract：:Signal transduction and enzyme regulation are known to occur via phosphorylation, but it is becoming increasingly apparent that phosphorylation might be only a necessary preamble to regulation. In many cases, the phosphorylated target protein must associate with a specialized adapter protein, known as 14-3-3, to compl...
journal_title：Trends in plant science
pub_type： 杂志文章
doi：10.1016/s1360-1385(99)01462-4
更新日期：1999-09-01 00:00:00
abstract：:Mutator (Mu) element insertion has become the main way of mutating and cloning maize genes, but we are only beginning to understand how this transposon system is regulated. Mu elements are under tight developmental control and are subject to a form of epigenetic regulation that shares some features with the regulation...
journal_title：Trends in plant science
pub_type： 杂志文章,评审
doi：10.1016/s1360-1385(02)02347-6
更新日期：2002-11-01 00:00:00
abstract：:In spite of the large yield losses that weeds inflict on crops, we know little about the genomics of economically important weed species. Comparative genomics between plant model species and weeds, map-based approaches, genomic sequencing and functional genomics can play vital roles in understanding and dissecting wee...
journal_title：Trends in plant science
pub_type： 杂志文章,评审
doi：10.1016/j.tplants.2004.06.003
更新日期：2004-08-01 00:00:00
abstract：:Innate immunity in plants and animals shares many structural and functional homologies, which suggests an ancient origin of cellular defense mechanisms in both kingdoms. Pathogen sensing in animal innate immunity is mediated by Toll-like receptors (TLRs). These receptors have TIR (Toll/interleukin-1 receptor) domains ...
journal_title：Trends in plant science
pub_type： 杂志文章
doi：10.1016/s1360-1385(02)02311-7
更新日期：2002-09-01 00:00:00
abstract：:To exploit plants as living substrates, biotrophic fungi have evolved remarkable variations of their tubular cells, the hyphae. They form infection structures such as appressoria, penetration hyphae and infection hyphae to invade the plant with minimal damage to host cells. To establish compatibility with the host, co...
journal_title：Trends in plant science
pub_type： 杂志文章,评审
doi：10.1016/s1360-1385(02)02297-5
更新日期：2002-08-01 00:00:00
abstract：:Sugars and nitrate play a major role in providing carbon and nitrogen in plants. Understanding how plants sense these nutrients is crucial, most notably for crop improvement. The mechanisms underlying sugar and nitrate sensing are complex and involve moonlighting proteins such as the nitrate transporter NRT1.1/NFP6.3 ...
journal_title：Trends in plant science
pub_type： 杂志文章,评审
doi：10.1016/j.tplants.2020.11.006
更新日期：2020-12-03 00:00:00
abstract：:The plant-specific LBD (Lateral Organ Boundaries Domain) gene family is essential in the regulation of plant lateral organ development and is involved in the regulation of anthocyanin and nitrogen metabolism. LBD proteins contain a characteristic LOB domain composed of a C-motif required for DNA-binding, a conserved g...
journal_title：Trends in plant science
pub_type： 杂志文章,评审
doi：10.1016/j.tplants.2010.09.009
更新日期：2011-01-01 00:00:00
abstract：:Some pri-miRNAs can code for short peptides called micropeptides (miPEPs) and it has been suggested that these peptides positively regulate the accumulation of their associated miRNAs. Recent data further support this model and point towards the potential for miPEPs to be used in the agricultural sector to improve cro...
journal_title：Trends in plant science
pub_type： 杂志文章
doi：10.1016/j.tplants.2020.12.004
更新日期：2020-12-19 00:00:00
abstract：:In both plants and animals, defense against pathogens relies on a complex surveillance system for signs of danger. Danger signals may originate from the infectious agent or from the host itself. Immunogenic plant host factors can be roughly divided into two categories: molecules which are passively released upon cell ...
journal_title：Trends in plant science
pub_type： 杂志文章,评审
doi：10.1016/j.tplants.2017.07.005
更新日期：2017-09-01 00:00:00
abstract：:PHYTOCHROME-INTERACTING FACTOR 3 (PIF3) is a basic helix-loop-helix transcription factor with critical roles in light signaling. Recent work identified PIF3 as a negative regulator of arabidopsis (Arabidopsis thaliana) freezing tolerance. ...
journal_title：Trends in plant science
pub_type： 评论,杂志文章
doi：10.1016/j.tplants.2017.12.003
更新日期：2018-02-01 00:00:00
abstract：:Green algae are the only known eukaryotes with both oxygenic photosynthesis and a hydrogen metabolism. Recent physiological and genetic discoveries indicate a close connection between these metabolic pathways. The anaerobically inducible hydA genes of algae encode a special type of highly active [Fe]-hydrogenase. Elec...
journal_title：Trends in plant science
pub_type： 杂志文章
doi：10.1016/s1360-1385(02)02274-4
更新日期：2002-06-01 00:00:00
abstract：:Acetyl-coenzyme A (CoA) is a central metabolite involved in numerous anabolic and catabolic pathways, as well as in protein acetylation. Beyond histones, a large number of metabolic enzymes are acetylated in both animal and bacteria, and the protein acetylome is now emerging in plants. Protein acetylation is influence...
journal_title：Trends in plant science
pub_type： 杂志文章,评审
doi：10.1016/j.tplants.2012.03.008
更新日期：2012-07-01 00:00:00
abstract：:The architecture of inflorescences diverged during the evolution of distinct plant families by mechanisms that remain unknown. Using computer modeling, Przemyslaw Prusinkiewicz and colleagues established a single model for the development of distinct inflorescences. Selection restricts inflorescence evolution to high ...
journal_title：Trends in plant science
pub_type： 杂志文章,评审
doi：10.1016/j.tplants.2007.11.004
更新日期：2008-01-01 00:00:00
abstract：:Reactive oxygen species (ROS)- and calcium- dependent signaling pathways play well-established roles during plant innate immunity. Chloroplasts host major biosynthetic pathways and have central roles in energy production, redox homeostasis, and retrograde signaling. However, the organelle's importance in immunity has ...
journal_title：Trends in plant science
pub_type： 杂志文章
doi：10.1016/j.tplants.2014.10.002
更新日期：2015-01-01 00:00:00
abstract：:The isolation of over 30 plant disease-resistance genes revealed that most genes encode putatively cytoplasmic proteins with a nucleotide-binding site (NBS) and a leucine-rich repeat (LRR). However, the recent isolation of the Arabidopsis RRS1-R gene has uncovered a novel NBS-LRR subtype that harbors a C-terminal exte...
journal_title：Trends in plant science
pub_type： 新闻
doi：10.1016/s1360-1385(02)02334-8
更新日期：2002-10-01 00:00:00
abstract：:Metabolism depends on inorganic phosphate (P(i)) as reactant, allosteric effector and regulatory moiety in covalent protein modification. To cope with P(i) shortage (a common situation in many ecosystems), plants activate a set of adaptive responses to enhance P(i) recycling and acquisition by reprogramming metabolism...
journal_title：Trends in plant science
pub_type： 杂志文章,评审
doi：10.1016/j.tplants.2004.09.003
更新日期：2004-11-01 00:00:00
abstract：:Serine/threonine-specific phosphoprotein phosphatases (PPPs) are ubiquitous enzymes in all eukaryotes, but their regulatory functions are largely unknown in higher plants. The Arabidopsis genome encodes 26 PPP catalytic subunits related to type 1, type 2A and so-called novel phosphatases, including four plant-specific...
journal_title：Trends in plant science
pub_type： 杂志文章,评审
doi：10.1016/j.tplants.2007.03.003
更新日期：2007-04-01 00:00:00
abstract：:CURT1 proteins induce membrane curvature to grana margins in Arabidopsis (Arabidopsis thaliana) thylakoids. A domain sharing sequence and structural features with CURT1 is found in some cyanobacterial aminoacyl-tRNA synthetases (aaRSs) that show an unusual localization to the thylakoid membranes. Evolutionary scenario...
journal_title：Trends in plant science
pub_type： 杂志文章,评审
doi：10.1016/j.tplants.2013.12.004
更新日期：2014-02-01 00:00:00
abstract：:The plant fungal pathogen Fusarium oxysporum (Fox) is the causal agent of root rot or wilt diseases in several plant species, including crops such as tomato (Solanum lycopersicum), banana (Musa sapientum) and asparagus (Asparagus officinalis). Colonization of plants by Fox leads to the necrosis of the infected tissues...
journal_title：Trends in plant science
pub_type： 杂志文章,评审
doi：10.1016/j.tplants.2007.12.004
更新日期：2008-03-01 00:00:00
abstract：:As a son of an engineer who traveled widely during his career, Heribert Hirt began his life in the exotic country of Iran, before receiving his high-school education in Germany and then studying biochemistry at the University of Cape Town and then later at the University of Vienna, from where he received his PhD in 19...
journal_title：Trends in plant science
pub_type： 传,历史文章,面试
doi：10.1016/j.tplants.2015.11.007
更新日期：2016-01-01 00:00:00
abstract：:Aquaporins are water channel proteins of vacuolar and plasma membranes. When opened they facilitate the passive movement of water molecules down a water potential gradient. In Arabidopsis, 30 genes have been found that code for aquaporin homologues. Some of these genes code for highly abundant constitutively expressed...
journal_title：Trends in plant science
pub_type： 杂志文章
doi：10.1016/s1360-1385(99)01438-7
更新日期：1999-08-01 00:00:00
abstract：:The secretory pathway encloses functionally interlinked organelles for the synthesis and deposition of most of the building blocks of eukaryotic cells, such as lipids, proteins and sugars. The coat protein complex II (COPII) is a specialized protein complex for the transport between secretory organelles, specifically ...
journal_title：Trends in plant science
pub_type： 杂志文章,评审
doi：10.1016/j.tplants.2010.05.010
更新日期：2010-09-01 00:00:00
abstract：:Farmers and breeders have long known that often it is the simultaneous occurrence of several abiotic stresses, rather than a particular stress condition, that is most lethal to crops. Surprisingly, the co-occurrence of different stresses is rarely addressed by molecular biologists that study plant acclimation. Recent ...
journal_title：Trends in plant science
pub_type： 杂志文章,评审
doi：10.1016/j.tplants.2005.11.002
更新日期：2006-01-01 00:00:00
abstract：:During the past decade, much progress has been made toward understanding the mechanisms underlying plant hormone activity, from perception to nuclear events. However, the signaling mechanisms for abscisic acid (ABA) have remained largely obscure. Recent breakthroughs identifying FCA, which is an RNA-binding protein, t...
journal_title：Trends in plant science
pub_type： 杂志文章,评审
doi：10.1016/j.tplants.2007.06.013
更新日期：2007-08-01 00:00:00
abstract：:It is challenging to understand how plants adapt flowering time to novel environmental conditions, such as global warming, while maintaining plasticity in response to daily fluctuating temperatures. A recent study shows a role for transposons and highlights the need to investigate how these different responses evolved...
journal_title：Trends in plant science
pub_type： 评论,杂志文章
doi：10.1016/j.tplants.2015.11.015
更新日期：2016-01-01 00:00:00
abstract：:Signal transduction pathways often modulate both positively and negatively acting components to optimize the efficiency of a signal. Recent results have shown that plants make extensive use of regulated proteolysis to modulate signal transduction pathways. An emerging theme from hormone (e.g. auxin and gibberellin) an...
journal_title：Trends in plant science
pub_type： 杂志文章,评审
doi：10.1016/j.tplants.2005.11.005
更新日期：2006-01-01 00:00:00
abstract：:Polar growth in root hairs and pollen tubes is an excellent model for investigating plant cell size regulation. While linear plant growth is historically explained by the acid growth theory, which considers that auxin triggers apoplastic acidification by activating plasma membrane P-type H+-ATPases (AHAs) along with c...
journal_title：Trends in plant science
pub_type： 杂志文章,评审
doi：10.1016/j.tplants.2018.02.008
更新日期：2018-06-01 00:00:00
abstract：:Elucidation of the molecular basis of gene-for-gene interactions between disease-resistance (R) genes and pathogen avirulence (avr) genes has been a Holy Grail of plant pathology for the past decade. Recent studies of the R-avr interaction between RRS1-R and popP2 by Laurent Deslandes et al. provide new insights and s...
journal_title：Trends in plant science
pub_type： 杂志文章
doi：10.1016/j.tplants.2003.11.002
更新日期：2004-01-01 00:00:00
abstract：:Eating plant-derived compounds can lead to a longer and healthier life and also benefits the environment. Innovation in the fresh food sector, as well as new cultivars, can improve consumption of fruit and vegetables, with MYB transcription factors being a target to drive this novelty. Plant MYB transcription factors ...
journal_title：Trends in plant science
pub_type： 杂志文章,评审
doi：10.1016/j.tplants.2018.06.001
更新日期：2018-08-01 00:00:00
