Generalized approach to the regulation and integration of gene expression.

Abstract:

:The volume of electron flow through the cbb3 branch of the electron transport chain and the redox state of the quinone pool generate signals that regulate photosynthesis gene expression in Rhodobacter sphaeroides. An inhibitory signal is generated at the level of the catalytic subunit of the cbb3 cytochrome c oxidase and is transduced through the membrane-localized PrrC polypeptide to the PrrBA two-component activation system, which controls the expression of most of the photosynthesis genes in response to O2. The redox state of the quinone pool is monitored by the redox-active AppA antirepressor protein, which determines the functional state of the PpsR repressor protein. The antirepressor/repressor system as well as a modulator of AppA function, TspO, together with FnrL and PrrA stringently control photopigment gene expression. These regulatory elements, together with spectral complex-specific assembly factors, control the ultimate cellular levels and composition of the photosynthetic membrane.

journal_name

Mol Microbiol

journal_title

Molecular microbiology

authors

Oh JI,Kaplan S

doi

10.1111/j.1365-2958.2001.02299.x

subject

Has Abstract

pub_date

2001-03-01 00:00:00

pages

1116-23

issue

5

eissn

0950-382X

issn

1365-2958

pii

mmi2299

journal_volume

39

pub_type

杂志文章,评审
  • PspF and IHF bind co-operatively in the psp promoter-regulatory region of Escherichia coli.

    abstract::PspF bound to the psp enhancer activates E sigma54 holoenzyme-dependent transcription of the Escherichia coli phage-shock protein (psp) operon and autogenously represses its own sigma70-dependent transcription, thereby keeping its concentration at a low level. It has been demonstrated previously that integration host ...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2958.1997.4791844.x

    authors: Jovanovic G,Model P

    更新日期:1997-08-01 00:00:00

  • Analysis of the gene cluster involved in production and immunity of the peptide antibiotic AS-48 in Enterococcus faecalis.

    abstract::A region of 7.8 kb of the plasmid pMB2 from Enterococcus faecalis S-48 carrying the information necessary for production and immunity of the peptide antibiotic AS-48 has been cloned and sequenced. It contains the as-48A structural gene plus five open reading frames (as-48B, as-48C, as-48C1, as-48D and as-48D1). Beside...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2958.1998.00682.x

    authors: Martínez-Bueno M,Valdivia E,Gálvez A,Coyette J,Maqueda M

    更新日期:1998-01-01 00:00:00

  • 'Muprints' of the lac operon demonstrate physiological control over the randomness of in vivo transposition.

    abstract::A method called Muprinting has been developed that uses PCR to generate a detailed picture of the bacteriophage Mu transposition sites in chosen domains of the bacterial chromosome. Muprinting experiments in Escherichia coli show that the frequency of phage integration changes dramatically near two repressor binding s...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.1994.tb01054.x

    authors: Wang X,Higgins NP

    更新日期:1994-05-01 00:00:00

  • Cloning and characterization of fxp, the flexible pilin gene of Aeromonas hydrophila.

    abstract::The flexible pilus of Aeromonas hydrophila is a morphologically and biochemically unique organelle which binds eukaryotic cell surfaces and whose expression is induced by specific physiochemical conditions. fxp, the structural gene coding for the flexible pilus subunit, was localized on a 7.6kb plasmid of A. hydrophil...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.1992.tb01449.x

    authors: Ho AS,Sohel I,Schoolnik GK

    更新日期:1992-09-01 00:00:00

  • A novel DnaA protein-binding site at 94.7 min on the Escherichia coli chromosome.

    abstract::There is a DNA sequence which has unusually high affinity for the DnaA protein of Escherichia coli between the glyV and amiB-mutL operons at 94.7 min on the genetic map. Affinity of DnaA protein for DNA was measured in vivo as the activity of beta-galactosidase produced from the lacZ gene on a plasmid fused to the 5'-...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2958.1996.453983.x

    authors: Kitagawa R,Mitsuki H,Okazaki T,Ogawa T

    更新日期:1996-03-01 00:00:00

  • The Brucella abortus Lon functions as a generalized stress response protease and is required for wild-type virulence in BALB/c mice.

    abstract::The gene encoding a Lon protease homologue has been cloned from Brucella abortus. The putative Brucella abortus Lon shares > 60% amino acid identity with its Escherichia coli counterpart and the recombinant form of this protein restores the capacity of an Escherichia coli lon mutant to resist killing by ultraviolet ir...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2958.2000.01726.x

    authors: Robertson GT,Kovach ME,Allen CA,Ficht TA,Roop RM 2nd

    更新日期:2000-02-01 00:00:00

  • Making ends meet in mycobacteria.

    abstract::Genotoxic agents from endogenous and exogenous sources cause double-strand breaks (DSBs) in chromosomal DNA. Given the threat these lesions pose to viability, it is not surprising that multiple, conserved mechanisms exist for their detection, processing and repair. Previous studies have established both functional non...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.2010.07462.x

    authors: Warner DF,Mizrahi V

    更新日期:2011-01-01 00:00:00

  • Getting down to malarial nuts and bolts: the interaction between Plasmodium vivax merozoites and their host erythrocytes.

    abstract::Of the four Plasmodium species that routinely cause malaria in humans, Plasmodium falciparum is responsible for the majority of malaria mortality and consequently gets most of the headlines. Outside Africa, however, more malaria cases are caused by its distant cousin Plasmodium vivax, resulting in a daunting morbidity...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.2005.04518.x

    authors: Rayner J

    更新日期:2005-03-01 00:00:00

  • Septal membrane fusion--a pivotal event in bacterial spore formation?

    abstract::Formation of the asymmetrically located septum divides sporulating bacilli into two distinct cells: the mother cell and the prespore. The rigidifying wall material in the septum is subsequently removed by autolysis. Examination of published electron micrographs indicates that the two septal membranes then fuse to form...

    journal_title:Molecular microbiology

    pub_type: 杂志文章,评审

    doi:10.1111/j.1365-2958.1992.tb01433.x

    authors: Higgins ML,Piggot PJ

    更新日期:1992-09-01 00:00:00

  • A nuclear protein NsiA from Epichloë festucae interacts with a MAP kinase MpkB and regulates the expression of genes required for symbiotic infection and hyphal cell fusion.

    abstract::The endophytic fungus Epichloë festucae systemically colonizes the intercellular spaces of cool-season grasses to establish a mutualistic symbiosis. Hyphal growth of the endophyte within the host plant is tightly regulated and synchronized with the growth of the host plant. A genetic screen to identify symbiotic genes...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/mmi.14568

    authors: Tanaka A,Kamiya S,Ozaki Y,Kameoka S,Kayano Y,Saikia S,Akano F,Uemura A,Takagi H,Terauchi R,Maruyama JI,Hammadeh HH,Fleissner A,Scott B,Takemoto D

    更新日期:2020-10-01 00:00:00

  • Probing the active site of mitogillin, a fungal ribotoxin.

    abstract::Fungal ribotoxins, such as mitogillin and the related Aspergillus toxins restrictocin and alpha-sarcin, are highly specific ribonucleases, which inactivate the ribosome enzymatically by cleaving the eukaryotic 28S RNA of the large ribosomal subunit at a single phosphodiester bond. The site of cleavage occurs between G...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2958.1998.00987.x

    authors: Kao R,Shea JE,Davies J,Holden DW

    更新日期:1998-08-01 00:00:00

  • Ureaplasma antigenic variation beyond MBA phase variation: DNA inversions generating chimeric structures and switching in expression of the MBA N-terminal paralogue UU172.

    abstract::Phase variation of the major ureaplasma surface membrane protein, the multiple-banded antigen (MBA), with its counterpart, the UU376 protein, was recently discussed as a result of DNA inversion occurring at specific inverted repeats. Two similar inverted repeats to the ones within the mba locus were found in the genom...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.2010.07474.x

    authors: Zimmerman CU,Rosengarten R,Spergser J

    更新日期:2011-02-01 00:00:00

  • Characterization of a membrane-linked Ser/Thr protein kinase in Bacillus subtilis, implicated in developmental processes.

    abstract::PrkC was shown to be a eukaryotic-like (Hanks-type) protein kinase from Bacillus subtilis with a structural organization similar to that of the eukaryotic sensor Ser/Thr or Tyr kinases (e.g. the TGF beta or PDGF receptors). The molecule consists of a catalytic domain located in the cytoplasm, joined by a single transm...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2958.2002.03178.x

    authors: Madec E,Laszkiewicz A,Iwanicki A,Obuchowski M,Séror S

    更新日期:2002-10-01 00:00:00

  • Activation of biosynthetic gene clusters by the global transcriptional regulator TRI6 in Fusarium graminearum.

    abstract::In F. graminearum, the transcription factor TRI6 positively regulates the trichothecene biosynthetic gene cluster (BGC) leading to the production of the secondary metabolite 15-acetyl deoxynivalenol. Secondary metabolites are not essential for survival, instead, they enable the pathogen to successfully infect its host...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/mmi.14575

    authors: Shostak K,Bonner C,Sproule A,Thapa I,Shields SWJ,Blackwell B,Vierula J,Overy D,Subramaniam R

    更新日期:2020-10-01 00:00:00

  • An experimentalist's guide to computational modelling of the Min system.

    abstract::Spatio-temporal oscillations of the Min proteins are essential for selecting the cell division site in Escherichia coli. These oscillations are a key example of a biological phenomenon that can only be understood on a systems level rather than on the level of its individual components. Here, we review the key concepts...

    journal_title:Molecular microbiology

    pub_type: 杂志文章,评审

    doi:10.1111/j.1365-2958.2007.05607.x

    authors: Kruse K,Howard M,Margolin W

    更新日期:2007-03-01 00:00:00

  • Identification of competence pheromone responsive genes in Streptococcus pneumoniae by use of DNA microarrays.

    abstract::Natural genetic transformation in Streptococcus pneumoniae is controlled in part by a quorum-sensing system mediated by a peptide pheromone called competence-stimulating peptide (CSP), which acts to coordinate transient activation of genes required for competence. To characterize the transcriptional response and regul...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2958.2003.03907.x

    authors: Peterson SN,Sung CK,Cline R,Desai BV,Snesrud EC,Luo P,Walling J,Li H,Mintz M,Tsegaye G,Burr PC,Do Y,Ahn S,Gilbert J,Fleischmann RD,Morrison DA

    更新日期:2004-02-01 00:00:00

  • The novel putative transporter NPT1 plays a critical role in early stages of Plasmodium berghei sexual development.

    abstract::Transmission of Plasmodium species from a mammalian host to the mosquito vector requires the uptake, during an infected blood meal, of gametocytes, the precursor cells of the gametes. Relatively little is known about the molecular mechanisms involved in the developmental switch from asexual development to sexual diffe...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.2011.07767.x

    authors: Boisson B,Lacroix C,Bischoff E,Gueirard P,Bargieri DY,Franke-Fayard B,Janse CJ,Ménard R,Baldacci P

    更新日期:2011-09-01 00:00:00

  • Back to log phase: sigma S as a global regulator in the osmotic control of gene expression in Escherichia coli.

    abstract::It is now well established that the sigma S subunit of RNA polymerase is a master regulator in a complex regulatory network that governs the expression of many stationary-phase-inducible genes in Escherichia coli. In this review, more recent findings will be summarized that demonstrate that sigma S also acts as a glob...

    journal_title:Molecular microbiology

    pub_type: 杂志文章,评审

    doi:10.1046/j.1365-2958.1996.511405.x

    authors: Hengge-Aronis R

    更新日期:1996-09-01 00:00:00

  • Differential regulation of antibiotic biosynthesis by DraR-K, a novel two-component system in Streptomyces coelicolor.

    abstract::A novel two-component system (TCS) designated as DraR-K (sco3063/sco3062) was identified to be involved in differential regulation of antibiotic biosynthesis in Streptomyces coelicolor. The S. coelicolor mutants with deletion of either or both of draR and draK exhibited significantly reduced actinorhodin (ACT) but inc...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.2012.08126.x

    authors: Yu Z,Zhu H,Dang F,Zhang W,Qin Z,Yang S,Tan H,Lu Y,Jiang W

    更新日期:2012-08-01 00:00:00

  • The inflammation-associated Salmonella SopA is a HECT-like E3 ubiquitin ligase.

    abstract::Salmonella translocate a group of type III effectors into the host cells to induce entry, promote survival and cause intestinal inflammation. Although the biochemical and cellular mechanisms of how bacterial effectors function inside host cells remain largely unknown, studies have indicated that a likely strategy is t...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.2006.05407.x

    authors: Zhang Y,Higashide WM,McCormick BA,Chen J,Zhou D

    更新日期:2006-11-01 00:00:00

  • The mitochondrial protein targeting suppressor (mts1) mutation maps to the mRNA-binding domain of Npl3p and affects translation on cytoplasmic polysomes.

    abstract::In all eukaryotic organisms, messenger RNA (mRNA) is synthesized in the nucleus and then exported to the cytoplasm for translation. The export reaction requires the concerted action of a large number of protein components, including a set of shuttle proteins that can exit and re-enter the nucleus through the nuclear p...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2958.2000.01765.x

    authors: Gratzer S,Beilharz T,Beddoe T,Henry MF,Lithgow T

    更新日期:2000-03-01 00:00:00

  • Expression of the Escherichia coli pcnB gene is translationally limited using an inefficient start codon: a second chromosomal example of translation initiated at AUU.

    abstract::Expression of the gene pcnB, encoding the dispensable Escherichia coli poly(A) polymerase (PAPI), which is toxic when overproduced, was investigated. Its promoter was identified and found to be moderately strong when used to express a beta-galactosidase reporter. Expression levels were not affected by increasing or de...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2958.2002.02945.x

    authors: Binns N,Masters M

    更新日期:2002-06-01 00:00:00

  • Regular cellular distribution of plasmids by oscillating and filament-forming ParA ATPase of plasmid pB171.

    abstract::Centromere-like loci from bacteria segregate plasmids to progeny cells before cell division. The ParA ATPase (a MinD homologue) of the par2 locus from plasmid pB171 forms oscillating helical structures over the nucleoid. Here we show that par2 distributes plasmid foci regularly along the length of the cell even in cel...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.2006.05322.x

    authors: Ebersbach G,Ringgaard S,Møller-Jensen J,Wang Q,Sherratt DJ,Gerdes K

    更新日期:2006-09-01 00:00:00

  • Structural and transcriptional analysis of the pyrABCN, pyrD and pyrF genes in Aspergillus nidulans and the evolutionary origin of fungal dihydroorotases.

    abstract::The six biochemical steps of the de novo pyrimidine biosynthesis pathway are conserved in all known organisms. However, in animals and fungi, unlike prokaryotes, at least the first two activities are grouped on a multifunctional enzyme. Here, we report cloning, mapping and transcriptional characterization of some pyri...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2958.1999.01507.x

    authors: Aleksenko A,Liu W,Gojkovic Z,Nielsen J,Piskur J

    更新日期:1999-08-01 00:00:00

  • A Bacillus subtilis dipeptide transport system expressed early during sporulation.

    abstract::Two previously identified Bacillus subtilis DNA segments, dciA and dciB, whose transcripts accumulate very rapidly after induction of sporulation, were found in the same 6.2 kb transcription unit, now known as the dciA operon. Analysis of the sequence of the dciA operon showed that its putative products are homologous...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.1991.tb00814.x

    authors: Mathiopoulos C,Mueller JP,Slack FJ,Murphy CG,Patankar S,Bukusoglu G,Sonenshein AL

    更新日期:1991-08-01 00:00:00

  • AvaR2, a pseudo γ-butyrolactone receptor homologue from Streptomyces avermitilis, is a pleiotropic repressor of avermectin and avenolide biosynthesis and cell growth.

    abstract::Avermectins produced by Streptomyces avermitilis are effective anthelmintic agents. The autoregulatory signalling molecule that triggers avermectin biosynthesis is a novel butenolide-type molecule, avenolide, rather than common γ-butyrolactones (GBLs). We identified AvaR2, a pseudo GBL receptor homologue, as an import...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/mmi.13479

    authors: Zhu J,Sun D,Liu W,Chen Z,Li J,Wen Y

    更新日期:2016-11-01 00:00:00

  • Live cell imaging of SOS and prophage dynamics in isogenic bacterial populations.

    abstract::Almost all bacterial genomes contain DNA of viral origin, including functional prophages or degenerated phage elements. A frequent but often unnoted phenomenon is the spontaneous induction of prophage elements (SPI) even in the absence of an external stimulus. In this study, we have analyzed SPI of the large, degenera...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/mmi.13147

    authors: Helfrich S,Pfeifer E,Krämer C,Sachs CC,Wiechert W,Kohlheyer D,Nöh K,Frunzke J

    更新日期:2015-11-01 00:00:00

  • Altered ParA partition proteins of plasmid P1 act via the partition site to block plasmid propagation.

    abstract::The partition system of the P1 plasmid, P1par, consists of the ParA and ParB proteins and a cis-acting site, parS. It is responsible for the orderly segregation of plasmid copies to daughter cells. Plasmids with null mutations in parA or parB replicate normally, but missegregate. ParB binds specifically to the parS si...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2958.1997.4761842.x

    authors: Youngren B,Austin S

    更新日期:1997-09-01 00:00:00

  • Molecular and physiological analysis of an OxyR-regulated ahpC promoter in Xanthomonas campestris pv. phaseoli.

    abstract::In Xanthomonas campestris pv. phaseoli, a gene for the alkyl hydroperoxide reductase subunit C (ahpC) had unique patterns of regulation by various forms of OxyR. Reduced OxyR repressed expression of the gene, whereas oxidized OxyR activated its expression. This dual regulation of ahpC is unique and unlike all other Ox...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1046/j.1365-2958.2000.02107.x

    authors: Loprasert S,Fuangthong M,Whangsuk W,Atichartpongkul S,Mongkolsuk S

    更新日期:2000-09-01 00:00:00

  • Multicopy plasmid instability: the dimer catastrophe hypothesis.

    abstract::Multimer formation reduces plasmid copy number and is an established cause of segregational instability. Nevertheless, it is difficult to rationalize observations that low levels of dimers can cause severe instability, if we assume they are distributed evenly in cell populations. We report here that dimer distribution...

    journal_title:Molecular microbiology

    pub_type: 杂志文章

    doi:10.1111/j.1365-2958.1993.tb01648.x

    authors: Summers DK,Beton CW,Withers HL

    更新日期:1993-06-01 00:00:00