Arthrobacter nasiphocae sp. nov., from the common seal (Phoca vitulina).

Abstract:

:An unknown gram-positive, catalase-positive, strictly aerobic, rod-shaped bacterium was isolated from the nasal cavities of two common seals. Chemical analysis revealed the presence in the bacterium of a hitherto unknown cell-wall murein [type: L-Lys-L-Ala2-Gly(2-3)-L-Ala (Gly)]. Comparative 16S rRNA gene sequencing showed that the unidentified rod was related to the Arthrobacter group of organisms, although sequence divergence values of >3% from established members of this genus indicated that it represents a novel species. On the basis of phenotypic and phylogenetic considerations, it is proposed that the unknown bacterium from seals (Phoca vitulina) be classified as a novel species, Arthrobacter nasiphocae sp. nov. The type strain of Arthrobacter nasiphocae is CCUG 42953T.

authors

Collins MD,Hoyles L,Foster G,Falsen E,Weiss N

doi

10.1099/00207713-52-2-569

keywords:

subject

Has Abstract

pub_date

2002-03-01 00:00:00

pages

569-571

issue

Pt 2

eissn

1466-5026

issn

1466-5034

journal_volume

52

pub_type

杂志文章
  • Flavobacterium alkalisoli sp. nov., isolated from rhizosphere soil of Suaeda salsa.

    abstract::A Gram-negative, strictly aerobic, gliding motility, none-spore forming, yellow, rods bacterial strain, designated XS-5T, was isolated from rhizosphere soil of Suaeda salsa, in Tumd Right Banner, Inner Mongolia, PR China. A phylogenetic tree based on the 16S rRNA gene sequences and the phylogenomic tree both showed th...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.004255

    authors: Xu L,Wang HT,Zhang JX,Zhang H,Wang S,Sun JQ

    更新日期:2020-06-01 00:00:00

  • List of new names and new combinations previously effectively, but not validly, published.

    abstract::The purpose of this announcement is to effect the valid publication of the following effectively published new names and new combinations under the procedure described in the Bacteriological Code (1990 Revision). Authors and other individuals wishing to have new names and/or combinations included in future lists shoul...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001585

    authors: Oren A,Garrity GM

    更新日期:2016-11-01 00:00:00

  • Alteromonas marina sp. nov., isolated from sea water of the East Sea in Korea.

    abstract::Two Gram-negative, motile, non-spore-forming and moderately halophilic rods (strains SW-47(T) and SW-49) were isolated from sea water of the East Sea in Korea and subjected to a polyphasic taxonomic study. The two strains grew optimally between 30 and 37 degrees C, and grew at 4 and 44 degrees C but not at temperature...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02536-0

    authors: Yoon JH,Kim IG,Kang KH,Oh TK,Park YH

    更新日期:2003-09-01 00:00:00

  • Siphonobacter aquaeclarae gen. nov., sp. nov., a novel member of the family 'Flexibacteraceae', phylum Bacteroidetes.

    abstract::A Gram-negative bacterium, designated P2(T), was isolated from the biofilm developed on the inner surface of an ultrapure cooling water system in a Hungarian power plant and was characterized by a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain P2(T) was affiliated with...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.019398-0

    authors: Táncsics A,Kéki Z,Márialigeti K,Schumann P,Tóth EM

    更新日期:2010-11-01 00:00:00

  • Deinococcus persicinus sp. nov., a radiation-resistant bacterium from soil.

    abstract::Two Gram-stain-negative, oxidase-negative, catalase-positive, aerobic and coccus-shaped bacterial strains, KSY3-6T and JSH6-18, were isolated from soil in South Korea. Strains KSY3-6T and JSH6-18 showed high resistance to gamma-ray and UVC irradiation. The 16S rRNA gene sequences of strains KSY3-6T and JSH6-18 showed ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001473

    authors: Jeon SH,Kang MS,Joo ES,Kim EB,Lim S,Jeong SW,Jung HY,Srinivasan S,Kim MK

    更新日期:2016-12-01 00:00:00

  • Nitrincola tibetensis sp. nov., isolated from Lake XuguoCo on the Tibetan Plateau.

    abstract::A novel Gram-stain-negative, motile and rod-shaped bacterium, designated xg18T, was isolated from Lake XuguoCo on the Tibetan Plateau. The strain was able to grow optimally at 0-2 % NaCl and tolerate up to 6 % NaCl. Growth occurred at pH 7.0-11.0 (optimum, pH 9.0-10.0) and 15-40 °C (optimum, 37 °C). Vitamins were not ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003111

    authors: Phurbu D,Pema Y,Ma C,Lu H,Li H,Tian Y,Xing P

    更新日期:2019-01-01 00:00:00

  • Metallosphaera tengchongensis sp. nov., an acidothermophilic archaeon isolated from a hot spring.

    abstract::Two novel acidothermophilic archaea, strains Ric-A(T) and Ric-F, were isolated from muddy water samples of a sulfuric hot spring located in Tengchong County, Yunnan Province, PR China. The strains were aerobic and facultatively chemolithoautotrophic. Both strains could oxidize S(0) and K2S4O6 for autotrophic growth, a...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.070870-0

    authors: Peng TJ,Liu LJ,Liu C,Yang ZF,Liu SJ,Jiang CY

    更新日期:2015-02-01 00:00:00

  • Paenibacillus borealis sp. nov., a nitrogen-fixing species isolated from spruce forest humus in Finland.

    abstract::Seven spore-forming, nitrogen-fixing bacterial isolates from spruce forest humus in Finland were studied using the polyphasic approach. PCR amplification of 16S rRNA gene fragment with specific primers showed that the isolates were members of Paenibacillus. Levels of 16S rDNA similarity between the isolates were 97.3-...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-51-2-535

    authors: Elo S,Suominen I,Kämpfer P,Juhanoja J,Salkinoja-Salonen M,Haahtela K

    更新日期:2001-03-01 00:00:00

  • Lewinella xylanilytica sp. nov., a member of the family Saprospiraceae isolated from coastal seawater.

    abstract::An orange-pigmented bacterium, designated strain 13-9-B8T, was isolated from a seawater sample collected at Marado, Jeju Island, South Korea. The novel strain was Gram-staining-negative, non-motile, non-gliding, rod-shaped and aerobic. A phylogenetic analysis based on 16S rRNA gene sequences revealed that the strain c...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000435

    authors: Sung HR,Lee JM,Kim M,Shin KS

    更新日期:2015-10-01 00:00:00

  • Rhodothermus profundi sp. nov., a thermophilic bacterium isolated from a deep-sea hydrothermal vent in the Pacific Ocean.

    abstract::Nine thermophilic strains of aerobic, non-sporulating, heterotrophic bacteria were isolated after enrichment of chimney material sampled from a deep-sea hydrothermal field at a depth of 2634m on the East-Pacific Rise (1 °N). The bacteria stained Gram-negative. They were rod-shaped and measured approximately 0.5μm in w...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.012724-0

    authors: Marteinsson VT,Bjornsdottir SH,Bienvenu N,Kristjansson JK,Birrien JL

    更新日期:2010-12-01 00:00:00

  • Shewanella japonica sp. nov.

    abstract::Two strains of agar-digesting bacteria, KMM 3299T and KMM 3300, respectively isolated from sea water and the mussel Protothaca jedoensis, have been characterized. Based on sequencing of the 16S rRNA gene, KMM 3299T showed the highest similarity (93-95%) to members of the genus Shewanella. The G+C contents of the DNAs ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-51-3-1027

    authors: Ivanova EP,Sawabe T,Gorshkova NM,Svetashev VI,Mikhailov VV,Nicolau DV,Christen R

    更新日期:2001-05-01 00:00:00

  • Validation of publication of new names and new combinations previously effectively published outside the IJSEM.

    abstract::The purpose of this announcement is to effect the valid publication of the following new names and new combinations under the procedure described in the Bacteriological Code (1990 Revision). Authors and other individuals wishing to have new names and/or combinations included in future lists should send three copies of...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63263-0

    authors:

    更新日期:2004-05-01 00:00:00

  • Neisseria wadsworthii sp. nov. and Neisseria shayeganii sp. nov., isolated from clinical specimens.

    abstract::An analysis of 16S rRNA gene sequences from archived clinical reference specimens has identified two novel Neisseria species. For each species, two strains from independent sources were identified. Amongst species with validly published names, the closest species to the newly identified organisms were Neisseria canis,...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.022426-0

    authors: Wolfgang WJ,Carpenter AN,Cole JA,Gronow S,Habura A,Jose S,Nazarian EJ,Kohlerschmidt DJ,Limberger R,Schoonmaker-Bopp D,Spröer C,Musser KA

    更新日期:2011-01-01 00:00:00

  • International Committee on Systematics of Prokaryotes Subcommittee on the taxonomy of Mollicutes: Minutes of the closed meeting, 8 July 2018, Portsmouth, New Hampshire, USA.

    abstract::This report documents the International Committee on Systematics of Prokaryotes Subcommittee on the taxonomy of Mollicutes by recording the minutes of the meeting, held 8 July 2018, Portsmouth, New Hampshire, USA. ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003342

    authors: May M,Brown DR

    更新日期:2019-07-01 00:00:00

  • Flavobacterium terrae sp. nov. and Flavobacterium cucumis sp. nov., isolated from greenhouse soil.

    abstract::Two bacterial strains, R2A1-13(T) and R2A45-3(T), were isolated from greenhouse soils in Korea. The cells of both strains were Gram-negative, aerobic and rod-shaped. 16S rRNA gene sequence analysis placed the isolates in the genus Flavobacterium within the family Flavobacteriaceae. Strain R2A1-13(T) was found to be re...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64935-0

    authors: Weon HY,Song MH,Son JA,Kim BY,Kwon SW,Go SJ,Stackebrandt E

    更新日期:2007-07-01 00:00:00

  • Ochrobactrum pituitosum sp. nov., isolated from an industrial environment.

    abstract::Strain CCUG 50899, a Gram-negative, rod-shaped, non-spore-forming, motile bacterium isolated from industrial environment in Sweden and tentatively assigned to the species Ochrobactrum anthropi, was studied in order to clarify its taxonomic status. 16S rRNA gene sequence similarities placed the strain in the genus Ochr...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.011668-0

    authors: Huber B,Scholz HC,Kämpfer P,Falsen E,Langer S,Busse HJ

    更新日期:2010-02-01 00:00:00

  • Aliidiomarina sedimenti sp. nov., a haloalkaliphilic bacterium in the family Idiomarinaceae.

    abstract::A novel Gram-staining-negative straight or curved rod-shaped, moderately halophilic and alkaliphilic bacterium, designated strain GBSy1T, was isolated from a sediment sample from the coastal-marine wetland Gomishan in Iran. GBSy1T was motile, and formed non-pigmented, mucoid colonies. Growth occurred with between 1 an...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001772

    authors: Shahinpei A,Amoozegar MA,Shahzadeh Fazeli SA,Schumann P,Spröer C,Ventosa A

    更新日期:2017-07-01 00:00:00

  • Reclassification of Thermoterrabacterium ferrireducens as Carboxydothermus ferrireducens comb. nov., and emended description of the genus Carboxydothermus.

    abstract::Similarities in phylogeny and metabolic properties between the type species of two monospecific genera of thermophilic anaerobic bacteria, Carboxydothermus hydrogenoformans and Thermoterrabacterium ferrireducens, and analysis of their recently available 16S rRNA gene sequences warranted clarification of their taxonomi...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64503-0

    authors: Slobodkin AI,Sokolova TG,Lysenko AM,Wiegel J

    更新日期:2006-10-01 00:00:00

  • Multilocus sequence analysis of the family Halomonadaceae.

    abstract::Multilocus sequence analysis (MLSA) protocols have been developed for species circumscription for many taxa. However, at present, no studies based on MLSA have been performed within any moderately halophilic bacterial group. To test the usefulness of MLSA with these kinds of micro-organisms, the family Halomonadaceae,...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.032938-0

    authors: de la Haba RR,Márquez MC,Papke RT,Ventosa A

    更新日期:2012-03-01 00:00:00

  • Rubrobacter indicoceani sp. nov., a new marine actinobacterium isolated from Indian Ocean sediment.

    abstract::A novel mesophilic marine actinobacterial strain, designated as SCSIO 08198T, was isolated from a deep-sea sediment sample collected from the Indian Ocean. The strain was Gram-stain-positive, rod-shaped and salmon pink in colour. Good growth occurred on marine agar with 1-5 % (w/v) NaCl and incubation at 28 °C for mor...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003018

    authors: Chen RW,Wang KX,Wang FZ,He YQ,Long LJ,Tian XP

    更新日期:2018-11-01 00:00:00

  • Rhodoligotrophos appendicifer gen. nov., sp. nov., an appendaged bacterium isolated from a freshwater Antarctic lake.

    abstract::A Gram-stain-negative, non-spore-forming, non-motile, irregularly circular, aerobic/microaerobic appendaged bacterium (strain 120-1(T)) was isolated from Naga-ike, one of the freshwater lakes in the Skarvsnes ice-free area of Antarctica. Strain 120-1(T) grew between 5 and 35 °C, with optimum growth at 30 °C. The pH ra...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.032953-0

    authors: Fukuda W,Yamada K,Miyoshi Y,Okuno H,Atomi H,Imanaka T

    更新日期:2012-08-01 00:00:00

  • Mucilaginibacter roseus sp. nov., isolated from a freshwater river.

    abstract::A bacterial strain, designated TTM-1T, was isolated from a water sample taken from the Caohu River in Taiwan and characterized in a taxonomic study using a polyphasic approach. Cells of strain TTM-1T were Gram-stain-negative, aerobic, non-motile, rod-shaped and covered by large capsules, and formed pink-coloured colon...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000838

    authors: Chen WM,Chen YL,Sheu SY

    更新日期:2016-03-01 00:00:00

  • Proposal of Verticiella gen. nov. as replacement for the illegitimate prokaryotic genus name Verticia Vandamme et al. 2015.

    abstract::The prokaryotic genus name Verticia Vandamme et al. 2015 is illegitimate because it is a later homonym of the insect genus name Verticia Malloch 1927 [Principle 2, Rule 51b(4) of the Prokaryotic Code (2008 Revision)]. This name is therefore not a correct name (Principle 6), and a replacement genus name must be propose...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001477

    authors: Vandamme PA

    更新日期:2016-12-01 00:00:00

  • Novosphingobium guangzhouense sp. nov., with the ability to degrade 1-methylphenanthrene.

    abstract::A novel Gram-stain-negative, flagellated, rod-shaped, yellow-pigmented aerobic bacterium, strain SA925T, that is capable of degrading 1-methylphenanthrene was isolated from oil-polluted soil collected from a refinery located in Guangzhou, China. Phylogenetic analysis based on the 16S rRNA gene sequence demonstrated th...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001669

    authors: Sha S,Zhong J,Chen B,Lin L,Luan T

    更新日期:2017-02-01 00:00:00

  • Chryseobacterium aquaticum sp. nov., isolated from a water reservoir.

    abstract::Strains 10-46(T) and 10-106 were isolated from a water reservoir in Korea. They were Gram-negative, non-motile, non-spore-forming rods, produced yellow-pigmented colonies on nutrient agar, contained MK-6 as the predominant menaquinone and 15 : 0 iso and 17 : 0 iso 3-OH as the major fatty acids and had polar lipid prof...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65491-0

    authors: Kim KK,Lee KC,Oh HM,Lee JS

    更新日期:2008-03-01 00:00:00

  • Microbacterium hydrothermale sp. nov., an actinobacterium isolated from hydrothermal sediment.

    abstract::A Gram-stain-positive, aerobic, non-motile, rod-shaped bacterium, strain 0704C9-2(T), was isolated from hydrothermal sediment of the Indian Ocean. The organism grew with 0-5% (w/v) NaCl and at 10-37 °C, with optimal growth occurring with 1% NaCl and at 28-30 °C. Comparative 16S rRNA gene sequence analysis revealed tha...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.061697-0

    authors: Zhang Y,Ren H,Zhang G

    更新日期:2014-10-01 00:00:00

  • Isolation, pure culture and characterization of Serratia symbiotica sp. nov., the R-type of secondary endosymbiont of the black bean aphid Aphis fabae.

    abstract::An intracellular symbiotic bacterium was isolated from the flora of a natural clone of the black bean aphid Aphis fabae. The strain was able to grow freely in aerobic conditions on a rich medium containing 1 % of each of the following substrates: glucose, yeast extract and casein peptone. Pure culture was achieved thr...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.024133-0

    authors: Sabri A,Leroy P,Haubruge E,Hance T,Frère I,Destain J,Thonart P

    更新日期:2011-09-01 00:00:00

  • Status of strains that contravene Rules 27 (3) and 30 of the International Code of Nomenclature of Bacteria. Opinion 81.

    abstract::Based on a list of 205 names proposed in original articles in the International Journal of Systematic and Evolutionary Microbiology or cited in Validation Lists from January 2001 that are not in accordance with Rules 27(3) and 30 of the International Code of Nomenclature of Bacteria (the Code), the Judicial Commission...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.2008/005264-0

    authors: Judicial Commission of the International Committee on Systematics of Prokaryotes.

    更新日期:2008-07-01 00:00:00

  • Phylogenetic analysis of Saccharothrix and related taxa: proposal for Actinosynnemataceae fam. nov.

    abstract::Partial sequences for 16S rDNA were determined for strains of the genus Saccharothrix, including most described species, as well as strains of the described species of the related genera Kutzneria, Actinokineospora and Actinosynnema. These were aligned with published sequences for other species of these genera, as wel...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-50-1-331

    authors: Labeda DP,Kroppenstedt RM

    更新日期:2000-01-01 00:00:00

  • Taxonomic evaluation of the Streptomyces griseus clade using multilocus sequence analysis and DNA-DNA hybridization, with proposal to combine 29 species and three subspecies as 11 genomic species.

    abstract::Streptomyces griseus and related species form the biggest but least well-defined clade in the whole Streptomyces 16S rRNA gene tree. Multilocus sequence analysis (MLSA) has shown promising potential for refining Streptomyces systematics. In this investigation, strains of 18 additional S. griseus clade species were ana...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.012419-0

    authors: Rong X,Huang Y

    更新日期:2010-03-01 00:00:00