Altererythrobacter aquaemixtae sp. nov., isolated from the junction between the ocean and a freshwater spring.

Abstract:

:A Gram-stain-negative, aerobic, non-motile and ovoid or rod-shaped bacterial strain, designated JSSK-8T, was isolated from the place where the ocean and a freshwater spring meet at Jeju Island, South Korea. Strain JSSK-8T grew optimally at pH 7.0-8.0, at 30 °C and in the presence of 2.0 % (w/v) NaCl. In a neighbour-joining phylogenetic tree based on 16S rRNA gene sequences, strain JSSK-8T fell within the clade comprising the type strains of species of the genus Altererythrobacter. Strain JSSK-8T exhibited 16S rRNA gene sequence similarity values of 97.7 and 97.2 % to the type strains of Altererythrobacteraestiaquae and Altererythrobacterluteolus, respectively, and of 93.5-96.2 % to the type strains of the other species of the genus Altererythrobacter. Strain JSSK-8T contained Q-10 as the predominant ubiquinone and C18 : 1ω7c, summed feature 3 (C16 : 1ω6c and/or C16 : 1ω7c), C17 : 1ω6c, C16 : 0 and 11-methyl C18 : 1ω7c as the major fatty acids. The major polar lipids detected in strain JSSK-8T were phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol and sphingoglycolipid. The DNA G+C content of strain JSSK-8T was 59.0 mol%, and its mean DNA-DNA relatedness values with the type strains of A. aestiaquae and A. luteolus were 13 and 16 %, respectively. Differential phenotypic properties, together with the phylogenetic and genetic distinctiveness, revealed that strain JSSK-8T is separated from recognized species of the genus Altererythrobacter. On the basis of the data presented, strain JSSK-8T is considered to represent a novel species of the genus Altererythrobacter, for which the name Altererythrobacter aquaemixtae sp. nov. is proposed. The type strain is JSSK-8T (=KCTC 52763T=NBRC 112764T).

authors

Park S,Jung YT,Choi SJ,Yoon JH

doi

10.1099/ijsem.0.002136

subject

Has Abstract

pub_date

2017-09-01 00:00:00

pages

3446-3451

issue

9

eissn

1466-5026

issn

1466-5034

journal_volume

67

pub_type

杂志文章
  • Agarivorans albus gen. nov., sp. nov., a gamma-proteobacterium isolated from marine animals.

    abstract::Six bacterial strains were isolated from healthy marine organisms that were collected from the coast of the Kanto area in Japan. Phylogenetic analysis based on 16S rDNA sequence similarity showed that the six isolates formed a separate cluster in the gamma-Proteobacteria and were related to the genera Alteromonas and ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02778-0

    authors: Kurahashi M,Yokota A

    更新日期:2004-05-01 00:00:00

  • Arthrobacter nasiphocae sp. nov., from the common seal (Phoca vitulina).

    abstract::An unknown gram-positive, catalase-positive, strictly aerobic, rod-shaped bacterium was isolated from the nasal cavities of two common seals. Chemical analysis revealed the presence in the bacterium of a hitherto unknown cell-wall murein [type: L-Lys-L-Ala2-Gly(2-3)-L-Ala (Gly)]. Comparative 16S rRNA gene sequencing s...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-52-2-569

    authors: Collins MD,Hoyles L,Foster G,Falsen E,Weiss N

    更新日期:2002-03-01 00:00:00

  • Mesorhizobium waimense sp. nov. isolated from Sophora longicarinata root nodules and Mesorhizobium cantuariense sp. nov. isolated from Sophora microphylla root nodules.

    abstract::In total 14 strains of Gram-stain-negative, rod-shaped bacteria were isolated from Sophora longicarinata and Sophora microphylla root nodules and authenticated as rhizobia on these hosts. Based on the 16S rRNA gene phylogeny, they were shown to belong to the genus Mesorhizobium, and the strains from S. longicarinata w...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000430

    authors: De Meyer SE,Wee Tan H,Heenan PB,Andrews M,Willems A

    更新日期:2015-10-01 00:00:00

  • Cystobasidium halotolerans sp. nov., a novel basidiomycetous yeast species isolated from the Arabian Gulf.

    abstract::Two strains, 1Y129 and 3Y383, which represent a single novel anamorphic yeast species, were isolated from the Arabian Gulf surrounding Qatar. The two strains have identical sequences in the D1/D2 domains of the large subunit (LSU) and the internal transcribed spacer (ITS) regions of the rRNA gene. On the basis of this...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003250

    authors: Fotedar R,Fell JW,Boekhout T,Kolecka A,Zeyara A,Kaul R,Malki AA,Marri MA

    更新日期:2019-03-01 00:00:00

  • Campylobacter armoricus sp. nov., a novel member of the Campylobacter lari group isolated from surface water and stools from humans with enteric infection.

    abstract::During a study on the prevalence and diversity of members of the genus Campylobacter in a shellfish-harvesting area and its catchment in Brittany, France, six urease-positive isolates of members of the genus Campylobacter were recovered from surface water samples, as well as three isolates from stools of humans displa...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003836

    authors: Boukerb AM,Penny C,Serghine J,Walczak C,Cauchie HM,Miller WG,Losch S,Ragimbeau C,Mossong J,Mégraud F,Lehours P,Bénéjat L,Gourmelon M

    更新日期:2019-12-01 00:00:00

  • Massilia tieshanensis sp. nov., isolated from mining soil.

    abstract::A bacterial isolate, designated strain TS3(T), was isolated from soil collected from a metal mine in Tieshan District, Daye City, Hubei Province, in central China. Cells of this strain were Gram-negative, motile and rod-shaped. The strain had ubiquinone Q-8 as the predominant respiratory quinone, phosphatidylethanolam...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.034306-0

    authors: Du Y,Yu X,Wang G

    更新日期:2012-10-01 00:00:00

  • Marortus luteolus gen. nov., sp. nov., isolated from surface seawater of the East Sea in China.

    abstract::A Gram-stain-negative, motile, aerobic, rod-shaped bacterium with flagella, designated ZX-21T, was isolated from surface seawater of the East Sea in Zhoushan, China. Growth of strain ZX-21T was observed at 10--35  o°C (optimum, 30 °C), at pH 6.0-8.5 (pHoptimum 6.5-7.0) and in the presence of 0.5-8 % (w/v) NaCl (optimu...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003348

    authors: Yu XD,Yu XY,Fu GY,Zhao Z,Shen X,Sun C,Wu M

    更新日期:2019-05-01 00:00:00

  • Larkinella soli sp. nov., isolated from biological soil crusts.

    abstract::A novel bacterial strain, designated MIMbqt9T, was isolated from biological soil crusts collected in Erdos Plateau in Inner Mongolia. Cells were light pink, rod-shaped, aerobic, Gram-reaction-negative, motile by gliding, oxidase- and catalase-positive. Cell growth could be observed at 5-40 °C (optimum at 30 °C), at pH...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002431

    authors: Xu F,Tao Y,Li H,Meng J,Zhang Z,Feng F

    更新日期:2017-12-01 00:00:00

  • Herbihabitans rhizosphaerae gen. nov., sp. nov., a member of the family Pseudonocardiaceae isolated from rhizosphere soil of the herb Limonium sinense (Girard).

    abstract::The taxonomic position of an actinobacterium, designated CPCC 204279T, which was isolated from a rhizosphere soil sample of the herb Limonium sinense collected from Xinjiang Province, China, was established using a polyphasic approach. Whole-cell hydrolysates of strain CPCC 204279T contained galactose and arabinose as...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001325

    authors: Zhang CF,Ai MJ,Wang JX,Liu SW,Zhao LL,Su J,Sun CH,Yu LY,Zhang YQ

    更新日期:2016-10-01 00:00:00

  • Thermococcoides shengliensis gen. nov., sp. nov., a new member of the order Thermotogales isolated from oil-production fluid.

    abstract::A novel thermophilic, strictly anaerobic, heterotrophic bacterium, strain 2SM-2(T), was isolated from the Shengli oilfield, China. This organism was identified as a member of the order Thermotogales on the basis of its 16S rRNA gene sequence and the presence of an external membranous toga-like structure. Cells stained...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.013912-0

    authors: Feng Y,Cheng L,Zhang X,Li X,Deng Y,Zhang H

    更新日期:2010-04-01 00:00:00

  • Genome-based reclassification of Lactobacillus casei: emended classification and description of the species Lactobacillus zeae.

    abstract::Taxonomic relationships between Lactobacillus casei, Lactobacillus paracasei and Lactobacillus zeae have long been debated. Results of previous analyses have shown that overall genome relatedness indices (such as average nucleotide identity and core nucleotide identity) between the type strains L. casei ATCC 393T and ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003969

    authors: Huang CH,Chen CC,Liou JS,Lee AY,Blom J,Lin YC,Huang L,Watanabe K

    更新日期:2020-06-01 00:00:00

  • Oceanibium sediminis gen. nov., sp. nov., isolated from marine sediment.

    abstract::A novel Gram-stain-negative, rod-shaped marine bacterium, designated as strain O448T, was isolated from the coastal area of Weihai, China (122° 14' E, 36° 54' N). Cells of strain O448T were non-motile, aerobic, approximately 0.4-0.6 µm wide and 1.5-2.0 µm long. Growth occurred at 20-40 °C (optimally between 33-37 °C),...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003139

    authors: Chang YQ,Meng X,Du ZZ,Du ZJ

    更新日期:2019-01-01 00:00:00

  • Dyadobacter luticola sp. nov., isolated from a sewage sediment sample.

    abstract::A Gram-stain-negative, non-motile, aerobic bacterial strain, designated T17T was isolated from a sample of sewage sediment from a Busan park (Republic of Korea). Phylogenetic analysis based on 16S rRNA gene sequences showed that strain T17T had the highest 16S rRNA gene sequence similarity to Dyadobacter soli KCTC 224...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003178

    authors: Song Z,Song Y,Yu Y,Choi L,Wang G,Li M

    更新日期:2019-02-01 00:00:00

  • Hydrogenophaga caeni sp. nov., isolated from activated sludge.

    abstract::A Gram-negative bacterium, designated strain EMB71(T), was isolated from activated sludge used for enhanced biological phosphorus removal in a sequencing batch reactor. The cells of the isolate were facultatively aerobic, motile rods with single polar flagella. Growth was observed to occur at 15-35 degrees C (optimall...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64629-0

    authors: Chung BS,Ryu SH,Park M,Jeon Y,Chung YR,Jeon CO

    更新日期:2007-05-01 00:00:00

  • Actinokineospora spheciospongiae sp. nov., isolated from the marine sponge Spheciospongia vagabunda.

    abstract::A Gram-staining-positive, aerobic organism, isolated from the Red Sea sponge Spheciospongia vagabunda was investigated to determine its taxonomic position. On the basis of results of 16S rRNA gene sequence analysis strain EG49(T) was most closely related to Actinokineospora cibodasensis and Actinokineospora baliensis ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.000031

    authors: Kämpfer P,Glaeser SP,Busse HJ,Abdelmohsen UR,Ahmed S,Hentschel U

    更新日期:2015-03-01 00:00:00

  • Gillisia myxillae sp. nov., a novel member of the family Flavobacteriaceae, isolated from the marine sponge Myxilla incrustans.

    abstract::A yellow-pigmented, Gram-negative, rod-shaped, strictly aerobic bacterium (strain UST050418-085(T)) was isolated from the surface of a marine sponge, Myxilla incrustans, at Friday Harbor, WA, USA. The DNA G+C content of this strain was 34.6 mol%. The predominant fatty acids were i15 : 0, a15 : 0, i15 : 1, i16 : 0, i17...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64345-0

    authors: Lee OO,Lau SCK,Tsoi MMY,Li X,Plakhotnikova I,Dobretsov S,Wu MCS,Wong PK,Qian PY

    更新日期:2006-08-01 00:00:00

  • Characterization of Vibrio viscosus and Vibrio wodanis isolated at different geographical locations: a proposal for reclassification of Vibrio viscosus as Moritella viscosa comb. nov.

    abstract::Vibrio viscosus and Vibrio wodanis are recently described species of psychrotropic bacteria that have been found associated with a disease called 'winter ulcer', affecting salmonid fish reared in saline water in Norway, Iceland and recently in Scotland. V. viscosus and V. wodanis strains initially isolated from fish i...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-50-2-479

    authors: Benediktsdóttir E,Verdonck L,Spröer C,Helgason S,Swings J

    更新日期:2000-03-01 00:00:00

  • Acuticoccus kandeliae sp. nov., isolated from rhizosphere soil of the mangrove plant Kandelia, and emended description of Acuticoccus yangtzensis.

    abstract::A novel bacterial strain, J103T, was isolated from rhizosphere soil of the mangrove plant Kandelia in Mai Po Inner Deep Bay Ramsar Site, Hong Kong. The strain was aerobic, Gram-stain-negative, oval-shaped with folds in the middle, non-motile and non-spore-forming. It grew at temperatures of 20-30 °C (optimum, 25-30 °C...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002990

    authors: Yin Q,Liang J,Zhang L,Ma K,Hu ZL,Zhang Y,Xu Y

    更新日期:2018-10-01 00:00:00

  • Skermanella aerolata sp. nov., isolated from air, and emended description of the genus Skermanella.

    abstract::A light-pink-coloured bacterium, designated strain 5416T-32(T), was isolated from an air sample in Korea. Cells of the strain were strictly aerobic, Gram-negative, motile (single polar or subpolar flagellum) and rod-shaped. Optimal growth occurred at 25-30 degrees C and at pH 6.0-7.0. The major quinones were Q-10 and ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64676-0

    authors: Weon HY,Kim BY,Hong SB,Joa JH,Nam SS,Lee KH,Kwon SW

    更新日期:2007-07-01 00:00:00

  • Ekhidna lutea gen. nov., sp. nov., a member of the phylum Bacteroidetes isolated from the South East Pacific Ocean.

    abstract::A novel aerobic, heterotrophic bacterium, designated BiosLi39(T), was isolated from the South East Pacific Ocean. Cells were Gram-negative gliding rods forming yellow colonies on marine agar. The isolate was oxidase-, catalase- and alkaline phosphatase-positive and β-galactosidase-negative. Strain BiosLi39(T) grew at ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.018804-0

    authors: Alain K,Tindall BJ,Catala P,Intertaglia L,Lebaron P

    更新日期:2010-12-01 00:00:00

  • Genetic diversity and symbiotic effectiveness of Bradyrhizobium strains nodulating selected annual grain legumes growing in Ethiopia.

    abstract::Vigna unguiculata, Vigna radiata and Arachis hypogaea growing in Ethiopia are nodulated by a genetically diverse group of Bradyrhizobium strains. To determine the genetic identity and symbiotic effectiveness of these bacteria, a collection of 36 test strains originating from the root nodules of the three hosts was inv...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002486

    authors: Degefu T,Wolde-Meskel E,Rasche F

    更新日期:2018-01-01 00:00:00

  • Fervidicola ferrireducens gen. nov., sp. nov., a thermophilic anaerobic bacterium from geothermal waters of the Great Artesian Basin, Australia.

    abstract::A strictly anaerobic, thermophilic bacterium, designated strain Y170(T), was isolated from a microbial mat colonizing thermal waters of a run-off channel created by the free-flowing waters of a Great Artesian Basin (GAB) bore well (New Lorne bore; registered number 17263). Cells of strain Y170(T) were slightly curved ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.004200-0

    authors: Ogg CD,Patel BK

    更新日期:2009-05-01 00:00:00

  • Saccharomonospora piscinae sp. nov., a novel actinobacterium from fishpond sediment in Taiwan.

    abstract::Strain 06168H-1T was isolated from a fishpond sediment sample collected from the southern area of Taiwan, and a polyphasic approach was used to determine its taxonomic position. The isolate grew between 20-40 °C and 0-8 % (w/v) NaCl. It produced branched and unfragmented substrate mycelia. Short spore chains (3-10 spo...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002653

    authors: Tseng M,Chiang WP,Liao HC,Hsieh SY,Yuan GF

    更新日期:2018-05-01 00:00:00

  • Muriicola jejuensis gen. nov., sp. nov., isolated from seawater.

    abstract::An aerobic, yellow-orange-pigmented, Gram-staining-negative bacterium, designated strain EM44(T), was isolated from seawater on the eastern coast of Jeju Island, Korea. Growth was observed at 15-35 degrees C (optimum 25-30 degrees C), pH 6.5-9.0 (optimum pH 7.0-8.5) and between 1 and 5 % NaCl (w/v) (optimum 2-4 %). Ce...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.015313-0

    authors: Kahng HY,Lee SS,Kim JM,Jung JY,Lee MY,Park W,Jeon CO

    更新日期:2010-07-01 00:00:00

  • Marmoricola ginsengisoli sp. nov. and Marmoricola pocheonensis sp. nov. isolated from a ginseng-cultivating field.

    abstract::Two novel actinobacteria, designated strains Gsoil 097T and Gsoil 818T, isolated from soil of a ginseng field, South Korea, were characterized by a polyphasic approach to clarify their taxonomic positions. They were Gram-reaction-positive, aerobic, non-spore-forming and rod-shaped. Phylogenetic analysis based on 16S r...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000977

    authors: Lee HY,Liu Q,Kang MS,Kim SK,Lee SY,Im WT

    更新日期:2016-05-01 00:00:00

  • Streptomyces lacrimifluminis sp. nov., a novel actinobacterium that produces antibacterial compounds, isolated from soil.

    abstract::A novel actinobacterial strain, designated Z1027T, was isolated from a soil sample collected near the Tuotuo River, Qinghai-Tibet Plateau (China). The strain exhibited antibacterial activity against Escherichia coli and Staphylococcus aureus. The taxonomic position of strain Z1027T was determined using a polyphasic ap...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001456

    authors: Zhang B,Tang S,Chen X,Zhang L,Zhang G,Zhang W,Liu G,Chen T,Li S,Dyson P

    更新日期:2016-12-01 00:00:00

  • Emticicia sediminis sp. nov. isolated from sediment of a shallow stream.

    abstract::A novel bacterial strain, designated JBR12T, was isolated from sediment of a shallow stream in Cheonan, Korea. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain JBR12T belongs to the genus Emticicia, and indicated that its closest relatives are Emticicia oligotrophica DSM 17448T (97.8 % sequenc...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.000292

    authors: Park SE,Lee S,Kim H,Ahn TY

    更新日期:2015-08-01 00:00:00

  • Nonomuraea nitratireducens sp. nov., a new actinobacterium isolated from Suaeda australis Moq. rhizosphere.

    abstract::A novel actinomycete, designated WYY166T, was isolated from the rhizosphere of Suaeda australis Moq. collected in Dongfang, PR China. The taxonomic position of this strain was investigated using a polyphasic approach. Phylogenetic analysis based on its 16S rRNA gene referred strain WYY166T to the genus Nonomuraea, and...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.004377

    authors: Ou Y,Sheng Y,Hu X,Leng D,Huang J,Hu Z,Bai L,Deng Z,Kang Q,Wu Y

    更新日期:2020-09-01 00:00:00

  • Actinomadura syzygii sp. nov., an endophytic actinomycete isolated from the roots of a jambolan plum tree (Syzygium cumini L. Skeels).

    abstract::The taxonomic position of an endophytic actinomycete, strain GKU 157T, isolated from the roots of a jambolan plum tree (Syzygium cumini L. Skeels) collected at Khao Khitchakut National Park, Chantaburi province, Thailand, was determined using a polyphasic taxonomic approach. 16S rRNA gene sequence analysis revealed th...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.000203

    authors: Rachniyom H,Matsumoto A,Indananda C,Duangmal K,Takahashi Y,Thamchaipenet A

    更新日期:2015-06-01 00:00:00

  • Bacillus safensis sp. nov., isolated from spacecraft and assembly-facility surfaces.

    abstract::Thirteen strains of a novel spore-forming, Gram-positive, mesophilic heterotrophic bacterium were isolated from spacecraft surfaces (Mars Odyssey Orbiter) and assembly-facility surfaces at the Jet Propulsion Laboratory in California and the Kennedy Space Center in Florida. Phylogenetic analysis of 16S rRNA gene sequen...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64189-0

    authors: Satomi M,La Duc MT,Venkateswaran K

    更新日期:2006-08-01 00:00:00