Studies on the physicochemical structure and stability of an active fragment (T2A) of colicin E3.

Abstract:

:The physicochemical nature of an active fragment (T2A) of colicin E3 was examined together with those of its specific inhibitor, B, and the T2A-B complex under various conditions by means of CD and fluorescence spectroscopy. 1. T2A was mainly composed of unordered structure, although the molecule was folded into a rather compact structure, probably by beta-turns and ionic interactions. 2. The structure of T2A was not stable, and unfolding of the molecule was observed on treatments with acid, alkali, heat, guanidine hydrochloride, and detergents. However, once denaturing conditions were removed, the unfolded T2A molecule quickly regained the native conformation, recovering its full activity. 3. Formation of a one-to-one compex of T2A and B was confirmed. No gross conformational changes in T2A and B were found upon formation of the T2A-B complex. 4. A mechanism of dissociation of colicin E3 and A and B, or of T2A-B into T2A and B, during passage through the membrane of colicin E3-infected cells is proposed, based mainly on the results obtained here.

journal_name

J Biochem

journal_title

Journal of biochemistry

authors

Suzuki K,Ohno S,Imahori K

doi

10.1093/oxfordjournals.jbchem.a132805

subject

Has Abstract

pub_date

1980-03-01 00:00:00

pages

761-9

issue

3

eissn

0021-924X

issn

1756-2651

journal_volume

87

pub_type

杂志文章
  • Fluorometric studies on the light chains of skeletal muscle myosin. III. Effect of Ca2+ on the reactivity of two SH groups of DTNB light chain in myosin and in the isolated state.

    abstract::We studied the effect of Ca2+ on the reactivities of two SH groups of DTNB light chain (Cys 128 and Cys 157) using a fluorogenic thiol reagent. It was found that a Ca2+-induced change in reactivity occurred only with Cys 128 when the light chain was in an isolated state, whereas it occurred with both Cys 128 and Cys 1...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a132727

    authors: Yamamoto K,Honjo R,Sekine T

    更新日期:1980-01-01 00:00:00

  • The conformation of the lysyl side chain of substrates at the active center of trypsin.

    abstract::In order to study the conformation of the side chain of lysine substrates bound to the active center of trypsin, two lysine analogs, cis- and trans-2,6-diamino-4-hexenoic acids (4,5-dehydrolysines) were synthesized and kinetic parameters for the hydrolysis of benzoyl methyl esters and phenylthiazolones of these analog...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a121695

    authors: Mizusaki K,Sugahara Y,Tsunematsu H,Makisumi S

    更新日期:1986-07-01 00:00:00

  • Glucagon- and dibutyryl cyclic AMP-produced inhibition of cholesterol ester hydrolase in isolated rat hepatocytes: role of calcium.

    abstract::The regulation of neutral cytosolic cholesterol ester hydrolase was studied in isolated rat liver cells. Addition of glucagon to cell suspensions caused a decrease in the enzyme activity which was significant at 1 nM concentration. The cyclic nucleotide analogue bibutyryl cyclic AMP (10 and 100 microM) also inhibited ...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a123070

    authors: Ruiz MB,Ochoa B,Lacort M

    更新日期:1990-03-01 00:00:00

  • The role of thiols in the apparent activation of rat brain nitric oxide synthase (NOS).

    abstract::The role of thiols on the activation and/or stabilization of rat brain nitric oxide synthase (NOS) has been investigated. It was found that thiols are not necessary for stabilizing or protecting the protein during purification but are required during enzyme turnover for maximum activity. In the complete absence of thi...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a124797

    authors: Komori Y,Hyun J,Chiang K,Fukuto JM

    更新日期:1995-04-01 00:00:00

  • A novel adenosine triphosphatase isolated from RNA polymerase preparations of Escherichia coli. II. Enzymatic properties and molecular structure.

    abstract::An adenosinetriphosphatase (ATPase) [EC 3.6.1.3] copurified with the DNA-dependent RNA polymerase [EC 2.7.7.6] from Escherichia coli was isolated to apparent homogeneity and some of its functional as well as structural properties were examined. Although the novel ATPase exhibited metal requirements similar to those of...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a131160

    authors: Ishihama A,Ikeuchi T,Matsumoto A,Yamamoto S

    更新日期:1976-05-01 00:00:00

  • Different buffer effects in selecting HM-1 killer toxin single-chain fragment variable anti-idiotypic antibodies.

    abstract::We reported previously competitive panning elution with PBS (pH 7.0) that contains HM-1 killer toxin (HM-1) and Candida albicans membrane fraction (CaMF) to release phages bound with CaMF as an antigen. Here, as an alternative strategy, we isolated high-binding affinity recombinant single-chain fragment variables (scF...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/jb/mvq006

    authors: Krishnaswamy S,Kabir ME,Miyamoto M,Furuichi Y,Komiyama T

    更新日期:2010-05-01 00:00:00

  • Autonomous control of the level of methylation of methyl-accepting chemotaxis protein.

    abstract::Methylation and demethylation of the methyl-accepting chemotaxis protein (MCP) was studied in vitro. The in vitro MCP methylating system showed the following characteristics. 1. Multiple bands of methylated MCP were produced. 2. The reaction could be separated into two phases: the initial phase, in which the level of ...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a133945

    authors: Hayashi H,Minoshima S,Ohba M

    更新日期:1982-08-01 00:00:00

  • Selective release of phospholipase A2 and lysophosphatidylserine-specific lysophospholipase from rat platelets.

    abstract::Rat platelets released phospholipase A2 and lysophospholipase upon activation with thrombin or ADP. The release of phospholipases was energy-dependent and was not in parallel with that of a known lysosomal marker enzyme, N-acetyl-beta-D-glucosaminidase. The phospholipases are derived from other granules (dense granule...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a121907

    authors: Horigome K,Hayakawa M,Inoue K,Nojima S

    更新日期:1987-01-01 00:00:00

  • Biosynthesis of lactosylceramide and paragloboside by human lactose synthase A protein.

    abstract::Lactosylceramide and paragloboside were synthesized from their precursor glycolipids and UDP-galactose by lactose synthase A protein [UDP-Gal : GlcNAc beta-4-galactosyltransferase, EC 2.4.1.22] purified to homogeneity from human plasma. The partially purified human liver enzyme and an extract from human lymphoblastoid...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a134028

    authors: Yamato K,Yoshida A

    更新日期:1982-10-01 00:00:00

  • Regulation of activated protein C by thrombin-modified protein S.

    abstract::Protein S, a vitamin K-dependent plasma protein having Gla-residues, increases the rate of inactivation of Factor Va by activated protein C by enhancing the binding of activated protein C to phospholipid [Walker, J.F. (1981) J. Biol. Chem. 256, 11128-11131]. The present study aimed at elucidating the effect of thrombi...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a134409

    authors: Suzuki K,Nishioka J,Hashimoto S

    更新日期:1983-09-01 00:00:00

  • Muscarinic acetylcholine receptors stimulate Ca2+ influx in PC12D cells predominantly via activation of Ca2+ store-operated channels.

    abstract::Activation of muscarinic acetylcholine receptors (mAChRs) causes the rapid release of Ca2+ from intracellular stores and a sustained influx of external Ca2+ in PC12D cells, a subline of the widely studied cell line PC12. Release of Ca2+ from intracellular stores and a sustained influx of Ca2+ are also observed followi...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/jb/mvj064

    authors: Ebihara T,Guo F,Zhang L,Kim JY,Saffen D

    更新日期:2006-03-01 00:00:00

  • Alkaline proteinase E of Streptomyces griseus K-1.

    abstract::A fifth and new DFP-sensitive alkaline proteinase E, with strong esterase activity toward Ac-(Ala)3-OMe was found in pronase, a protease mixture from St. griseus K-1. Proteinase E was shown to be different from the elastase [EC 3.4.21.11]-like enzyme or subtilisin [EC 3.4.21.14]like enzyme, and alkaline proteinase A, ...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a131153

    authors: Narahashi Y,Yoda K

    更新日期:1976-05-01 00:00:00

  • Stable expression of gastric proton pump activity at the cell surface.

    abstract::Stable cell lines expressing the gastric proton pump alpha- and/or beta-subunits were constructed. The cell line co-expressing the alpha- and beta-subunits showed inward Rb(+) transport, which was activated by Rb(+) in a concentration-dependent manner. In the alpha+beta-expressing cell line, rapid recovery of intracel...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a003183

    authors: Kimura T,Yoshida A,Tabuchi Y,Ikari A,Takeguchi N,Asano S

    更新日期:2002-06-01 00:00:00

  • Frequent fusion of liposomes to a positively charged planar bilayer without calcium ions.

    abstract::A novel positively charged planar bilayer membrane was formed from a mixture containing 20% cationic lipid, 1,2-dioleoyloxy-3-(trimethylammonio)propane, and neutral phospholipid mixture of 56% phosphatidylethanolamine and 24% egg phosphatidylcholine. The basic properties of the bilayer were essentially the same as tho...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a124204

    authors: Anzai K,Masumi M,Kawasaki K,Kirino Y

    更新日期:1993-10-01 00:00:00

  • Procedures and conditions for application of the pyridine hemochrome method to photosynthetically grown cells of Rhodopseudomonas sphaeroides.

    abstract::The conditions and pretreatments required in the conventional pyridine hemochrome method were re-examined for application of the method to the measurement of protoheme and heme c contents in photosynthetically grown cells of Rhodopseudomonas sphaeroides. The amounts of hemes were calculated from two kinds of differenc...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a133344

    authors: Takaichi S,Morita S

    更新日期:1981-05-01 00:00:00

  • Genetic regulation of GM2 expression in liver of mouse.

    abstract::GM2 containing NeuGc was found to be a major ganglioside in the liver of most inbred strains of mouse we have examined so far. They were DBA/2, C3H/He, C57BL/6, BALB/c, and CBA mice. However, WHT/Ht mouse does not contain a detectable amount of GM2 (NeuGc) but has GM3 containing NeuGc as the major ganglioside in the l...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/jb/93.3.895

    authors: Hashimoto Y,Otsuka H,Sudo K,Suzuki K,Suzuki A,Yamakawa T

    更新日期:1983-03-01 00:00:00

  • Specific efflux of glutathione from the basolateral membrane domain in polarized MDCK cells during ricin-induced apoptosis.

    abstract::Although the depletion of reduced glutathione (GSH) has been observed in a variety of apoptotic systems, little is known about the mechanism of GSH depletion. In this study we used polarized MDCK cells to study the GSH flux during ricin-induced apoptosis. Here we report that the specific accumulation of GSH occurred i...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a022508

    authors: Oda T,Sadakata N,Komatsu N,Muramatsu T

    更新日期:1999-10-01 00:00:00

  • Chicken ornithine transcarbamylase gene, structure, regulation, and chromosomal assignment: repetitive sequence motif in intron 3 regulates this enzyme activity.

    abstract::Ornithine transcarbamylase (OTC) is one of the urea cycle enzymes. While the chicken is a uricotelic animal, it has measurable OTC activity in its kidney. OTC activity is highly variable within and between chicken breeds. Chicken OTC may have some physiological significance because of its significant activity in the k...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a022214

    authors: Shimogiri T,Kono M,Mannen H,Mizutani M,Tsuji S

    更新日期:1998-11-01 00:00:00

  • The first molecular evidence that autophagy relates rimmed vacuole formation in chloroquine myopathy.

    abstract::Chloroquine myopathy is a drug poisoning disease involving rimmed vacuole formation. By Western blot analysis, we investigated posttranslational modification of LC3 in cultured cells with a high concentration of chloroquine, and found that the autophagosome membrane-bound form of LC3 increased dose-dependently. We als...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a003147

    authors: Suzuki T,Nakagawa M,Yoshikawa A,Sasagawa N,Yoshimori T,Ohsumi Y,Nishino I,Ishiura S,Nonaka I

    更新日期:2002-05-01 00:00:00

  • Conformation and template activity of human reovirus genome RNA.

    abstract::In vitro activation of human reovirus transcriptase by alpha-chymotrypsin digestion of viral outer shell proteins was completely dependent on the ionic size of the monovalent cation in the medium. Cations with nonhydrated ionic radii larger than 1.3 A showed full potency of activation of chymotrypsin digestion, and pr...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a134657

    authors: Nagai J,Tanaka M,Nakashima K

    更新日期:1984-03-01 00:00:00

  • Measurement of activities of human serum sulfotransferases which transfer sulfate to the galactose residues of keratan sulfate and to the nonreducing end N-acetylglucosamine residues of N-acetyllactosamine trisaccharide: comparison between normal controls

    abstract::Human serum sulfotransferase activities were measured in normal controls and patients with macular corneal dystrophy (MCD), an inherited disorder characterized by the decreased sulfation of keratan sulfate in the corneal stroma and serum, using two kinds of acceptor: partially desulfated keratan sulfate and a trisacch...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a022280

    authors: Hasegawa N,Torii T,Nagaoka I,Nakayasu K,Miyajima H,Habuchi O

    更新日期:1999-02-01 00:00:00

  • Isolation of N omega-phosphoarginine hydrolase from rat liver and its physical properties.

    abstract::N omega-Phosphoarginine hydrolase from rat liver cytosol was purified to apparent homogeneity on SDS-PAGE, by employing column chromatographies on Sephadex G-75, DEAE-cellulose, QAE-Toyopearl, and glutathione-2-pyridyl-disulfide-Superose. One milligram protein of the final preparation released 4 mumol/min of inorganic...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a124032

    authors: Yokoyama K,Ohmori H,Kumon A

    更新日期:1993-02-01 00:00:00

  • Ca2+-binding of S-100 protein in the presence of K+ and Mg2+.

    abstract::Ca2+-binding of S-100 protein was studied using a Ca2+ electrode at pH 6.80. In the presence of 0.1 M KCl and 10 mM MgCl2 (ionic strength 0.13), Ca2+-binding to S-100 protein occurred in three steps with positive cooperativity. The numbers of bound Ca2+ ions in the three steps were 2, 2, and 4. The Ca2+-binding consta...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a122596

    authors: Matsuda S

    更新日期:1988-12-01 00:00:00

  • Connectin, an elastic protein of muscle. A connectin-like protein from the plasmodium Physarum polycephalum.

    abstract::A completely sodium dodecyl sulfate-insoluble protein was obtained from plasmodia of Physarum polycephalum. The amino acid composition of this protein was very similar to that of connectin, an elastic protein of muscle. When the protein suspension was treated with 6 M guanidine-HCl in the presence of 0.1 M 2-mercaptoe...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a133043

    authors: Ozaki K,Maruyama K

    更新日期:1980-09-01 00:00:00

  • Origin and early evolution of transition element enzymes.

    abstract::In this paper we speculate on the origin and early evolution of transition element enzymes. Iron, molybdenum, and zinc, the most abundant transition elements in seawater, presumably complexed with compounds accumulated in the primeval sea in the course of chemical evolution forming compounds with subsequently evolved ...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:

    authors: Egami F

    更新日期:1975-06-01 00:00:00

  • Kinetic specificities of BPN' and Carlsberg subtilisins. Mapping the aromatic binding site.

    abstract::The kinetic specificities of BPN' and Carlsberg subtilisins [EC 3.4.21.14] were examined with various nucleus-substituted derivatives of Nalpha-acetylated aromatic amino acid methyl esters for mapping their hydrophobic binding sites in comparison with that of alpha-chymotrypsin. The Carlsberg enzyme was generally much...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a132157

    authors: Karasaki Y,Ohno M

    更新日期:1978-09-01 00:00:00

  • A novel metalloprotease from Gloydius halys venom induces endothelial cell apoptosis through its protease and disintegrin-like domains.

    abstract::A novel hemorrhagic metalloprotease, halysase, isolated from the snake venom of Gloydius halys induces apoptosis in endothelial cells. The purified metalloprotease is a monomeric glycoprotein with an isoelectric point of 4.8. Analysis of the cDNA sequence encoding halysase revealed that the enzyme consists of multifun...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/jb/mvg202

    authors: You WK,Seo HJ,Chung KH,Kim DS

    更新日期:2003-11-01 00:00:00

  • Hepatocyte growth factor suppresses the onset of liver cirrhosis and abrogates lethal hepatic dysfunction in rats.

    abstract::Heptic fibrosis/cirrhosis is a common hepatic disease characterized by the hyper-accumulation of connective tissue components, and hepatic necrosis. Chronic alcohol ingestion, viral infection, and metabolic disorders are contributing factors and there has been no effective treatment. Hepatocyte growth factor (HGF), or...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a124958

    authors: Matsuda Y,Matsumoto K,Ichida T,Nakamura T

    更新日期:1995-09-01 00:00:00

  • Two distinct leukotriene B4 receptors, BLT1 and BLT2.

    abstract::Leukotriene B4 (LTB4) is a potent inflammatory mediator derived from arachidonic acid. Two G protein-coupled receptors for LTB4 have been identified: a high-affinity receptor, BLT1, and a low-affinity receptor, BLT2. Both receptors mainly couple to pertussis toxin-sensitive Gi-like G proteins and induce cell migration...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/jb/mvu078

    authors: Yokomizo T

    更新日期:2015-02-01 00:00:00

  • A survey of genes expressed in undifferentiated mouse embryonal carcinoma F9 cells: characterization of low-abundance mRNAs.

    abstract::As a first step to catalogue mRNAs present in mouse embryonal carcinoma F9 cells, 879 clones corresponding to low-abundance mRNAs were selected from among 2,896 randomly picked up clones of undifferentiated F9 cDNA libraries, using DNA probes complementary to poly(A)+RNAs prepared from undifferentiated F9 cells and to...

    journal_title:Journal of biochemistry

    pub_type: 杂志文章

    doi:10.1093/oxfordjournals.jbchem.a124485

    authors: Nishiguchi S,Joh T,Horie K,Zou Z,Yasunaga T,Shimada K

    更新日期:1994-07-01 00:00:00