Comparative Genome Analysis of Psychrobacillus Strain PB01, Isolated from an Iceberg.

Abstract:

:A novel psychrotolerant Psychrobacillus strain PB01, isolated from an Antarctic iceberg, was comparatively analyzed with five related strains. The complete genome of strain PB01 consists of a single circular chromosome (4.3 Mb) and a plasmid (19 Kb). As potential low-temperature adaptation strategies, strain PB01 has four genes encoding cold-shock proteins, two genes encoding DEAD-box RNA helicases, and eight genes encoding transporters for glycine betaine, which can serve as a cryoprotectant, on the genome. The pan-genome structure of the six Psychrobacillus strains suggests that strain PB01 might have evolved to adapt to extreme environments by changing its genome content to gain higher capacity for DNA repair, translation, and membrane transport. Notably, strain PB01 possesses a complete TCA cycle consisting of eight enzymes as well as three additional Helicobacter pylori-type enzymes: ferredoxin-dependent 2-oxoglutarate synthase, succinyl-CoA/acetoacetyl-CoA transferase, and malate/quinone oxidoreductase. The co-existence of the genes for TCA cycle enzymes has also been identified in the other five Psychrobacillus strains.

journal_name

J Microbiol Biotechnol

authors

Choi JY,Kim SC,Lee PC

doi

10.4014/jmb.1909.09008

subject

Has Abstract

pub_date

2020-02-28 00:00:00

pages

237-243

issue

2

eissn

1017-7825

issn

1738-8872

pii

10.4014/jmb.1909.09008

journal_volume

30

pub_type

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