Processing of the 5' end of Escherichia coli 16S ribosomal RNA.

Abstract:

:We have isolated and partially characterized an endonuclease involved in processing the 5' end of 16S rRNA of Escherichia coli. A mutant strain that is deficient in this enzyme accumulates a new precursor of 16S rRNA, named 16.3S rRNA. This rRNA has the 3' end of mature 16S rRNA but is about 60 nucleotides longer at the 5' end. In vitro, the enzyme preparation cleaves an RNA fragment of about 60 nucleotides from the 5' end of 16.3S rRNA in 30S ribosomal subunits, yielding the mature 5' end of 16S rRNA. In the mutant strain the 16.3S rRNA is associated with a full complement of 21 ribosomal proteins in 30S subunits. These particles, which comprise 50% of the total 30S subunits, are present on polyribosomes.

authors

Dahlberg AE,Dahlberg JE,Lund E,Tokimatsu H,Rabson AB,Calvert PC,Reynolds F,Zahalak M

doi

10.1073/pnas.75.8.3598

subject

Has Abstract

pub_date

1978-08-01 00:00:00

pages

3598-602

issue

8

eissn

0027-8424

issn

1091-6490

journal_volume

75

pub_type

杂志文章
  • Comprehensive copy number and gene expression profiling of the 17q23 amplicon in human breast cancer.

    abstract::The biological significance of DNA amplification in cancer is thought to be due to the selection of increased expression of a single or few important genes. However, systematic surveys of the copy number and expression of all genes within an amplified region of the genome have not been performed. Here we have used a c...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.091582298

    authors: Monni O,Barlund M,Mousses S,Kononen J,Sauter G,Heiskanen M,Paavola P,Avela K,Chen Y,Bittner ML,Kallioniemi A

    更新日期:2001-05-08 00:00:00

  • Regulation of phenotypic variability by a threshold-based mechanism underlies bacterial persistence.

    abstract::In the face of antibiotics, bacterial populations avoid extinction by harboring a subpopulation of dormant cells that are largely drug insensitive. This phenomenon, termed "persistence," is a major obstacle for the treatment of a number of infectious diseases. The mechanism that generates both actively growing as well...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1004333107

    authors: Rotem E,Loinger A,Ronin I,Levin-Reisman I,Gabay C,Shoresh N,Biham O,Balaban NQ

    更新日期:2010-07-13 00:00:00

  • Inhibitors of Ras/Raf-1 interaction identified by two-hybrid screening revert Ras-dependent transformation phenotypes in human cancer cells.

    abstract::The interaction of activated Ras with Raf initiates signaling cascades that contribute to a significant percentage of human tumors, suggesting that agents that specifically disrupt this interaction might have desirable chemotherapeutic properties. We used a subtractive forward two-hybrid approach to identify small mol...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.222222699

    authors: Kato-Stankiewicz J,Hakimi I,Zhi G,Zhang J,Serebriiskii I,Guo L,Edamatsu H,Koide H,Menon S,Eckl R,Sakamuri S,Lu Y,Chen QZ,Agarwal S,Baumbach WR,Golemis EA,Tamanoi F,Khazak V

    更新日期:2002-10-29 00:00:00

  • Host-gene control of type-C RNA tumor virus expression and tumorigenesis in inbred mice.

    abstract::We analyzed the relationship of genetic factors determining the expression of endogenous type-C RNA tumor viruses and other host-gene markers to tumorigenesis. A hybridization experiment was performed with mice of strains AKR/J and C57L, the first filial (F(1)) generation hybrids, the second filial (F(2)) generation h...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.70.5.1450

    authors: Meier H,Taylor BA,Cherry M,Buebner RJ

    更新日期:1973-05-01 00:00:00

  • Physiologically relevant and portable tandem ubiquitin-binding domain stabilizes polyubiquitylated proteins.

    abstract::Ubiquitylation of proteins can be a signal for a variety of cellular processes beyond the classical role in proteolysis. The different signaling functions of ubiquitylation are thought to rely on ubiquitin-binding domains (UBDs). Several distinct UBD families are known, but their functions are not understood in detail...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1010648107

    authors: Tyrrell A,Flick K,Kleiger G,Zhang H,Deshaies RJ,Kaiser P

    更新日期:2010-11-16 00:00:00

  • Heterozygous alpha 2A-adrenergic receptor mice unveil unique therapeutic benefits of partial agonists.

    abstract::Genetic manipulation of the alpha(2A)-adrenergic receptor (alpha(2A)-AR) in mice has revealed the role of this subtype in numerous responses, including agonist-induced hypotension and sedation. Unexpectedly, alpha(2)-agonist treatment of mice heterozygous for the alpha(2A)-AR (alpha(2A)-AR(+/-)) lowers blood pressure ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.122368499

    authors: Tan CM,Wilson MH,MacMillan LB,Kobilka BK,Limbird LE

    更新日期:2002-09-17 00:00:00

  • Full-length axon regeneration in the adult mouse optic nerve and partial recovery of simple visual behaviors.

    abstract::The mature optic nerve cannot regenerate when injured, leaving victims of traumatic nerve damage or diseases such as glaucoma with irreversible visual losses. Recent studies have identified ways to stimulate retinal ganglion cells to regenerate axons part-way through the optic nerve, but it remains unknown whether mat...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1119449109

    authors: de Lima S,Koriyama Y,Kurimoto T,Oliveira JT,Yin Y,Li Y,Gilbert HY,Fagiolini M,Martinez AM,Benowitz L

    更新日期:2012-06-05 00:00:00

  • Recombinant human respiratory syncytial virus (RSV) monoclonal antibody Fab is effective therapeutically when introduced directly into the lungs of RSV-infected mice.

    abstract::Previously, recombinant human respiratory syncytial virus (RSV) monoclonal antibody Fabs were generated by antigen selection from random combinatorial libraries displayed at the tip of filamentous phage. Two such Fabs, which exhibited high binding affinity for RSV F glycoprotein (a major protective antigen), were eval...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.91.4.1386

    authors: Crowe JE Jr,Murphy BR,Chanock RM,Williamson RA,Barbas CF 3rd,Burton DR

    更新日期:1994-02-15 00:00:00

  • A signal-arrest-release sequence mediates export and control of the phage P1 endolysin.

    abstract::The Lyz endolysin of bacteriophage P1 was found to cause lysis of the host without a holin. Induction of a plasmid-cloned lyz resulted in lysis, and the lytic event could be triggered prematurely by treatments that dissipate the proton-motive force. Instead of requiring a holin, export was mediated by an N-terminal tr...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0400957101

    authors: Xu M,Struck DK,Deaton J,Wang IN,Young R

    更新日期:2004-04-27 00:00:00

  • Leptin promotes systemic lupus erythematosus by increasing autoantibody production and inhibiting immune regulation.

    abstract::Leptin is an adipocytokine that plays a key role in the modulation of immune responses and the development and maintenance of inflammation. Circulating levels of leptin are elevated in systemic lupus erythematosus (SLE) patients, but it is not clear whether this association can reflect a direct influence of leptin on ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1607101113

    authors: Lourenço EV,Liu A,Matarese G,La Cava A

    更新日期:2016-09-20 00:00:00

  • Protective immunity and eosinophilia in IgE-deficient SJA/9 mice infected with Nippostrongylus brasiliensis and Trichinella spiralis.

    abstract::To elucidate the roles of IgE antibody in host responses to helminth infection, selective IgE-deficient SJA/9 mice were infected with the nematode parasites Nippostrongylus brasiliensis, which elicits remarkable potentiated IgE production, and Trichinella spiralis, which induces strong anti-Trichinella IgE antibody pr...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.85.12.4460

    authors: Watanabe N,Katakura K,Kobayashi A,Okumura K,Ovary Z

    更新日期:1988-06-01 00:00:00

  • Vasoactive intestinal polypeptide and cholinergic mechanisms in cat nasal mucosa: studies on choline acetyltransferase and release of vasoactive intestinal polypeptide.

    abstract::Quantitative immunohistochemical analysis of the sphenopalatine ganglion in normal cats revealed that virtually all ganglion cells (98.5%) were immunoreactive to vasoactive intestinal polypeptide (VIP). After surgical removal of this ganglion, the content of both VIP and choline acetyltransferase (acetyl-CoA:choline O...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.78.8.5255

    authors: Lundberg JM,Anggård A,Emson P,Fahrenkrug J,Hökfelt T

    更新日期:1981-08-01 00:00:00

  • Activated Cdc42/Rac reconstitutes Fcepsilon RI-mediated Ca2+ mobilization and degranulation in mutant RBL mast cells.

    abstract::Antigen stimulation of mast cells via FcepsilonRI, the high-affinity receptor for IgE, triggers a signaling cascade that requires Ca(2+) mobilization for exocytosis of secretory granules during an allergic response. This study investigates critical signaling components by using mutant RBL mast cells that are defective...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.98.3.1154

    authors: Hong-Geller E,Holowka D,Siraganian RP,Baird B,Cerione RA

    更新日期:2001-01-30 00:00:00

  • A common allosteric site and mechanism in caspases.

    abstract::We present a common allosteric mechanism for control of inflammatory and apoptotic caspases. Highly specific thiol-containing inhibitors of the human inflammatory caspase-1 were identified by using disulfide trapping, a method for site-directed small-molecule discovery. These compounds became trapped by forming a disu...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0602571103

    authors: Scheer JM,Romanowski MJ,Wells JA

    更新日期:2006-05-16 00:00:00

  • A transgene insertion creating a heritable chromosome deletion mouse model of Prader-Willi and angelman syndromes.

    abstract::Prader-Willi syndrome (PWS) and Angelman syndrome (AS) result from the loss of function of imprinted genes in human chromosome 15q11-q13. The central part of mouse chromosome 7 is homologous to human 15q11-q13, with conservation of both gene order and imprinted features. We report here the characterization of a transg...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.96.16.9258

    authors: Gabriel JM,Merchant M,Ohta T,Ji Y,Caldwell RG,Ramsey MJ,Tucker JD,Longnecker R,Nicholls RD

    更新日期:1999-08-03 00:00:00

  • Hypersensitivity of Ku80-deficient cell lines and mice to DNA damage: the effects of ionizing radiation on growth, survival, and development.

    abstract::We recently have shown that mice deficient for the 86-kDa component (Ku80) of the DNA-dependent protein kinase exhibit growth retardation and a profound deficiency in V(D)J (variable, diversity, and joining) recombination. These defects may be related to abnormalities in DNA metabolism that arise from the inability of...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.94.25.13588

    authors: Nussenzweig A,Sokol K,Burgman P,Li L,Li GC

    更新日期:1997-12-09 00:00:00

  • Regulation of rat liver glutamine synthetase: activation by alpha-ketoglutarate and inhibition by glycine, alanine, and carbamyl phosphate.

    abstract::Rat liver glutamine synthetase (s(20,w) 15.0 S; MW about 352,000) resembles ovine brain glutamine synthetase in that it (a) has 8 subunits, (b) acts on both L- and D-glutamate and certain glutamate analogs (e.g., beta-glutamate, cis-cycloglutamate, and alpha-methyl-L-glutamate), and (c) is irreversibly inhibited by L-...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.68.4.781

    authors: Tate SS,Meister A

    更新日期:1971-04-01 00:00:00

  • Evidence for a chemical-thermal structure at base of mantle from sharp lateral P-wave variations beneath Central America.

    abstract::Compressional waves that sample the lowermost mantle west of Central America show a rapid change in travel times of up to 4 s over a sampling distance of 300 km and a change in waveforms. The differential travel times of the PKP waves (which traverse Earth's core) correlate remarkably well with predictions for S-wave ...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0609143103

    authors: Sun X,Song X,Zheng S,Helmberger DV

    更新日期:2007-01-02 00:00:00

  • The role of iron and copper molecules in the neuronal vulnerability of locus coeruleus and substantia nigra during aging.

    abstract::In this study, a comparative analysis of metal-related neuronal vulnerability was performed in two brainstem nuclei, the locus coeruleus (LC) and substantia nigra (SN), known targets of the etiological noxae in Parkinson's disease and related disorders. LC and SN pars compacta neurons both degenerate in Parkinson's di...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0403495101

    authors: Zecca L,Stroppolo A,Gatti A,Tampellini D,Toscani M,Gallorini M,Giaveri G,Arosio P,Santambrogio P,Fariello RG,Karatekin E,Kleinman MH,Turro N,Hornykiewicz O,Zucca FA

    更新日期:2004-06-29 00:00:00

  • Structure and developmental expression of a sea urchin fibrillar collagen gene.

    abstract::We have isolated and characterized cDNA and genomic clones that specify a Paracentrotus lividus procollagen chain. The cDNAs code for 160 uninterrupted Gly-Xaa-Yaa triplets and a 252-amino acid carboxyl propeptide. Analysis of the deduced amino acid sequences indicated that the sea urchin polypeptide exhibits structur...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.86.23.9303

    authors: D'Alessio M,Ramirez F,Suzuki HR,Solursh M,Gambino R

    更新日期:1989-12-01 00:00:00

  • Biophysical and biological activity of a synthetic 8.7-kDa hydrophobic pulmonary surfactant protein SP-B.

    abstract::We have synthesized pulmonary surfactant apoprotein SP-B peptides by solid-phase chemistry and demonstrated their ability to enhance the surface-active properties of synthetic lipid mixtures. The synthetic peptides were reactive with antiserum generated against the native bovine surfactant peptide. Both peptides confe...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.87.7.2633

    authors: Sarin VK,Gupta S,Leung TK,Taylor VE,Ohning BL,Whitsett JA,Fox JL

    更新日期:1990-04-01 00:00:00

  • NF-kappaB activation and potentiation of proinflammatory responses by the Helicobacter pylori CagA protein.

    abstract::The Helicobacter pylori immunodominant protein, CagA, is associated with severe gastritis and carcinoma. Injection of CagA into gastric epithelial cells by type IV secretion leads to actin-cytoskeletal rearrangements and cell scattering. CagA has been reported to have no role in the induction of transcription factor N...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0409873102

    authors: Brandt S,Kwok T,Hartig R,König W,Backert S

    更新日期:2005-06-28 00:00:00

  • Reconstructing the pathways of a cellular system from genome-scale signals by using matrix and tensor computations.

    abstract::We describe the use of the matrix eigenvalue decomposition (EVD) and pseudoinverse projection and a tensor higher-order EVD (HOEVD) in reconstructing the pathways that compose a cellular system from genome-scale nondirectional networks of correlations among the genes of the system. The EVD formulates a genes x genes n...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0509033102

    authors: Alter O,Golub GH

    更新日期:2005-12-06 00:00:00

  • Brain-wide genetic mapping identifies the indusium griseum as a prenatal target of pharmacologically unrelated psychostimulants.

    abstract::Psychostimulant use is an ever-increasing socioeconomic burden, including a dramatic rise during pregnancy. Nevertheless, brain-wide effects of psychostimulant exposure are incompletely understood. Here, we performed Fos-CreERT2-based activity mapping, correlated for pregnant mouse dams and their fetuses with amphetam...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1904006116

    authors: Fuzik J,Rehman S,Girach F,Miklosi AG,Korchynska S,Arque G,Romanov RA,Hanics J,Wagner L,Meletis K,Yanagawa Y,Kovacs GG,Alpár A,Hökfelt TGM,Harkany T

    更新日期:2019-12-17 00:00:00

  • The Mycobacterium tuberculosis Pup-proteasome system regulates nitrate metabolism through an essential protein quality control pathway.

    abstract::The human pathogen Mycobacterium tuberculosis encodes a proteasome that carries out regulated degradation of bacterial proteins. It has been proposed that the proteasome contributes to nitrogen metabolism in M. tuberculosis, although this hypothesis had not been tested. Upon assessing M. tuberculosis growth in several...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1819468116

    authors: Becker SH,Jastrab JB,Dhabaria A,Chaton CT,Rush JS,Korotkov KV,Ueberheide B,Darwin KH

    更新日期:2019-02-19 00:00:00

  • Mechanotransduction and strain amplification in osteocyte cell processes.

    abstract::A paradox in bone tissue is that tissue-level strains due to animal and human locomotion are too small to initiate intracellular chemical responses directly. A model recently was proposed to resolve this paradox, which predicts that the fluid flow through the pericellular matrix in the lacunar-canalicular porosity due...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.0407429101

    authors: Han Y,Cowin SC,Schaffler MB,Weinbaum S

    更新日期:2004-11-23 00:00:00

  • McClintock's challenge in the 21st century.

    abstract::In 1950, Barbara McClintock published a Classic PNAS article, "The origin and behavior of mutable loci in maize," which summarized the evidence leading to her discovery of transposition. The article described a number of genome alterations revealed through her studies of the Dissociation locus, the first mobile geneti...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 传,历史文章,杂志文章

    doi:10.1073/pnas.1215482109

    authors: Fedoroff NV

    更新日期:2012-12-11 00:00:00

  • Cofactor-specific photochemical function resolved by ultrafast spectroscopy in photosynthetic reaction center crystals.

    abstract::High-resolution mapping of cofactor-specific photochemistry in photosynthetic reaction centers (RCs) from Rhodobacter sphaeroides was achieved by polarization selective ultrafast spectroscopy in single crystals at cryogenic temperature. By exploiting the fixed orientation of cofactors within crystals, we isolated a si...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1116862109

    authors: Huang L,Ponomarenko N,Wiederrecht GP,Tiede DM

    更新日期:2012-03-27 00:00:00

  • Conformational states and recognition of amyloidogenic peptides of human insulin-degrading enzyme.

    abstract::Insulin-degrading enzyme (IDE) selectively degrades the monomer of amyloidogenic peptides and contributes to clearance of amyloid β (Aβ). Thus, IDE retards the progression of Alzheimer's disease. IDE possesses an enclosed catalytic chamber that engulfs and degrades its peptide substrates; however, the molecular mechan...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.1304575110

    authors: McCord LA,Liang WG,Dowdell E,Kalas V,Hoey RJ,Koide A,Koide S,Tang WJ

    更新日期:2013-08-20 00:00:00

  • Evolutionary origin of human and simian immunodeficiency viruses.

    abstract::From what viruses the human immunodeficiency viruses (HIVs) originated is an extremely controversial question. To address this question, we have analyzed nucleotide sequences of simian immunodeficiency viruses (SIVs) and HIVs by using the techniques for understanding molecular evolution. In particular, we compared the...

    journal_title:Proceedings of the National Academy of Sciences of the United States of America

    pub_type: 杂志文章

    doi:10.1073/pnas.87.11.4108

    authors: Gojobori T,Moriyama EN,Ina Y,Ikeo K,Miura T,Tsujimoto H,Hayami M,Yokoyama S

    更新日期:1990-06-01 00:00:00