An extensive 3' regulatory region controls expression of Bmp5 in specific anatomical structures of the mouse embryo.

Abstract:

:Bone morphogenetic proteins (BMPs) are secreted signaling molecules that control important developmental events in many different organisms. Previous studies have shown that BMPs are expressed at the earliest stages of skeletal development, and are required for formation of specific skeletal features, strongly suggesting that they are endogenous signals used to control formation of skeletal tissue. Despite the importance of BMP signaling in normal development, very little is known about the mechanisms that control the synthesis and distribution of BMP signals in vertebrates. Here, we identify a large array of cis-acting control sequences that lay out expression of the mouse Bmp5 gene in specific skeletal structures and soft tissues. Some of these elements show striking specificity for particular anatomical features within the skeleton, rather than for cartilage and bone in general. These data suggest that the vertebrate skeleton is built from the sum of many independent domains of BMP expression, each of which may be controlled by separate regulatory elements driving expression at specific anatomical locations. Surprisingly, some of the regulatory sequences in the Bmp5 gene map over 270 kb from the Bmp5 promoter, making them among the most distant elements yet identified in studies of eukaryotic gene expression.

journal_name

Genetics

journal_title

Genetics

authors

DiLeone RJ,Russell LB,Kingsley DM

subject

Has Abstract

pub_date

1998-01-01 00:00:00

pages

401-8

issue

1

eissn

0016-6731

issn

1943-2631

journal_volume

148

pub_type

杂志文章

相关文献

GENETICS文献大全
  • Sojourn times and substitution rate at overdominant and linked neutral loci.

    abstract::The sojourn times until fixation of an overdominant allele were investigated based on the diffusion equation. Furthermore, the rate of accumulation of mutations, or the substitution rate, was predicted from the mean extinction time of a common overdominant allele. The substitution rate calculated theoretically agreed ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Ohashi J,Tokunaga K

    更新日期:2000-06-01 00:00:00

  • A genetic analysis of mortality in pigs.

    abstract::An analysis of mortality is undertaken in two breeds of pigs: Danish Landrace and Yorkshire. Zero-inflated and standard versions of hierarchical Poisson, binomial, and negative binomial Bayesian models were fitted using Markov chain Monte Carlo (MCMC). The objectives of the study were to investigate whether there is s...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.109.110759

    authors: Varona L,Sorensen D

    更新日期:2010-01-01 00:00:00

  • A random mutagenesis approach to isolate dominant-negative yeast sec1 mutants reveals a functional role for domain 3a in yeast and mammalian Sec1/Munc18 proteins.

    abstract::SNAP receptor (SNARE) and Sec1/Munc18 (SM) proteins are required for all intracellular membrane fusion events. SNAREs are widely believed to drive the fusion process, but the function of SM proteins remains unclear. To shed light on this, we screened for dominant-negative mutants of yeast Sec1 by random mutagenesis of...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.108.090423

    authors: Boyd A,Ciufo LF,Barclay JW,Graham ME,Haynes LP,Doherty MK,Riesen M,Burgoyne RD,Morgan A

    更新日期:2008-09-01 00:00:00

  • Estimating Linear and Nonlinear Gene Coexpression Networks by Semiparametric Neighborhood Selection.

    abstract::Whereas nonlinear relationships between genes are acknowledged, there exist only a few methods for estimating nonlinear gene coexpression networks or gene regulatory networks (GCNs/GRNs) with common deficiencies. These methods often consider only pairwise associations between genes, and are, therefore, poorly capable ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.120.303186

    authors: Kontio JAJ,Rinta-Aho MJ,Sillanpää MJ

    更新日期:2020-07-01 00:00:00

  • General Methods for Evolutionary Quantitative Genetic Inference from Generalized Mixed Models.

    abstract::Methods for inference and interpretation of evolutionary quantitative genetic parameters, and for prediction of the response to selection, are best developed for traits with normal distributions. Many traits of evolutionary interest, including many life history and behavioral traits, have inherently nonnormal distribu...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.115.186536

    authors: de Villemereuil P,Schielzeth H,Nakagawa S,Morrissey M

    更新日期:2016-11-01 00:00:00

  • Focused genetic recombination of bacteriophage t4 initiated by double-strand breaks.

    abstract::A model system for studying double-strand-break (DSB)-induced genetic recombination in vivo based on the ets1 segCDelta strain of bacteriophage T4 was developed. The ets1, a 66-bp DNA fragment of phage T2L containing the cleavage site for the T4 SegC site-specific endonuclease, was inserted into the proximal part of t...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Shcherbakov V,Granovsky I,Plugina L,Shcherbakova T,Sizova S,Pyatkov K,Shlyapnikov M,Shubina O

    更新日期:2002-10-01 00:00:00

  • The first steps of transposable elements invasion: parasitic strategy vs. genetic drift.

    abstract::Transposable elements are often considered as selfish DNA sequences able to invade the genome of their host species. Their evolutive dynamics are complex, due to the interaction between their intrinsic amplification capacity, selection at the host level, transposition regulation, and genetic drift. Here, we propose mo...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.104.031211

    authors: Le Rouzic A,Capy P

    更新日期:2005-02-01 00:00:00

  • A deletion map of cyc1 mutants and its correspondence to mutationally altered iso-1-cytochromes c of yeast.

    abstract::Mutants arising spontaneously from sporulated cultures of certain strains of yeast, Saccharomyces cerevisiae, contained deletions of the CYC1 gene which controls the primary structure of iso-1-cytochrome c. At least 60 different kinds of deletions were uncovered among the 104 deletions examined and these ranged in len...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Sherman F,Jackson M,Liebman SW,Schweingruber AM,Stewart JW

    更新日期:1975-09-01 00:00:00

  • Persistence time of loss-of-function mutations at nonessential loci affecting eye color in Drosophila melanogaster.

    abstract::Persistence time of a mutant allele, the expected number of generations before its elimination from the population, can be estimated as the ratio of the number of segregating mutations per individual over the mutation rate per generation. We screened two natural populations of Drosophila melanogaster for mutations cau...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.105.046094

    authors: Yampolsky LY,Allen C,Shabalina SA,Kondrashov AS

    更新日期:2005-12-01 00:00:00

  • Statistical tests of neutrality of mutations.

    abstract::Mutations in the genealogy of the sequences in a random sample from a population can be classified as external and internal. External mutations are mutations that occurred in the external branches and internal mutations are mutations that occurred in the internal branches of the genealogy. Under the assumption of sele...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Fu YX,Li WH

    更新日期:1993-03-01 00:00:00

  • Parallel genetic and proteomic screens identify Msps as a CLASP-Abl pathway interactor in Drosophila.

    abstract::Regulation of cytoskeletal structure and dynamics is essential for multiple aspects of cellular behavior, yet there is much to learn about the molecular machinery underlying the coordination between the cytoskeleton and its effector systems. One group of proteins that regulate microtubule behavior and its interaction ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.110.115626

    authors: Lowery LA,Lee H,Lu C,Murphy R,Obar RA,Zhai B,Schedl M,Van Vactor D,Zhan Y

    更新日期:2010-08-01 00:00:00

  • Exo1 and Rad24 differentially regulate generation of ssDNA at telomeres of Saccharomyces cerevisiae cdc13-1 mutants.

    abstract::Cell cycle arrest in response to DNA damage depends upon coordinated interactions between DNA repair and checkpoint pathways. Here we examine the role of DNA repair and checkpoint genes in responding to unprotected telomeres in budding yeast cdc13-1 mutants. We show that Exo1 is unique among the repair genes tested be...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.104.027904

    authors: Zubko MK,Guillard S,Lydall D

    更新日期:2004-09-01 00:00:00

  • Four distinct regulatory regions of the cut locus and their effect on cell type specification in Drosophila.

    abstract::The cut gene in Drosophila is necessary in at least one cell type, the external sensory organs, for proper cell type specification and morphogenesis. It is also expressed in a variety of other tissues, where its function is less well characterized. Previous work has demonstrated that mutations affecting all the tissue...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Liu S,McLeod E,Jack J

    更新日期:1991-01-01 00:00:00

  • Dosage-Dependent Modifiers of Homoeotic Mutations in Drosophila melanogaster.

    abstract::The determination of segment identity in Drosophila melanogaster appears to be controlled by a small number of genes. In order to identity new components in the process, we have systematically screened the autosomal complement for loci that show a dosage-dependent interaction with mutations in previously characterized...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Kennison JA,Russell MA

    更新日期:1987-05-01 00:00:00

  • A novel Markov chain monte carlo approach for constructing accurate meiotic maps.

    abstract::Mapping markers from linkage data continues to be a task performed in many genetic epidemiological studies. Data collected in a study may be used to refine published map estimates and a study may use markers that do not appear in any published map. Furthermore, inaccuracies in meiotic maps can seriously bias linkage f...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.105.042705

    authors: George AW

    更新日期:2005-10-01 00:00:00

  • The dynamics of transposable elements in structured populations.

    abstract::We analyzed the dynamics of transposable elements (TEs) according to Wright's island and continent-island models, assuming that selection tends to counter the deleterious effects of TEs. We showed that migration between host populations has no impact on either the existence or the stability of the TE copy number equil...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.104.032243

    authors: Deceliere G,Charles S,Biémont C

    更新日期:2005-01-01 00:00:00

  • Allelic genealogies in sporophytic self-incompatibility systems in plants.

    abstract::Expectations for the time scale and structure of allelic genealogies in finite populations are formed under three models of sporophytic self-incompatibility. The models differ in the dominance interactions among the alleles that determine the self-incompatibility phenotype: In the SSIcod model, alleles act codominantl...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Schierup MH,Vekemans X,Christiansen FB

    更新日期:1998-11-01 00:00:00

  • Estimating the Number of Subpopulations (K) in Structured Populations.

    abstract::A key quantity in the analysis of structured populations is the parameter K, which describes the number of subpopulations that make up the total population. Inference of K ideally proceeds via the model evidence, which is equivalent to the likelihood of the model. However, the evidence in favor of a particular value o...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.115.180992

    authors: Verity R,Nichols RA

    更新日期:2016-08-01 00:00:00

  • Clonal mosaic analysis of EMPTY PERICARP2 reveals nonredundant functions of the duplicated HEAT SHOCK FACTOR BINDING PROTEINs during maize shoot development.

    abstract::The paralogous maize proteins EMPTY PERICARP2 (EMP2) and HEAT SHOCK FACTOR BINDING PROTEIN2 (HSBP2) each contain a single recognizable motif: the coiled-coil domain. EMP2 and HSBP2 accumulate differentially during maize development and heat stress. Previous analyses revealed that EMP2 is required for regulation of hea...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.104.026575

    authors: Fu S,Scanlon MJ

    更新日期:2004-07-01 00:00:00

  • Variance of neutral genetic variances within and between populations for a quantitative character.

    abstract::The variances of genetic variances within and between finite populations were systematically studied using a general multiple allele model with mutation in terms of identity by descent measures. We partitioned the genetic variances into components corresponding to genetic variances and covariances within and between l...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Zeng ZB,Cockerham CC

    更新日期:1991-10-01 00:00:00

  • Epistatic Networks Jointly Influence Phenotypes Related to Metabolic Disease and Gene Expression in Diversity Outbred Mice.

    abstract::Genetic studies of multidimensional phenotypes can potentially link genetic variation, gene expression, and physiological data to create multi-scale models of complex traits. The challenge of reducing these data to specific hypotheses has become increasingly acute with the advent of genome-scale data resources. Multi-...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.116.198051

    authors: Tyler AL,Ji B,Gatti DM,Munger SC,Churchill GA,Svenson KL,Carter GW

    更新日期:2017-06-01 00:00:00

  • Genetic Architectures of Quantitative Variation in RNA Editing Pathways.

    abstract::RNA editing refers to post-transcriptional processes that alter the base sequence of RNA. Recently, hundreds of new RNA editing targets have been reported. However, the mechanisms that determine the specificity and degree of editing are not well understood. We examined quantitative variation of site-specific editing i...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.115.179481

    authors: Gu T,Gatti DM,Srivastava A,Snyder EM,Raghupathy N,Simecek P,Svenson KL,Dotu I,Chuang JH,Keller MP,Attie AD,Braun RE,Churchill GA

    更新日期:2016-02-01 00:00:00

  • Prion variants and species barriers among Saccharomyces Ure2 proteins.

    abstract::As hamster scrapie cannot infect mice, due to sequence differences in their PrP proteins, we find "species barriers" to transmission of the [URE3] prion in Saccharomyces cerevisiae among Ure2 proteins of S. cerevisiae, paradoxus, bayanus, cariocanus, and mikatae on the basis of differences among their Ure2p prion doma...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.108.099929

    authors: Edskes HK,McCann LM,Hebert AM,Wickner RB

    更新日期:2009-03-01 00:00:00

  • Genetic analysis of functional domains within the Drosophila LARK RNA-binding protein.

    abstract::LARK is an essential Drosophila RNA-binding protein of the RNA recognition motif (RRM) class that functions during embryonic development and for the circadian regulation of adult eclosion. LARK protein contains three consensus RNA-binding domains: two RRM domains and a retroviral-type zinc finger (RTZF). To show that ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: McNeil GP,Schroeder AJ,Roberts MA,Jackson FR

    更新日期:2001-09-01 00:00:00

  • Mutational analysis of the open reading frames in the transposable element IS1.

    abstract::IS1 is one of the smallest transposable elements found in bacteria (768 bp). It contains eight overlapping open-reading-frames (ORFs) greater than 50 codons, designated insA to insG and insB'. To determine which of the ORFs actually code for proteins involved in transposition, we have introduced amber codons into each...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Jakowec M,Prentki P,Chandler M,Galas DJ

    更新日期:1988-09-01 00:00:00

  • The element(s) at the nontranscribed Xist locus of the active X chromosome controls chromosomal replication timing in the mouse.

    abstract::In female mammalian cells, the inactive X chromosome is replicated late in S phase while the active X chromosome is replicated earlier. The replication times of the X chromosomes reflect a general trend in which late replication is associated with gene repression and earlier replication with transcriptional competence...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.105.043026

    authors: Diaz-Perez S,Ouyang Y,Perez V,Cisneros R,Regelson M,Marahrens Y

    更新日期:2005-10-01 00:00:00

  • Evolution of anthocyanin biosynthesis in maize kernels: the role of regulatory and enzymatic loci.

    abstract::Understanding which genes contribute to evolutionary change and the nature of the alterations in them are fundamental challenges in evolution. We analyzed regulatory and enzymatic genes in the maize anthocyanin pathway as related to the evolution of anthocyanin-pigmented kernels in maize from colorless kernels of its ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Hanson MA,Gaut BS,Stec AO,Fuerstenberg SI,Goodman MM,Coe EH,Doebley JF

    更新日期:1996-07-01 00:00:00

  • The mutator gene swi8 effects specific mutations in the mating-type region of Schizosaccharomyces pombe.

    abstract::The swi8+ gene of Schizosaccharomyces pombe appears to be involved in the termination step of copy synthesis during mating-type (MT) switching. Mutations in swi8 confer a general mutator phenotype and, in particular, generate specific mutations in the MT region. Sequencing of the MT cassettes of the h90 swi8-137 mutan...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Fleck O,Rudolph C,Albrecht A,Lorentz A,Schär P,Schmidt H

    更新日期:1994-11-01 00:00:00

  • A Bayesian Approach to Inferring Rates of Selfing and Locus-Specific Mutation.

    abstract::We present a Bayesian method for characterizing the mating system of populations reproducing through a mixture of self-fertilization and random outcrossing. Our method uses patterns of genetic variation across the genome as a basis for inference about reproduction under pure hermaphroditism, gynodioecy, and a model de...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.115.179093

    authors: Redelings BD,Kumagai S,Tatarenkov A,Wang L,Sakai AK,Weller SG,Culley TM,Avise JC,Uyenoyama MK

    更新日期:2015-11-01 00:00:00

  • Isolation and characterization of PEP5, a gene essential for vacuolar biogenesis in Saccharomyces cerevisiae.

    abstract::pep5 mutants of Saccharomyces cerevisiae accumulate inactive precursors to the vacuolar hydrolases. The PEP5 gene was isolated from a genomic DNA library by complementation of the pep5-8 mutation. Deletion analysis localized the complementing activity to a 3.3-kb DNA fragment. DNA sequence analysis of the PEP5 gene re...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Woolford CA,Dixon CK,Manolson MF,Wright R,Jones EW

    更新日期:1990-08-01 00:00:00