A LONELY GUY protein of Bordetella pertussis with unique features is related to oxidative stress.

Abstract:

:The Gram-negative bacterium B. pertussis is the causative agent of whooping cough. This infection is re-emerging and new features related to Bordetella pathogenesis and microbiology could be relevant to defeat it. Therefore, we focused our attention on BP1253, a predicted exported protein from B. pertussis erroneously classified as lysine decarboxylase. We showed that BP1253 shares the highly conserved motif PGGxGTxxE and the key catalytic amino-acid residues with newly structurally characterized "LONELY GUY" (LOG) proteins. Biochemical studies have confirmed that this protein functions as a cytokinin-activating enzyme since it cleaves the N-glycosidic linkage between the base and the ribose, leading to the formation of free bases, which are the active form of plant hormones called cytokinins. Remarkably, BP1253 selectively binds monophosphate nucleotides such as AMP, GMP and CMP, showing a wider variety in binding capacity compared to other LOGs. Cytokinin production studies performed with B. pertussis have revealed 6-O-methylguanine to be the physiological product of BP1253 in agreement with the higher activity of the enzyme towards GMP. 6-O-methylguanine is likely to be responsible for the increased sensitivity of B. pertussis to oxidative stress. Although BP1253 has a primary sequence resembling the hexameric type-II LOGs, the dimeric state and the presence of specific amino-acids suggests that BP1253 can be classified as a novel type-II LOG. The discovery of a LOG along with its product 6-O-methylguanine in the human pathogen B. pertussis may lead to the discovery of unexplored functions of LOGs, broadening their role beyond plants.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Moramarco F,Pezzicoli A,Salvini L,Leuzzi R,Pansegrau W,Balducci E

doi

10.1038/s41598-019-53171-9

subject

Has Abstract

pub_date

2019-11-19 00:00:00

pages

17016

issue

1

issn

2045-2322

pii

10.1038/s41598-019-53171-9

journal_volume

9

pub_type

杂志文章
  • Unravelling miRNA regulation in yield of rice (Oryza sativa) based on differential network model.

    abstract::Rice (Oryza sativa L.) is one of the essential staple food crops and tillering, panicle branching and grain filling are three important traits determining the grain yield. Although miRNAs have been reported being regulating yield, no study has systematically investigated how miRNAs differentially function in high and ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-26438-w

    authors: Hu J,Zeng T,Xia Q,Qian Q,Yang C,Ding Y,Chen L,Wang W

    更新日期:2018-05-31 00:00:00

  • Long-term influence of biochar on native organic carbon mineralisation in a low-carbon clayey soil.

    abstract::Biochar can influence native soil organic carbon (SOC) mineralisation through "priming effects". However, the long-term direction, persistence and extent of SOC priming by biochar remain uncertain. Using natural (13)C abundance and under controlled laboratory conditions, we show that biochar-stimulated SOC mineralisat...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep03687

    authors: Singh BP,Cowie AL

    更新日期:2014-01-21 00:00:00

  • Stable and discriminating features are predictive of cancer presence and Gleason grade in radical prostatectomy specimens: a multi-site study.

    abstract::Site variation in fixation, staining, and scanning can confound automated tissue based image classifiers for disease characterization. In this study we incorporated stability into four feature selection methods for identifying the most robust and discriminating features for two prostate histopathology classification t...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-33026-5

    authors: Leo P,Elliott R,Shih NNC,Gupta S,Feldman M,Madabhushi A

    更新日期:2018-10-08 00:00:00

  • An engineered opsin monomer scrambles phospholipids.

    abstract::The G protein-coupled receptor opsin is a phospholipid scramblase that facilitates rapid transbilayer phospholipid exchange in liposomes. The mechanism by which opsin scrambles lipids is unknown. It has been proposed that lipid translocation may occur at protein-protein interfaces of opsin dimers. To test this possibi...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-16842-z

    authors: Pandey K,Ploier B,Goren MA,Levitz J,Khelashvili G,Menon AK

    更新日期:2017-12-01 00:00:00

  • A photometric high-throughput method for identification of electrochemically active bacteria using a WO3 nanocluster probe.

    abstract::Electrochemically active bacteria (EAB) are ubiquitous in environment and have important application in the fields of biogeochemistry, environment, microbiology and bioenergy. However, rapid and sensitive methods for EAB identification and evaluation of their extracellular electron transfer ability are still lacking. ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep01315

    authors: Yuan SJ,He H,Sheng GP,Chen JJ,Tong ZH,Cheng YY,Li WW,Lin ZQ,Zhang F,Yu HQ

    更新日期:2013-01-01 00:00:00

  • Waves spontaneously generated by heterogeneity in oscillatory media.

    abstract::Wave propagation is an important characteristic for pattern formation and pattern dynamics. To date, various waves in homogeneous media have been investigated extensively and have been understood to a great extent. However, the wave behaviors in heterogeneous media have been studied and understood much less. In this w...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep25177

    authors: Cui X,Huang X,Hu G

    更新日期:2016-05-04 00:00:00

  • Treatment of T1D via optimized expansion of antigen-specific Tregs induced by IL-2/anti-IL-2 monoclonal antibody complexes and peptide/MHC tetramers.

    abstract::Type 1 diabetes can be overcome by regulatory T cells (Treg) in NOD mice yet an efficient method to generate and maintain antigen-specific Treg is difficult to come by. Here, we devised a combination therapy of peptide/MHC tetramers and IL-2/anti-IL-2 monoclonal antibody complexes to generate antigen-specific Treg and...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-26161-6

    authors: Izquierdo C,Ortiz AZ,Presa M,Malo S,Montoya A,Garabatos N,Mora C,Verdaguer J,Stratmann T

    更新日期:2018-05-25 00:00:00

  • Antitumor activities of Liver-targeting peptide modified Recombinant human Endostatin in BALB/c-nu mice with Hepatocellular carcinoma.

    abstract::In our previous study, a liver-targeting peptide CSP I-plus modified recombinant human Endostatin (rEndostatin, endostar) (rES-CSP) was constructed and showed potent antiangiogenic capability and could specifically bind to human hepatocellular carcinoma cells to make a direct inhibition in vitro. In this study, the bi...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-14320-0

    authors: Yan M,Dongmei B,Jingjing Z,Xiaobao J,Jie W,Yan W,Jiayong Z

    更新日期:2017-10-26 00:00:00

  • Visual simulators replicate vision with multifocal lenses.

    abstract::Adaptive optics (AO) visual simulators based on deformable mirrors, spatial light modulators or optotunable lenses are increasingly used to simulate vision through different multifocal lens designs. However, the correspondence of this simulation with that obtained through real intraocular lenses (IOLs) tested on the s...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-38673-w

    authors: Vinas M,Benedi-Garcia C,Aissati S,Pascual D,Akondi V,Dorronsoro C,Marcos S

    更新日期:2019-02-07 00:00:00

  • Identification of a New Cell Population Constitutively Circulating in Healthy Conditions and Endowed with a Homing Ability Toward Injured Sites.

    abstract::Stem and progenitor cells are the critical units for tissue maintenance, regeneration, and repair. The activation of regenerative events in response to tissue injury has been correlated with mobilization of tissue-resident progenitor cells, which is functional to the wound healing process. However, until now there has...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep16574

    authors: Lo Sicco C,Tasso R,Reverberi D,Cilli M,Pfeffer U,Cancedda R

    更新日期:2015-11-12 00:00:00

  • Effects of symmetry-breaking on electromagnetic backscattering.

    abstract::Systems with a discrete rotational symmetry [Formula: see text] where [Formula: see text] that also have electromagnetic duality symmetry exhibit zero backscattering. The impact of breaking one of the two symmetries on the emerging backscattering has not yet been systematically studied. Here, we investigate the effect...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-80347-5

    authors: Abdelrahman MI,Slivina E,Rockstuhl C,Fernandez-Corbaton I

    更新日期:2021-01-18 00:00:00

  • Relationships between alpha oscillations during speech preparation and the listener N400 ERP to the produced speech.

    abstract::While previous studies separately demonstrate EEG spectral modulations during speech preparation and ERP responses to the listened speech, it is unclear whether these responses are related on a trial-by-trial basis between a speaker and listener. In order to determine whether these responses are related in real-time, ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-31038-9

    authors: Bridwell DA,Henderson S,Sorge M,Plis S,Calhoun VD

    更新日期:2018-08-27 00:00:00

  • Impact of mental disorders and chronic physical conditions on quality-adjusted life years in Singapore.

    abstract::The current study aims to evaluate the burden of disease in Singapore by estimating the quality-adjusted life years (QALYs) lost due to mental disorders and chronic physical conditions. The second Singapore Mental Health Study (SMHS-2016) was conducted in 2016 among 6126 respondents aged 18 years and above. The World ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-59604-0

    authors: Abdin E,Chong SA,Vaingankar JA,Shafie S,Verma S,Luo N,Tan KB,James L,Heng D,Subramaniam M

    更新日期:2020-02-14 00:00:00

  • Different Circulating Trace Amine Profiles in De Novo and Treated Parkinson's Disease Patients.

    abstract::Early diagnosis of Parkinson's disease (PD) remains a challenge to date. New evidence highlights the potential clinical value of circulating trace amines (TAs) in early-stage PD and their involvement in disease progression. A new ultra performance chromatography mass spectrometry (UPLC-MS/MS) method was developed to q...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-42535-w

    authors: D'Andrea G,Pizzolato G,Gucciardi A,Stocchero M,Giordano G,Baraldi E,Leon A

    更新日期:2019-04-16 00:00:00

  • Instability of 8E5 calibration standard revealed by digital PCR risks inaccurate quantification of HIV DNA in clinical samples by qPCR.

    abstract:ABTRACT:Establishing a cure for HIV is hindered by the persistence of latently infected cells which constitute the viral reservoir. Real-time qPCR, used for quantification of this reservoir by measuring HIV DNA, requires external calibration; a common choice of calibrator is the 8E5 cell line, which is assumed to be st...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-01221-5

    authors: Busby E,Whale AS,Ferns RB,Grant PR,Morley G,Campbell J,Foy CA,Nastouli E,Huggett JF,Garson JA

    更新日期:2017-04-26 00:00:00

  • Drug treatment efficiency depends on the initial state of activation in nonlinear pathways.

    abstract::An accurate prediction of the outcome of a given drug treatment requires quantitative values for all parameters and concentrations involved as well as a detailed characterization of the network of interactions where the target molecule is embedded. Here, we present a high-throughput in silico screening of all potentia...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-30913-9

    authors: Doldán-Martelli V,Míguez DG

    更新日期:2018-08-21 00:00:00

  • Characterization of Plasmodium falciparum NEDD8 and identification of cullins as its substrates.

    abstract::A variety of post-translational modifications of Plasmodium falciparum proteins, including phosphorylation and ubiquitination, are shown to have key regulatory roles during parasite development. NEDD8 is a ubiquitin-like modifier of cullin-RING E3 ubiquitin ligases, which regulates diverse cellular processes. Although...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-77001-5

    authors: Bhattacharjee M,Adhikari N,Sudhakar R,Rizvi Z,Das D,Palanimurugan R,Sijwali PS

    更新日期:2020-11-19 00:00:00

  • Genomic Analyses of Breast Cancer Progression Reveal Distinct Routes of Metastasis Emergence.

    abstract::A main controversy in cancer research is whether metastatic abilities are present in the most advanced clone of the primary tumor or result from independently acquired aberrations in early disseminated cancer cells as suggested by the linear and the parallel progression models, respectively. The genetic concordance be...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep43813

    authors: Krøigård AB,Larsen MJ,Brasch-Andersen C,Lænkholm AV,Knoop AS,Jensen JD,Bak M,Mollenhauer J,Thomassen M,Kruse TA

    更新日期:2017-03-09 00:00:00

  • Food supply confers calcifiers resistance to ocean acidification.

    abstract::Invasion of ocean surface waters by anthropogenic CO2 emitted to the atmosphere is expected to reduce surface seawater pH to 7.8 by the end of this century compromising marine calcifiers. A broad range of biological and mineralogical mechanisms allow marine calcifiers to cope with ocean acidification, however these me...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep19374

    authors: Ramajo L,Pérez-León E,Hendriks IE,Marbà N,Krause-Jensen D,Sejr MK,Blicher ME,Lagos NA,Olsen YS,Duarte CM

    更新日期:2016-01-18 00:00:00

  • β-barrel Oligomers as Common Intermediates of Peptides Self-Assembling into Cross-β Aggregates.

    abstract::Oligomers populated during the early amyloid aggregation process are more toxic than mature fibrils, but pinpointing the exact toxic species among highly dynamic and heterogeneous aggregation intermediates remains a major challenge. β-barrel oligomers, structurally-determined recently for a slow-aggregating peptide de...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-28649-7

    authors: Sun Y,Ge X,Xing Y,Wang B,Ding F

    更新日期:2018-07-09 00:00:00

  • miR-30a acts as a tumor suppressor by double-targeting COX-2 and BCL9 in H. pylori gastric cancer models.

    abstract::Helicobacter pylori (H. pylori) is one of the most important factors that affect the development of gastric cancer, and its mechanism remains un-elucidated. Our present study found that, miR-30a is crucial for regulating the growth and migration of H. pylori infected gastric cancer in vitro by targeting COX-2 and BCL9...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-07193-w

    authors: Liu X,Ji Q,Zhang C,Liu X,Liu Y,Liu N,Sui H,Zhou L,Wang S,Li Q

    更新日期:2017-08-02 00:00:00

  • Internal Motion Estimation by Internal-external Motion Modeling for Lung Cancer Radiotherapy.

    abstract::The aim of this study is to develop an internal-external correlation model for internal motion estimation for lung cancer radiotherapy. Deformation vector fields that characterize the internal-external motion are obtained by respectively registering the internal organ meshes and external surface meshes from the 4DCT i...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-22023-3

    authors: Chen H,Zhong Z,Yang Y,Chen J,Zhou L,Zhen X,Gu X

    更新日期:2018-02-27 00:00:00

  • Assessment of Heterotrophic Growth Supported by Soluble Microbial Products in Anammox Biofilm using Multidimensional Modeling.

    abstract::Anaerobic ammonium oxidation (anammox) is known to autotrophically convert ammonium to dinitrogen gas with nitrite as the electron acceptor, but little is known about their released microbial products and how these are relative to heterotrophic growth in anammox system. In this work, we applied a mathematical model to...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep27576

    authors: Liu Y,Sun J,Peng L,Wang D,Dai X,Ni BJ

    更新日期:2016-06-07 00:00:00

  • Metabolic Reprogramming by Hexosamine Biosynthetic and Golgi N-Glycan Branching Pathways.

    abstract::De novo uridine-diphosphate-N-acetylglucosamine (UDP-GlcNAc) biosynthesis requires glucose, glutamine, acetyl-CoA and uridine, however GlcNAc salvaged from glycoconjugate turnover and dietary sources also makes a significant contribution to the intracellular pool. Herein we ask whether dietary GlcNAc regulates nutrien...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep23043

    authors: Ryczko MC,Pawling J,Chen R,Abdel Rahman AM,Yau K,Copeland JK,Zhang C,Surendra A,Guttman DS,Figeys D,Dennis JW

    更新日期:2016-03-14 00:00:00

  • Superconductivity at 52 K in hydrogen-substituted LaFeAsO(1-x)Hx under high pressure.

    abstract::The 1111-type iron-based superconductor LnFeAsO(1-x)Fx (Ln stands for lanthanide) is the first material with a Tc above 50 K, other than cuprate superconductors. Electron doping into LaFeAsO by H, rather than F, revealed a double-dome-shaped Tc-x diagram, with a first dome (SC1, 0.05

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep07829

    authors: Takahashi H,Soeda H,Nukii M,Kawashima C,Nakanishi T,Iimura S,Muraba Y,Matsuishi S,Hosono H

    更新日期:2015-01-16 00:00:00

  • Study of two G-protein coupled receptor variants of human trace amine-associated receptor 5.

    abstract::Here we report the study of two bioengineered variants of human trace amine-associated receptor 5 (hTAAR5) that were expressed in stable tetracycline-inducible HEK293S cell lines. A systematic detergent screen showed that fos-choline-14 was the optimal detergent to solubilize and subsequently purify the receptors. Mil...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep00102

    authors: Wang X,Corin K,Rich C,Zhang S

    更新日期:2011-01-01 00:00:00

  • Optical orbital angular momentum conservation during the transfer process from plasmonic vortex lens to light.

    abstract::We demonstrate the optical orbital angular momentum conservation during the transfer process from subwavelength plasmonic vortex lens (PVLs) to light and the generating process of surface plasmon polaritons (SPPs). Illuminating plasmonic vortex lenses with beams carrying optical orbital angular momentum, the SP vortic...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep03191

    authors: Yu H,Zhang H,Wang Y,Han S,Yang H,Xu X,Wang Z,Petrov V,Wang J

    更新日期:2013-11-12 00:00:00

  • Dynamics of water bound to crystalline cellulose.

    abstract::Interactions of water with cellulose are of both fundamental and technological importance. Here, we characterize the properties of water associated with cellulose using deuterium labeling, neutron scattering and molecular dynamics simulation. Quasi-elastic neutron scattering provided quantitative details about the dyn...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-12035-w

    authors: O'Neill H,Pingali SV,Petridis L,He J,Mamontov E,Hong L,Urban V,Evans B,Langan P,Smith JC,Davison BH

    更新日期:2017-09-19 00:00:00

  • Detailed classification of swimming paths in the Morris Water Maze: multiple strategies within one trial.

    abstract::The Morris Water Maze is a widely used task in studies of spatial learning with rodents. Classical performance measures of animals in the Morris Water Maze include the escape latency, and the cumulative distance to the platform. Other methods focus on classifying trajectory patterns to stereotypical classes representi...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep14562

    authors: Gehring TV,Luksys G,Sandi C,Vasilaki E

    更新日期:2015-10-01 00:00:00

  • Shedding light on the prefrontal correlates of mental workload in simulated driving: a functional near-infrared spectroscopy study.

    abstract::Optimal mental workload plays a key role in driving performance. Thus, driver-assisting systems that automatically adapt to a drivers current mental workload via brain-computer interfacing might greatly contribute to traffic safety. To design economic brain computer interfaces that do not compromise driver comfort, it...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-80477-w

    authors: Geissler CF,Schneider J,Frings C

    更新日期:2021-01-12 00:00:00