Polyphosphoprotein from the adhesive pads of Mytilus edulis.

Abstract:

:Achieving a satisfactory biochemical explanation for the opportunistic underwater adhesion of marine invertebrates such as mussels and barnacles requires a detailed characterization of proteins extracted from holdfast structures produced by these organisms. Mefp-5 is an adhesive protein derived from the foot of the common mussel, Mytilus edulis, and deposited into the byssal attachment pads. Purification and primary structure of mefp-5 was determined by peptide mapping and cDNA sequencing. The protein is 74 residues long and has a mass of about 9500 Da. Mefp-5 composition shows a strong amino acid bias: aromatic amino acids, lysine, and glycine represent 65 mol % of the composition. More than a third of all the residues in the protein are posttranslationally modified by hydroxylation or phosphorylation. The conversion of tyrosine to 3, 4-dihydroxyphenyl-L-alanine (DOPA) and serine to O-phosphoserine accounts for the hydroxylation and phosphorylation, respectively. Neither modification is complete since variations in the extent of phosphorylation and hydroxylation can be detected by mass spectrometry. More than 75% of the DOPA is adjacent to basic residues, e.g., Lys-DOPA and DOPA-Lys. Phosphoserine occurs in sequences strikingly reminiscent of acidic mineral-binding motifs that appear in statherin, osteopontin, and others. This may be an adaptation for adhesion to the most common substrata for mussels, i.e., calcareous materials.

journal_name

Biochemistry

journal_title

Biochemistry

authors

Waite JH,Qin X

doi

10.1021/bi002718x

subject

Has Abstract

pub_date

2001-03-06 00:00:00

pages

2887-93

issue

9

eissn

0006-2960

issn

1520-4995

pii

bi002718x

journal_volume

40

pub_type

杂志文章
  • Specificity of antiparallel DNA triple helix formation.

    abstract::We have used DNase I footprinting to examine the formation of antiparallel DNA triple helices on DNA fragments containing the homopurine target sites (GGA)2GGX(GGA)2GG.(CCT)2CCZ(CCT)2CC (where X.Z is each base pair in turn), with the GA- and GT-rich oligonucleotides, (GGA)2GGN(GGA)2GG and (GGT)2GGN(GGT)2GG (N = each b...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9609679

    authors: Chandler SP,Fox KR

    更新日期:1996-11-26 00:00:00

  • Purification and characterization of the purE, purK, and purC gene products: identification of a previously unrecognized energy requirement in the purine biosynthetic pathway.

    abstract::Aminoimidazole riobnucleotide carboxylase, the sixth step in the purine biosynthetic pathway, catalyzes the conversion of aminoimidazole ribonucleotide (AIR) to carboxyaminoimidazole ribonucleotide (CAIR). The gene products of the purE and purK genes (PurE and PurK, respectively) thought to be responsible for this act...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00136a016

    authors: Meyer E,Leonard NJ,Bhat B,Stubbe J,Smith JM

    更新日期:1992-06-02 00:00:00

  • How fumarase recycles after the malate --> fumarate reaction. Insights into the reaction mechanism.

    abstract::Recycling of yeast fumarase to permit repetition of its reaction chemistry requires two proton transfers and two conformational changes, in pathways that are different in detail but thematically similar in the two directions. In the malate --> fumarate direction, simple anions such as acetate accelerate the fumarate-o...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9821521

    authors: Rose IA

    更新日期:1998-12-22 00:00:00

  • Potentiation of progesterone receptor-mediated transcription by the immunosuppressant FK506.

    abstract::The nontransformed steroid receptors contain several non-steroid binding proteins, such as hsp90, hsp70, and p59. Recently, we and others have shown that p59 (FKBP59) is an immunophilin which binds two potent immunosuppressants, FK506 and rapamycin. This raises the possibility that FK506 or rapamycin may modify the fu...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00201a014

    authors: Tai PK,Albers MW,McDonnell DP,Chang H,Schreiber SL,Faber LE

    更新日期:1994-09-06 00:00:00

  • Magnetic circular dichroism studies on the mononuclear ferrous active site of phthalate dioxygenase from Pseudomonas cepacia show a change of ligation state on substrate binding.

    abstract::Phthalate dioxygenase from Pseudomonas cepacia contains a mononuclear ferrous center that is strictly required for catalytic oxygen activation. The spectroscopic characterization of this iron site and its ligand interactions has been complicated in the past by interference from a Rieske-type binuclear (2Fe-2S) cluster...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00069a017

    authors: Gassner GT,Ballou DP,Landrum GA,Whittaker JW

    更新日期:1993-05-11 00:00:00

  • Structure-function relationships of the Escherichia coli ATP synthase probed by trypsin digestion.

    abstract::Trypsin cleavage has been used to probe structure-function relationships of the Escherichia coli ATP synthase (ECF1F0). Trypsin cleaved all five subunits, alpha, beta, gamma, delta, and epsilon, in isolated ECF1. Cleavage of the alpha subunit involved the removal of the N-terminal 15 residues, the beta subunit was cle...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00402a016

    authors: Gavilanes-Ruiz M,Tommasino M,Capaldi RA

    更新日期:1988-01-26 00:00:00

  • Michler's hydrol blue: a sensitive probe for amyloid fibril detection.

    abstract::Michler's hydrol blue (MHB) is investigated with respect to photophysical properties in varied solvent environment and when bound to insulin and lysozyme fibrils. The MHB chromophore is shown to act like a molecular rotor and bind well to amyloid fibrils, where it exhibits a characteristic red-shift in its excitation ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi102016p

    authors: Kitts CC,Beke-Somfai T,Nordén B

    更新日期:2011-05-03 00:00:00

  • Engineering the independent folding of the subtilisin BPN' pro-domain: correlation of pro-domain stability with the rate of subtilisin folding.

    abstract::The 77-amino acid pro-domain greatly accelerates the in vitro folding of subtilisin in a bimolecular reaction whose product is a tight complex between folded subtilisin and folded pro-domain. In this complex the pro-domain has a compact structure with a four-stranded antiparallel beta-sheet and two three-turn alpha-he...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi972741r

    authors: Wang L,Ruan B,Ruvinov S,Bryan PN

    更新日期:1998-03-03 00:00:00

  • Influence of Na+ on conformational states in membrane-bound renal Na,K-ATPase.

    abstract::Conformational states of the Na,K-ATPase and rates of transition between these are studied using the fluorescent dye eosin as a marker for the Na+ form (E1) and occlusion of 86Rb+ as a marker for the K+ form (E2). The aim of the present paper is to propose that the E1 form of the Na,K-ATPase can be liganded with a num...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00194a022

    authors: Esmann M

    更新日期:1994-07-19 00:00:00

  • Kinetic analysis of product inhibition in human manganese superoxide dismutase.

    abstract::Manganese superoxide dismutase (MnSOD) cycles between the Mn(II) and Mn(III) states during the catalyzed disproportionation of O(2)(*-), a catalysis that is limited at micromolar levels of superoxide by a peroxide-inhibited complex with the metal. We have investigated the role in catalysis and inhibition of the conser...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi011047f

    authors: Hearn AS,Stroupe ME,Cabelli DE,Lepock JR,Tainer JA,Nick HS,Silverman DN

    更新日期:2001-10-09 00:00:00

  • CLAC binds to aggregated Abeta and Abeta fragments, and attenuates fibril elongation.

    abstract::Deposition of amyloid beta-peptide (Abeta) into amyloid plaques is one of the invariant neuropathological features of Alzheimer's disease. Proteins that codeposit with Abeta are potentially important for the pathogenesis, and a recently discovered plaque-associated protein is the collagenous Alzheimer amyloid plaque c...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi051263e

    authors: Kakuyama H,Söderberg L,Horigome K,Winblad B,Dahlqvist C,Näslund J,Tjernberg LO

    更新日期:2005-11-29 00:00:00

  • Structure and function of ubiquitin: evidence for differential interactions of arginine-74 with the activating enzyme and the proteases of ATP-dependent proteolysis.

    abstract::Ubiquitin was modified with the anionic, arginine-specific reagent 4-(oxoacetyl)phenoxyacetic acid in order to study the relationship between structure and function of the molecule. Four different derivatives (A, B, C, and D) were purified from the reaction mixture by anion-exchange high-performance liquid chromatogra...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00396a019

    authors: Duerksen-Hughes PJ,Xu XX,Wilkinson KD

    更新日期:1987-11-03 00:00:00

  • Phosphorylation mechanism of nucleoside diphosphate kinase: 31P-nuclear magnetic resonance studies.

    abstract::The phosphorylation mechanism of Dictyostelium discoideum nucleoside diphosphate (NDP) kinase was investigated by NMR. 31P chemical shifts were measured on both native and denatured enzyme. In the enzymatically phosphorylated enzyme denatured by 9 M urea or 7 M guanidine hydrochloride, the NDP kinase phosphohistidine ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00038a043

    authors: Lecroisey A,Lascu I,Bominaar A,Véron M,Delepierre M

    更新日期:1995-09-26 00:00:00

  • Purification and properties of a novel nucleolar exoribonuclease capable of degrading both single-stranded and double-stranded RNA.

    abstract::A ribonuclease that hydrolyzes either linear duplex or single-stranded RNA in an exonucleolytic manner has been partially purified from Ehrlich ascites tumor cell nucleoli and is free from other ribonucleases. The enzyme will also degrade the RNA complement of an RNA X DNA duplex; however, no nuclease activity is obse...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00324a022

    authors: Eichler DC,Eales SJ

    更新日期:1985-01-29 00:00:00

  • Engineering of the nonspecific phospholipase C from Bacillus cereus: replacement of glutamic acid-4 by alanine results in loss of interfacial catalysis and enhanced phosphomonoesterase activity.

    abstract::The nonspecific phospholipase C from Bacillus cereus is a zinc metalloenzyme that catalyzes the hydrolysis of phospholipids to yield diacylglycerol and a phosphate monoester. Glu-4 has been proposed as a potential candidate for the general base in the hydrolysis reaction and was shown to interact with the substrate he...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi972751s

    authors: Tan CA,Roberts MF

    更新日期:1998-03-24 00:00:00

  • 1H NMR sequential resonance assignments, secondary structure, and global fold in solution of the major (trans-Pro43) form of bovine calbindin D9k.

    abstract::A wide range of two-dimensional 1H NMR experiments have been used to completely assign the 500-MHz 1H NMR spectrum of recombinant Ca2+-saturated bovine calbindin D9k (76 amino acids, Mr = 8500). In solution, calbindin D9k exists as an equilibrium mixture of isoforms with trans (75%) and cis (25%) isomers of the peptid...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00443a043

    authors: Kördel J,Forsén S,Chazin WJ

    更新日期:1989-08-22 00:00:00

  • An experimental approach to evaluating the role of backbone interactions in proteins using unnatural amino acid mutagenesis.

    abstract::The contribution of backbone hydrogen bonds in alpha-helices to the overall stability of a protein has been examined experimentally by replacing several backbone amide linkages in alpha-helix 39-50 of T4 lysozyme with ester linkages. T4 lysozyme variants wherein the backbone amide bonds between residues Ser38 and Leu3...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi9707685

    authors: Koh JT,Cornish VW,Schultz PG

    更新日期:1997-09-23 00:00:00

  • Temperature dependence of the epidermal growth factor receptor signaling network can be accounted for by a kinetic model.

    abstract::Stimulation of isolated hepatocytes with epidermal growth factor (EGF) causes rapid tyrosine phosphorylation of the EGF receptor (EGFR) and adapter/target proteins, which was monitored with 1 and 2 s resolution at 37, 20, and 4 degrees C. The temporal responses detected for multiple signaling proteins involve both tra...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi011506c

    authors: Moehren G,Markevich N,Demin O,Kiyatkin A,Goryanin I,Hoek JB,Kholodenko BN

    更新日期:2002-01-08 00:00:00

  • Mechanistic studies with deuterated dihydroorotates on the dihydroorotate oxidase from Crithidia fasciculata.

    abstract::Deuterium-labeled dihydroorotates bearing one, two, or three deuteriums at the pair of C4 and C5 positions have been synthesized in high isotopic and chiral purity and characterized by NMR and mass spectroscopy. These substrates have been used with the FMN-containing biosynthetic dihydroorotate oxidase from Crithidia ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00307a033

    authors: Pascal RA Jr,Walsh CT

    更新日期:1984-06-05 00:00:00

  • Substrate analogs as mechanistic probes for the bifunctional chorismate synthase from Neurospora crassa.

    abstract::Analogs of EPSP (4-8) have been prepared, and their activity as substrates for the chorismate synthase from Neurospora crassa has been characterized kinetically. The enzyme appears to show strict discrimination against substitution at the Z-position of the enol ether side chain as well as against substitution at the S...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00251a019

    authors: Lauhon CT,Bartlett PA

    更新日期:1994-11-29 00:00:00

  • Interactions of a Bacterial Cu(I)-ATPase with a Complex Lipid Environment.

    abstract::Phospholipids and sterols play multiple roles in cells. In addition to establishing barriers between compartments, they also provide the matrix for assembly and function of a large variety of catalytic processes. Lipid composition is a highly regulated feature of biological membranes, yet its implications for membrane...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/acs.biochem.8b00326

    authors: Autzen HE,Koldsø H,Stansfeld PJ,Gourdon P,Sansom MSP,Nissen P

    更新日期:2018-07-17 00:00:00

  • Sp1-targeted inhibition of gene transcription by WP631 in transfected lymphocytes.

    abstract::The binding of Sp1 transcription factor to DNA is considered a potential target for small ligands designed to interfere with gene transcription. We attempted to distinguish the direct inhibition of the Sp1-binding to DNA in vivo (cell culture) from more indirect effects due to the network of pathways that modulate cel...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi036185e

    authors: Mansilla S,Priebe W,Portugal J

    更新日期:2004-06-15 00:00:00

  • Chemical cross-linking of heteromeric glucocorticoid receptors.

    abstract::Glucocorticoid receptors of wild-type and nti ("increased nuclear transfer") mutant S49.1 mouse lymphoma cells exist in extracts under low-salt conditions predominantly as high molecular weight species (Mr greater than or equal to 300,000). These receptor-hormone complexes are unable to bind to DNA. High salt (300 mM ...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00415a030

    authors: Rexin M,Busch W,Gehring U

    更新日期:1988-07-26 00:00:00

  • The mast cell function-associated antigen and its interactions with the type I Fcepsilon receptor.

    abstract::Rat mucosal-type mast cells of the RBL-2H3 line express a glycoprotein termed the MAst cell Function-associated Antigen (MAFA). When MAFA is clustered by its specific monoclonal antibody G63, secretion normally triggered by aggregating these cells' type I Fcepsilon receptor (FcepsilonRI) is substantially inhibited. Th...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi011566i

    authors: Song J,Hagen GM,Roess DA,Pecht I,Barisas BG

    更新日期:2002-01-22 00:00:00

  • Structure of botulinum neurotoxin type D light chain at 1.65 A resolution: repercussions for VAMP-2 substrate specificity.

    abstract::The seven serotypes (A-G) of botulinum neurotoxins (BoNTs) function through their proteolytic cleavage of one of three proteins (SNAP-25, Syntaxin, and VAMP) that form the SNARE complex required for synaptic vesicle fusion. The different BoNTs have very specific protease recognition requirements, between 15 and 50 ami...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi052518r

    authors: Arndt JW,Chai Q,Christian T,Stevens RC

    更新日期:2006-03-14 00:00:00

  • Linkage between ligand binding and control of tubulin conformation.

    abstract::The effect of both antimitotic drugs and nucleotide analogues on the magnesium-induced self-association of purified tubulin into 42S double rings has been examined by sedimentation velocity. In the absence of magnesium, all complexes sedimented as the 5.8S species. The binding of colchicine to tubulin led to a small b...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00149a044

    authors: Shearwin KE,Timasheff SN

    更新日期:1992-09-01 00:00:00

  • Interaction of carbohydrate binding sites on concanavalin A-agarose with receptors on adipocytes studied by buoyant density method.

    abstract::The interaction of concanavalin A (Con A) with isolated adipocytes was studied using Con A-Sepharose beads in the affinity binding buoyant density method previously used to study insulin receptors. Free Con A-Sepharose beads could be separated from the bound beads (cell-bead complexes) by sedimentation of the high den...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi00682a003

    authors: Katzen HM,Soderman DD

    更新日期:1975-06-03 00:00:00

  • Hematin-hematin self-association states involved in the formation and reactivity of the malaria parasite pigment, hemozoin.

    abstract::The malaria parasite pigment, hemozoin, is a crystal of ferriprotoporphyrin IX (FP-Fe(III)), a product of hemoglobin digestion. Hemozoin formation is essential for FP-Fe(III) detoxification in the parasite; it is the main target of quinoline antimalarials and can modulate immune and inflammation responses. To gain fur...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi100567j

    authors: Klonis N,Dilanian R,Hanssen E,Darmanin C,Streltsov V,Deed S,Quiney H,Tilley L

    更新日期:2010-08-10 00:00:00

  • Alteration of conformation and dynamics of bacteriorhodopsin induced by protonation of Asp 85 and deprotonation of Schiff base as studied by 13C NMR.

    abstract::According to previous X-ray diffraction studies, the D85N mutant of bacteriorhodopsin (bR) with unprotonated Schiff base assumes a protein conformation similar to that in the M photointermediate. We recorded (13)C NMR spectra of [3-(13)C]Ala- and [1-(13)C]Val-labeled D85N and D85N/D96N mutants at ambient temperature t...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi0015820

    authors: Kawase Y,Tanio M,Kira A,Yamaguchi S,Tuzi S,Naito A,Kataoka M,Lanyi JK,Needleman R,Saitô H

    更新日期:2000-11-28 00:00:00

  • Thermodynamics and NMR of internal G.T mismatches in DNA.

    abstract::Thermodynamics of 39 oligonucleotides with internal G.T mismatches dissolved in 1 M NaCl were determined from UV absorbance versus temperature profiles. These data were combined with literature values of six sequences to derive parameters for 10 linearly independent trimer and tetramer sequences with G.T mismatches an...

    journal_title:Biochemistry

    pub_type: 杂志文章

    doi:10.1021/bi962590c

    authors: Allawi HT,SantaLucia J Jr

    更新日期:1997-08-26 00:00:00