Toward the therapeutic editing of mutated RNA sequences.

Abstract:

:If RNA editing could be rationally directed to mutated RNA sequences, genetic diseases caused by certain base substitutions could be treated. Here we use a synthetic complementary RNA oligonucleotide to direct the correction of a premature stop codon mutation in dystrophin RNA. The complementary RNA oligonucleotide was hybridized to a premature stop codon and the hybrid was treated with nuclear extracts containing the cellular enzyme double-stranded RNA adenosine deaminase. When the treated RNAs were translated in vitro, a dramatic increase in expression of a downstream luciferase coding region was observed. The cDNA sequence data are consistent with deamination of the adenosine in the UAG stop codon to inosine by double-stranded RNA adenosine deaminase. Injection of oligonucleotide-mRNA hybrids into Xenopus embryos also resulted in an increase in luciferase expression. These experiments demonstrate the principle of therapeutic RNA editing.

authors

Woolf TM,Chase JM,Stinchcomb DT

doi

10.1073/pnas.92.18.8298

subject

Has Abstract

pub_date

1995-08-29 00:00:00

pages

8298-302

issue

18

eissn

0027-8424

issn

1091-6490

journal_volume

92

pub_type

杂志文章
  • Probe mapping to facilitate transposon-based DNA sequencing.

    abstract::A promising strategy for DNA sequencing exploits transposons to provide mobile sites for the binding of sequencing primers. For such a strategy to be maximally efficient, the location and orientation of the transposon must be readily determined and the insertion sites should be randomly distributed. We demonstrate an ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.87.16.6213

    authors: Strausbaugh LD,Bourke MT,Sommer MT,Coon ME,Berg CM

    更新日期:1990-08-01 00:00:00

  • Growth of transplanted tails of infant rats in adolescent allogeneic recipients.

    abstract::The tails of newborn rats, consisting of slender continuous cones of avascular cartilage, were transplanted in subcutaneous spaces of allogeneic adolescents; colloidal carbon was injected in a vein before the transplants were harvested on days 7-28. Between 97 and 100% of the transplants were accepted, underwent diffe...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.73.9.3283

    authors: Huggins CB,Anderson KP

    更新日期:1976-09-01 00:00:00

  • Self-amplifying autocrine actions of BDNF in axon development.

    abstract::A critical step in neuronal development is the formation of axon/dendrite polarity, a process involving symmetry breaking in the newborn neuron. Local self-amplifying processes could enhance and stabilize the initial asymmetry in the distribution of axon/dendrite determinants, but the identity of these processes remai...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1115907108

    authors: Cheng PL,Song AH,Wong YH,Wang S,Zhang X,Poo MM

    更新日期:2011-11-08 00:00:00

  • Carbonic anhydrase inhibitor suppresses invasion of renal cancer cells in vitro.

    abstract::Acidification of the extracellular milieu of malignant tumors is reported to increase the invasive behavior of cancer cells. In normal tissues, production of acid is catalyzed by carbonic anhydrases (CAs), some of which are known to be overexpressed in certain cancers. To investigate the functional role of CA activity...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.040554897

    authors: Parkkila S,Rajaniemi H,Parkkila AK,Kivela J,Waheed A,Pastorekova S,Pastorek J,Sly WS

    更新日期:2000-02-29 00:00:00

  • Galaxy clustering on large scales.

    abstract::I describe some recent observations of large-scale structure in the galaxy distribution. The best constraints come from two-dimensional galaxy surveys and studies of angular correlation functions. Results from galaxy redshift surveys are much less precise but are consistent with the angular correlations, provided the ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.90.11.4859

    authors: Efstathiou G

    更新日期:1993-06-01 00:00:00

  • Rewriting nature's assembly manual for a ssRNA virus.

    abstract::Satellite tobacco necrosis virus (STNV) is one of the smallest viruses known. Its genome encodes only its coat protein (CP) subunit, relying on the polymerase of its helper virus TNV for replication. The genome has been shown to contain a cryptic set of dispersed assembly signals in the form of stem-loops that each pr...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1706951114

    authors: Patel N,Wroblewski E,Leonov G,Phillips SEV,Tuma R,Twarock R,Stockley PG

    更新日期:2017-11-14 00:00:00

  • Refinement of the X-ray Structure of Rubredoxin by Conformational Energy Calculations.

    abstract::The x-ray structure of rubredoxin has been refined by energy minimization. The computed structure is constrained to have standard bond lengths, bond angles, and planar trans peptide groups. Also, since most of the steric overlaps have been relieved, it has a very low energy. As judged by the root mean square (RMS) dev...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.71.9.3736

    authors: Rasse D,Warme PK,Scheraga HA

    更新日期:1974-09-01 00:00:00

  • Inflammation-dependent secretion and splicing of IL-32{gamma} in rheumatoid arthritis.

    abstract::Different splice variants of the proinflammatory cytokine IL-32 are found in various tissues; their putative differences in biological function remain unknown. In the present study, we report that IL-32γ is the most active isoform of the cytokine. Splicing to one less active IL-32β appears to be a salvage mechanism to...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1016005108

    authors: Heinhuis B,Koenders MI,van de Loo FA,Netea MG,van den Berg WB,Joosten LA

    更新日期:2011-03-22 00:00:00

  • Kinetics of force generation by single kinesin molecules activated by laser photolysis of caged ATP.

    abstract::To relate transients of force by single kinesin molecules with the elementary steps of the ATPase cycle, we measured the time to force generation by kinesin after photorelease of ATP from caged ATP. Kinesin-coated beads were trapped by an infrared laser and brought onto microtubules fixed to a coverslip. Tension was a...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.94.9.4395

    authors: Higuchi H,Muto E,Inoue Y,Yanagida T

    更新日期:1997-04-29 00:00:00

  • Vitamin C pharmacokinetics in healthy volunteers: evidence for a recommended dietary allowance.

    abstract::Determinants of the recommended dietary allowance (RDA) for vitamin C include the relationship between vitamin C dose and steady-state plasma concentration, bioavailability, urinary excretion, cell concentration, and potential adverse effects. Because current data are inadequate, an in-hospital depletion-repletion stu...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 临床试验,杂志文章

    doi:10.1073/pnas.93.8.3704

    authors: Levine M,Conry-Cantilena C,Wang Y,Welch RW,Washko PW,Dhariwal KR,Park JB,Lazarev A,Graumlich JF,King J,Cantilena LR

    更新日期:1996-04-16 00:00:00

  • HLA class I and II antigens are partially co-clustered in the plasma membrane of human lymphoblastoid cells.

    abstract::Major histocompatibility complex (MHC) class II molecules displayed clustered patterns at the surfaces of T (HUT-102B2) and B (JY) lymphoma cells characterized by interreceptor distances in the micrometer range as detected by scanning force microscopy of immunogold-labeled antigens. Electron microscopy revealed that a...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.94.14.7269

    authors: Jenei A,Varga S,Bene L,Mátyus L,Bodnár A,Bacsó Z,Pieri C,Gáspár R Jr,Farkas T,Damjanovich S

    更新日期:1997-07-08 00:00:00

  • Industrial emissions cause extreme urban ozone diurnal variability.

    abstract::Simulations with a regional chemical transport model show that anthropogenic emissions of volatile organic compounds and nitrogen oxides (NO(x) = NO + NO(2)) lead to a dramatic diurnal variation of surface ozone (O(3)) in Houston, Texas. During the daytime, photochemical oxidation of volatile organic compounds catalyz...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0401484101

    authors: Zhang R,Lei W,Tie X,Hess P

    更新日期:2004-04-27 00:00:00

  • A naturally occurring insertion of a single amino acid rewires transcriptional regulation by glucocorticoid receptor isoforms.

    abstract::In addition to guiding proteins to defined genomic loci, DNA can act as an allosteric ligand that influences protein structure and activity. Here we compared genome-wide binding, transcriptional regulation, and, using NMR, the conformation of two glucocorticoid receptor (GR) isoforms that differ by a single amino acid...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1316235110

    authors: Thomas-Chollier M,Watson LC,Cooper SB,Pufall MA,Liu JS,Borzym K,Vingron M,Yamamoto KR,Meijsing SH

    更新日期:2013-10-29 00:00:00

  • Shear-induced reorganization of renal proximal tubule cell actin cytoskeleton and apical junctional complexes.

    abstract::In this study, we demonstrate that fluid shear stress (FSS)-induced actin cytoskeletal reorganization and junctional formation in renal epithelial cells are nearly completely opposite the corresponding changes in vascular endothelial cells (ECs) [Thi MM et al. (2004) Proc Natl Acad Sci USA 101:16483-16488]. Mouse prox...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0804954105

    authors: Duan Y,Gotoh N,Yan Q,Du Z,Weinstein AM,Wang T,Weinbaum S

    更新日期:2008-08-12 00:00:00

  • Neoantigens of the membrane attack complex of human complement.

    abstract::The membrane attack complex of complement is a fusion product of five complement proteins: C5b, C6, C7, C8, and C9. The complex causes complement-dependent cell membrane damage. It is assembled following complement activation both on the target cell surface and in the fluid phase. The isolated soluble complex, which h...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.72.5.1687

    authors: Kolb WP,Müller-Eberhard HJ

    更新日期:1975-05-01 00:00:00

  • Alpine ice evidence of a three-fold increase in atmospheric iodine deposition since 1950 in Europe due to increasing oceanic emissions.

    abstract::Iodine is an important nutrient and a significant sink of tropospheric ozone, a climate-forcing gas and air pollutant. Ozone interacts with seawater iodide, leading to volatile inorganic iodine release that likely represents the largest source of atmospheric iodine. Increasing ozone concentrations since the preindustr...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1809867115

    authors: Legrand M,McConnell JR,Preunkert S,Arienzo M,Chellman N,Gleason K,Sherwen T,Evans MJ,Carpenter LJ

    更新日期:2018-11-27 00:00:00

  • Alcohol action on a neuronal membrane receptor: evidence for a direct interaction with the receptor protein.

    abstract::For almost a century, alcohols have been thought to produce their effects by actions on the membrane lipids of central nervous system neurons--the well known "lipid theory" of alcohol action. The rationale for this theory is the correlation of potency with oil/water or membrane/buffer partition coefficient. Although a...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.91.17.8200

    authors: Li C,Peoples RW,Weight FF

    更新日期:1994-08-16 00:00:00

  • Redox dysregulation as a link between childhood trauma and psychopathological and neurocognitive profile in patients with early psychosis.

    abstract::Exposure to childhood trauma (CT) increases the risk for psychosis and affects the development of brain structures, possibly through oxidative stress. As oxidative stress is also linked to psychosis, it may interact with CT, leading to a more severe clinical phenotype. In 133 patients with early psychosis (EPP), we ex...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1812821115

    authors: Alameda L,Fournier M,Khadimallah I,Griffa A,Cleusix M,Jenni R,Ferrari C,Klauser P,Baumann PS,Cuenod M,Hagmann P,Conus P,Do KQ

    更新日期:2018-12-04 00:00:00

  • Coalescence and genetic diversity in sexual populations under selection.

    abstract::In sexual populations, selection operates neither on the whole genome, which is repeatedly taken apart and reassembled by recombination, nor on individual alleles that are tightly linked to the chromosomal neighborhood. The resulting interference between linked alleles reduces the efficiency of selection and distorts ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1309697110

    authors: Neher RA,Kessinger TA,Shraiman BI

    更新日期:2013-09-24 00:00:00

  • Repurposing a peptide toxin from wasp venom into antiinfectives with dual antimicrobial and immunomodulatory properties.

    abstract::Novel antibiotics are urgently needed to combat multidrug-resistant pathogens. Venoms represent previously untapped sources of novel drugs. Here we repurposed mastoparan-L, the toxic active principle derived from the venom of the wasp Vespula lewisii, into synthetic antimicrobials. We engineered within its N terminus ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.2012379117

    authors: Silva ON,Torres MDT,Cao J,Alves ESF,Rodrigues LV,Resende JM,Lião LM,Porto WF,Fensterseifer ICM,Lu TK,Franco OL,de la Fuente-Nunez C

    更新日期:2020-10-27 00:00:00

  • Exit from G0 and entry into the cell cycle of cells expressing p21Sdi1 antisense RNA.

    abstract::p21Sdi1 (also known as Cip1 and Waf1), an inhibitor of DNA synthesis cloned from senescent human fibroblasts, is an inhibitor of G1 cyclin-dependent kinases (Cdks) in vitro and is transcriptionally regulated by wild-type p53. In addition, p21Sdi1 has been found to inhibit DNA replication by direct interaction with pro...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.92.10.4352

    authors: Nakanishi M,Adami GR,Robetorye RS,Noda A,Venable SF,Dimitrov D,Pereira-Smith OM,Smith JR

    更新日期:1995-05-09 00:00:00

  • Stochastic model of protein-protein interaction: why signaling proteins need to be colocalized.

    abstract::Colocalization of proteins that are part of the same signal transduction pathway via compartmentalization, scaffold, or anchor proteins is an essential aspect of the signal transduction system in eukaryotic cells. If interaction must occur via free diffusion, then the spatial separation between the sources of the two ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0401314101

    authors: Batada NN,Shepp LA,Siegmund DO

    更新日期:2004-04-27 00:00:00

  • Negative regulation of Toll-like receptor 4 signaling by IL-10-dependent microRNA-146b.

    abstract::Toll-like receptors (TLRs) play key roles in detecting pathogens and initiating inflammatory responses that, subsequently, prime specific adaptive responses. Several mechanisms control TLR activity to avoid excessive inflammation and consequent immunopathology, including the anti-inflammatory cytokine IL-10. Recently,...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1219852110

    authors: Curtale G,Mirolo M,Renzi TA,Rossato M,Bazzoni F,Locati M

    更新日期:2013-07-09 00:00:00

  • Hatchling turtles survive freezing during winter hibernation.

    abstract::Hatchlings of the painted turtle (Chrysemys picta marginata) are unique as the only reptile and highest vertebrate life form known to tolerate the natural freezing of extracellular body fluids during winter hibernation. Turtles survived frequent exposures to temperatures as low as -6 degrees C to -8 degrees C in their...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.85.21.8350

    authors: Storey KB,Storey JM,Brooks SP,Churchill TA,Brooks RJ

    更新日期:1988-11-01 00:00:00

  • The beta subunit of the high-conductance calcium-activated potassium channel contributes to the high-affinity receptor for charybdotoxin.

    abstract::Transient expression of either alpha or alpha + beta subunits of the high-conductance Ca2+-activated K+ (maxi-K) channel has been achieved in COS-1 cells. Expression has been studied using charybdotoxin (ChTX), a peptidyl inhibitor that binds in the pore on the alpha subunit. Although some properties of monoiodotyrosi...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.94.7.2853

    authors: Hanner M,Schmalhofer WA,Munujos P,Knaus HG,Kaczorowski GJ,Garcia ML

    更新日期:1997-04-01 00:00:00

  • ATF6alpha-Rheb-mTOR signaling promotes survival of dormant tumor cells in vivo.

    abstract::The pathways that allow quiescent disseminated cancer cells to survive during prolonged dormancy periods are unknown. Here, we identify the transcription factor ATF6alpha as a pivotal survival factor for quiescent but not proliferative squamous carcinoma cells. ATF6alpha is essential for the adaptation of dormant cell...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0800939105

    authors: Schewe DM,Aguirre-Ghiso JA

    更新日期:2008-07-29 00:00:00

  • Snapshot of a phosphorylated substrate intermediate by kinetic crystallography.

    abstract::The ATP-dependent enzyme dethiobiotin synthetase from Escherichia coli catalyses the formation of dethiobiotin from CO2 and 7, 8-diaminopelargonic acid. The reaction is initiated by the formation of a carbamate and proceeds through a phosphorylated intermediate, a mixed carbamic phosphoric anhydride. Here, we report t...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.95.10.5495

    authors: Käck H,Gibson KJ,Lindqvist Y,Schneider G

    更新日期:1998-05-12 00:00:00

  • Genetic structure of forensic populations.

    abstract::DNA-based identification depends on the probability that two different individuals have the same phenotype, which is given by kinship theory. Together with the large and consistent body of evidence on human population structure, kinship theory provides a sound basis for forensic use of DNA markers. ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.89.7.2556

    authors: Morton NE

    更新日期:1992-04-01 00:00:00

  • Dynamic updating of hippocampal object representations reflects new conceptual knowledge.

    abstract::Concepts organize the relationship among individual stimuli or events by highlighting shared features. Often, new goals require updating conceptual knowledge to reflect relationships based on different goal-relevant features. Here, our aim is to determine how hippocampal (HPC) object representations are organized and ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1614048113

    authors: Mack ML,Love BC,Preston AR

    更新日期:2016-11-15 00:00:00

  • Turbulent diffusion phase transition is due to singular energy spectrum.

    abstract::The phase transition for turbulent diffusion, reported by Avellaneda and Majda [Avellaneda, M. & Majda, A. J. (1994) Philos. Trans. R. Soc. London A 346, 205-233, and several earlier papers], is traced to a modeling assumption in which the energy spectrum of the turbulent fluid is singularly dependent on the viscosity...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.92.24.11005

    authors: Wallstrom TC

    更新日期:1995-11-21 00:00:00