Abstract:
:Nucleotide excision repair (NER) is a versatile system that deals with various bulky and helix-distorting DNA lesions caused by UV and environmental mutagens. Based on how lesion recognition occurs, NER has been separated into global genome repair (GGR) and transcription-coupled repair (TCR). The yeast Rad7-Rad16 complex is indispensable for the GGR sub-pathway. Rad7-Rad16 binds to UV-damaged DNA in a synergistic fashion with Rad4, the main lesion recognizer, to achieve efficient recognition of lesions. In addition, Rad7-Rad16 associates with Elc1 and Cul3 to form an EloC-Cul-SOCS-box (ECS)-type E3 ubiquitin ligase complex that ubiquitinates Rad4 in response to UV radiation. However, the structure and architecture of the Rad7-Rad16-Elc1-Cul3 complex remain unsolved. Here, we determined the structure of the Rad7-Elc1 complex and revealed key interaction regions responsible for the formation of the Rad7-Rad16-Elc1-Cul3 complex. These results provide new insights into the assembly of the Rad7-Rad16-Elc1-Cul3 complex and structural framework for further studies.
journal_name
DNA Repair (Amst)journal_title
DNA repairauthors
Liu L,Huo Y,Li J,Jiang Tdoi
10.1016/j.dnarep.2019.02.012subject
Has Abstractpub_date
2019-05-01 00:00:00pages
1-9eissn
1568-7864issn
1568-7856pii
S1568-7864(18)30195-2journal_volume
77pub_type
杂志文章相关文献
DNA REPAIR文献大全abstract::Base excision repair (BER) of damaged or inappropriate bases in DNA has been reported to take place by single nucleotide insertion or through incorporation of several nucleotides, termed short-patch and long-patch repair, respectively. We found that extracts from proliferating and non-proliferating cells both had capa...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2009.04.002
更新日期:2009-07-04 00:00:00
abstract::Thymidylate deprivation brings about "thymineless death" in prokaryotes and eukaryotes. Although the precise mechanism for thymineless death has remained elusive, inhibition of the enzyme thymidylate synthase (TS), which catalyzes the de novo synthesis of TMP, has served for many years as a basis for chemotherapeutic ...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2008.06.006
更新日期:2008-10-01 00:00:00
abstract::Double-strand breaks in genomic DNA (DSB) are potentially lethal lesions which separate parts of chromosome arms from their centromeres. Repair of DSB by recombination can generate mutations and further chromosomal rearrangements, making the regulation of recombination and the choice of recombination pathways of the h...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2011.04.002
更新日期:2011-06-10 00:00:00
abstract::The Tousled-like kinases are involved in chromatin assembly, DNA repair, transcription, and chromosome segregation. In this work, we show that overexpression of TLK1B hastens repair of double strand breaks (DSBs) in mouse cells. We have identified Rad9 as a protein interacting tightly with TLK1B. TLK1B phosphorylates ...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2008.09.005
更新日期:2009-01-01 00:00:00
abstract::Comparison of the clinical and cellular phenotypes of different genomic instability syndromes provides new insights into functional links in the complex network of the DNA damage response. A prominent example of this principle is provided by examination of three such disorders: ataxia-telangiectasia (A-T) caused by la...
journal_title:DNA repair
pub_type: 杂志文章,评审
doi:10.1016/j.dnarep.2004.04.009
更新日期:2004-08-01 00:00:00
abstract::Human APOBEC3G (A3G) and activation-induced deaminase (AID) belong to a family of DNA-cytosine deaminases. While A3G targets the last C in a run of C's, AID targets C in the consensus sequence WRC (W is A or T and R is a purine). Guided by the structures of the A3G carboxyl-terminal catalytic domain (A3G-CTD), we iden...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2010.02.010
更新日期:2010-05-04 00:00:00
abstract::Telomeres play an important role in protecting the ends of chromosomes and preventing chromosome fusion. We have previously demonstrated that double-strand breaks near telomeres in mammalian cells result in either the addition of a new telomere at the site of the break, termed chromosome healing, or sister chromatid f...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2008.04.004
更新日期:2008-08-02 00:00:00
abstract::The ubiquitin-proteasome pathway plays an important role in DNA damage signaling and repair by facilitating the recruitment and activation of DNA repair factors and signaling proteins at sites of damaged chromatin. Proteasome activity is generally not thought to be required for activation of apical signaling kinases i...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2009.10.008
更新日期:2010-01-02 00:00:00
abstract::ATM and ATR are stress-response kinases which respond to a variety of insults including ionizing radiation, replication arrest, ultraviolet radiation and hypoxia/re-oxygenation. Hypoxia occupies a unique niche in the study of both ATR- and ATM-mediated checkpoint pathways. Hypoxia is a physiologically significant stre...
journal_title:DNA repair
pub_type: 杂志文章,评审
doi:10.1016/j.dnarep.2004.03.035
更新日期:2004-08-01 00:00:00
abstract::In a multicellular organism, somatic mutations represent a permanent record of the past chemical and biochemical perturbations experienced by a cell in its local microenvironment. Akin to a perpetual recording device, with every replication, genomic DNA accumulates mutations in patterns that reflect: i) the sequence c...
journal_title:DNA repair
pub_type: 杂志文章,评审
doi:10.1016/j.dnarep.2018.08.008
更新日期:2018-11-01 00:00:00
abstract::RAre DAmage and Repair sequencing (RADAR-seq) is a highly adaptable sequencing method that enables the identification and detection of rare DNA damage events for a wide variety of DNA lesions at single-molecule resolution on a genome-wide scale. In RADAR-seq, DNA lesions are replaced with a patch of modified bases tha...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2019.06.007
更新日期:2019-08-01 00:00:00
abstract::Human papillomavirus (HPV) is associated with the development of head and neck squamous cell carcinomas (HNSC). Cisplatin is used to treat HNSC and induces DNA adducts including interstrand crosslinks (ICLs). Previous reports have shown that HPV positive HNSC patients respond better to cisplatin therapy. Our previous ...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2020.102802
更新日期:2020-03-01 00:00:00
abstract::The DNA polymerase beta (Pol beta) null background renders mouse embryonic fibroblast (MEF) cells base excision repair deficient and hyper-mutagenic upon treatment with the monofunctional alkylating agent, methyl methanesulfonate (MMS). This effect involves an increase in all types of base substitutions, with a modest...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2005.05.002
更新日期:2005-09-28 00:00:00
abstract::Proteins that act on DNA, or are in close proximity to it, can become inadvertently crosslinked to DNA and form highly toxic lesions, known as DNA-protein crosslinks (DPCs). DPCs are generated by different chemotherapeutics, environmental or endogenous sources of crosslinking agents, or by lesions on DNA that stall th...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2020.102924
更新日期:2020-10-01 00:00:00
abstract::Analysis of the spectrum of UV-induced mutations generated in synchronized wild-type S-phase cells reveals that only approximately 25% of mutations occur at thymine (T), whilst 75% are targeted to cytosine (C). The mutational spectra changes dramatically in XP-V cells, devoid of poleta, where approximately 45% of muta...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2005.09.011
更新日期:2006-02-03 00:00:00
abstract::The DNA repair protein, O(6)-alkylguanine-DNA alkyltransferase (MGMT) can confer resistance to the cancer chemotherapeutic effects of the class of DNA damaging drugs generally referred to as the O(6)-alkylating agents. Inactivation of MGMT is thus a practical approach to improving the efficacy of such agents. An accou...
journal_title:DNA repair
pub_type: 历史文章,杂志文章
doi:10.1016/j.dnarep.2007.03.015
更新日期:2007-08-01 00:00:00
abstract::The DNA damage checkpoint is a surveillance mechanism activated by DNA lesions and devoted to the maintenance of genome stability. It is considered as a signal transduction cascade, involving a sensing step, the activation of a set of protein kinases and the transmission and amplification of the damage signal through ...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2004.06.019
更新日期:2004-12-02 00:00:00
abstract::Mononucleotide microsatellites are tandem repeats of a single base pair, abundant within coding exons and frequent sites of mutation in the human genome. Because the repeated unit is one base pair, multiple mechanisms of insertion/deletion (indel) mutagenesis are possible, including strand-slippage, dNTP-stabilized, a...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2015.02.016
更新日期:2015-05-01 00:00:00
abstract::Mice defective in the mismatch repair (MMR) gene Msh2 manifest an enhanced predisposition to skin cancer associated with exposure to UVB radiation. This predisposition is further heightened if the mice are additionally defective for the nucleotide excision repair gene Xpc. To test the hypothesis that the predispositio...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/s1568-7864(02)00143-x
更新日期:2002-11-03 00:00:00
abstract::Accumulation of 8-oxo-7,8-dihydroguanine (8-oxoG) in the DNA results in genetic instability and mutagenesis, and is believed to contribute to carcinogenesis, aging processes and various aging-related diseases. 8-OxoG is removed from the DNA via DNA base excision repair (BER), initiated by 8-oxoguanine DNA glycosylase-...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2013.06.006
更新日期:2013-10-01 00:00:00
abstract::The human RAD51 recombinase possesses DNA pairing and strand exchange activities that are essential for the error-free, homology-directed repair of DNA double-strand breaks. The recombination activities of RAD51 are activated upon its assembly into presynaptic filaments on single-stranded DNA at resected DSB ends. Def...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2017.10.008
更新日期:2017-12-01 00:00:00
abstract::Loss of telomeres stability is a hallmark of cancer cells. Exposed telomeres are prone to aberrant end-joining reactions leading to chromosomal fusions and translocations. Human telomeres contain repeated TTAGGG elements, in which the 3' exposed strand may adopt a G-quadruplex (G4) structure. The guanine-rich regions ...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2018.11.010
更新日期:2019-01-01 00:00:00
abstract::Huntington disease (HD) is associated with an unstable trinucleotide CAG.CTG repeat expansion. Although the repeat length is inversely correlated with the age-at-onset of symptoms, variability between patients who have inherited the same HD repeat length clearly suggests that other factors influence this aspect of the...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2007.01.002
更新日期:2007-06-01 00:00:00
abstract::recX is a small open reading frame located downstream of recA that is conserved in many bacteria. In Escherichia coli, the recX gene (also named oraA) is a 501 bp open reading frame that encodes a predicted basic protein. Transcriptional analysis by Northern blots showed that in E. coli the recX gene is SOS-regulated....
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/s1568-7864(02)00217-3
更新日期:2003-03-01 00:00:00
abstract::The Escherichia coli orf135 gene encodes a 15.4kDa protein with homology to the MutT family of nucleotide hydrolases. The orf135 gene was cloned within a glutathione S-transferase (GST) fusion protein expression vector, which was used to overproduce the GST-Orf135 fusion protein in E. coli. The fusion protein thus obt...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/s1568-7864(02)00057-5
更新日期:2002-07-17 00:00:00
abstract::Oxidative DNA damage is implicated in brain aging, neurodegeneration and neurological diseases. Damage can be created by normal cellular metabolism, which accumulates with age, or by acute cellular stress conditions which create bursts of oxidative damage. Brain cells have a particularly high basal level of metabolic ...
journal_title:DNA repair
pub_type: 杂志文章,评审
doi:10.1016/j.dnarep.2013.04.010
更新日期:2013-08-01 00:00:00
abstract::AA8 Chinese hamster ovary cells were treated with halogenated nucleosides analogues of thymidine, namely CldU, 5-iodo-2'-deoxyuridine (IdU), and 5-bromo-2'-deoxyuridine (BrdU), following different experimental protocols. The purpose was to see whether incorporation of exogenous pyrimidine analogues into DNA could inte...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/s1568-7864(03)00044-2
更新日期:2003-06-11 00:00:00
abstract::Conflicts between replication and transcription can have life-threatening consequences. RNA polymerase (RNAP) is the major impediment to replication progression, and its efficient removal from DNA should mitigate the consequences of collisions with replication. Cells have various proteins that can resolve conflicts by...
journal_title:DNA repair
pub_type: 杂志文章,评审
doi:10.1016/j.dnarep.2019.102659
更新日期:2019-09-01 00:00:00
abstract::Gene amplification, a key mechanism for oncogene activation and drug resistance in tumour cells, involves the generation and joining of DNA double-strand breaks. Amplified DNA can be carried either on intra-chromosomal arrays or on extra-chromosomal elements (double minutes). We previously showed that, in rodent cells...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2008.08.015
更新日期:2009-01-01 00:00:00
abstract::Deinococcus radiodurans survives extremely high doses of ionizing and ultraviolet radiation and treatment with various DNA-damaging chemicals. As an effort to identify and characterize proteins that function in DNA repair in this organism, we have studied the protein encoded by locus DR1572. This gene is predicted to ...
journal_title:DNA repair
pub_type: 杂志文章
doi:10.1016/j.dnarep.2008.12.011
更新日期:2009-05-01 00:00:00