Phylogenetic analysis of Saccharothrix and related taxa: proposal for Actinosynnemataceae fam. nov.

abstract：:A moderately halophilic, Gram-stain-negative, aerobic bacterium, strain D1-1T, belonging to the genus Halomonas, was isolated from soil sampled at Pentha beach, Odisha, India. Phylogenetic trees reconstructed based on 16S rRNA genes and multilocus sequence analysis of gyrB and rpoD genes revealed that strain D1-1T bel...

journal_title：International journal of systematic and evolutionary microbiology

authors： Pandiyan K,Kushwaha P,Bagul SY,Chakdar H,Madhaiyan M,Krishnamurthi S,Kumar P,Karthikeyan N,Singh A,Kumar M,Singh UB,Saxena AK

更新日期：2021-01-01 00:00:00

abstract：:Three strains, 002-048(T), RB589 and 002-051(T), isolated from field soil in Japan, were characterized using a polyphasic approach. The isolates were Gram-positive, strictly aerobic, non-motile rods that formed ellipsoidal, subterminal endospores. The chemotaxonomic characteristics of these isolates included the prese...

journal_title：International journal of systematic and evolutionary microbiology

authors： An SY,Asahara M,Goto K,Kasai H,Yokota A

更新日期：2007-01-01 00:00:00

abstract：:Two novel Actinobacteria, designated strains NEAU-YY421T and NEAU-YY642T, were isolated from the rhizosphere soil of wheat (Triticum aestivum L.) collected from Zhumadian, Henan Province, PR China and characterized using a polyphasic approach. Phylogenetic analyses based on 16S rRNA gene sequences showed that strains ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Han C,Yu Z,Zhao J,Shi H,Hu J,Yu B,Song J,Shen Y,Xiang W,Wang X

更新日期：2020-01-01 00:00:00

abstract：:Gram-stain-negative, facultatively anaerobic, non-motile, non-spore-forming, rod-shaped bacterium, designated strain HUA-2T, was isolated from an alginate-degrading microbial consortium. Strain HUA-2T was related to Dysgonomonas capnocytophagoides JCM 16697T, Dysgonomonas macrotermitis JCM 19375T and Dysgonomonas moss...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kita A,Miura T,Okamura Y,Aki T,Matsumura Y,Tajima T,Kato J,Nakashimada Y

更新日期：2015-10-01 00:00:00

abstract：:Two bacterial strains, designated MA1002(T) and MA1003(T), were isolated from the air-conditioning system of a car. Cells of both strains were Gram-reaction-positive, non-motile, non-spore-forming coccoids, catalase- and oxidase-positive and UV-radiation resistant. The major fatty acids of strain MA1002(T) were iso-C1...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kim DU,Lee H,Lee JH,Ahn JH,Lim S,Jeong S,Park SY,Seong CN,Ka JO

更新日期：2015-09-01 00:00:00

abstract：:A Gram-negative, aerobic bacterium, designated strain HO3-R19(T), which was isolated from seashore sand in Pohang city, Korea, was characterized on the basis of a polyphasic taxonomic approach. Phylogenetic analyses of 16S rRNA gene sequences revealed that strain HO3-R19(T) represents a new lineage within the Gammapro...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kwon SW,Kim BY,Weon HY,Baek YK,Go SJ

更新日期：2007-05-01 00:00:00

abstract：:A novel hyperthermophilic archaeon, designated strain SY1(T), was isolated from a deep-sea hydrothermal vent chimney sample collected from the Suiyo Seamount in the Izu-Bonin Arc, Japan, at a depth of 1385 m. The cells were irregular cocci (1.2 to 2.1 micro m in diameter), occurring singly or in pairs, and stained Gra...

journal_title：International journal of systematic and evolutionary microbiology

authors： Nakagawa S,Takai K,Horikoshi K,Sako Y

更新日期：2004-03-01 00:00:00

abstract：:In order to develop a detection method for the rice pathogens Burkholderia plantarii, Burkholderia glumae and Burkholderia gladioli, the phylogeny of six plant-pathogenic Burkholderia species was analysed using the combined nucleotide sequences of gyrB and rpoD. B. plantarii, B. glumae and B. gladioli formed tight mon...

journal_title：International journal of systematic and evolutionary microbiology

authors： Maeda Y,Shinohara H,Kiba A,Ohnishi K,Furuya N,Kawamura Y,Ezaki T,Vandamme P,Tsushima S,Hikichi Y

更新日期：2006-05-01 00:00:00

abstract：:A Gram-stain-negative, non-motile, coccus-shaped, catalase- and oxidase-positive, facultatively anaerobic and pink-pigmented bacterium, designated strain CQN31T, was isolated from sediment of Changqiaohai Lake, Yunnan Province, China. Growth occurred at 4-45 °C (optimum, 37 °C), at pH 6.5-9.5 (optimum, pH 8.0) and wit...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhang JY,Jiang XB,Zhu D,Wang XM,Du ZJ,Mu DS

更新日期：2020-10-01 00:00:00

abstract：:A Gram-negative, aerobic, motile and rod-shaped bacterium, designated strain T7-07(T), was isolated from compost in Daejeon, Korea. Phylogenetic analysis based on 16S rRNA gene sequencing showed that strain T7-07(T) had 99.0% gene sequence similarity with Arenimonas malthae KACC 14618(T) and 94.7-95.9% with other reco...

journal_title：International journal of systematic and evolutionary microbiology

authors： Jin L,Kim KK,An KG,Oh HM,Lee ST

更新日期：2012-07-01 00:00:00

abstract：:An anaerobic, thermophilic, syntrophic propionate-oxidizing bacterium, strain SI(T), isolated previously from granular sludge in a thermophilic upflow anaerobic sludge blanket (UASB) reactor, was characterized. The strain could grow fermentatively on pyruvate and fumarate in pure culture. The strain grew on propionate...

journal_title：International journal of systematic and evolutionary microbiology

authors： Imachi H,Sekiguchi Y,Kamagata Y,Hanada S,Ohashi A,Harada H

更新日期：2002-09-01 00:00:00

abstract：:A novel aerobic, gram-negative bacterial strain, designated 17X/A02/237(T), was isolated from waters of the coastal north-western Mediterranean Sea. Cells were motile straight rods and formed dark-grey colonies on marine agar medium. Strain 17X/A02/237(T) contained ubiquinone Q-8 and its major fatty acids were C(16 : ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Urios L,Intertaglia L,Lesongeur F,Lebaron P

更新日期：2011-07-01 00:00:00

abstract：:The purpose of this announcement is to effect the valid publication of the following effectively published new names and new combinations under the procedure described in the Bacteriological Code (1990 Revision). Authors and other individuals wishing to have new names and/or combinations included in future lists shoul...

journal_title：International journal of systematic and evolutionary microbiology

authors： Oren A,Garrity GM

更新日期：2016-11-01 00:00:00

abstract：:Two halophilic archaeal strains, Q85(T) and Q86, were isolated from a subterranean salt mine in Yunnan, China. Cells were rod-shaped, Gram-stain-negative and motile. Colonies were red, smooth, convex and round (1.0-2.0 mm in diameter). The orthologous 16S rRNA and rpoB9 gene sequences of these two strains were almost ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Chen S,Liu HC,Zhao D,Yang J,Zhou J,Xiang H

更新日期：2015-12-01 00:00:00

abstract：:A Gram-stain-negative, non-spore-forming, motile, aerobic, rod-shaped bacteria strain, designated LCB8T, was isolated from the insect Teleogryllus occipitalis captured from a deserted cropland in Shuangliu district, Chengdu, PR China. Phylogenetic analysis on the basis of 16S rRNA gene sequence indicated that the stra...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hu M,Li X,Li Z,Liu B,Yang Z,Tian Y

更新日期：2020-04-01 00:00:00

abstract：:A Gram-staining-positive, motile, facultatively anaerobic, endospore-forming and rod-shaped bacterium, designated strain CJ32(T), was isolated from ginseng soil at Geumsan in Korea. The isolate grew optimally at 30 °C, 2% (w/v) NaCl and pH 7.0. Colonies of strain CJ32(T) were beige and circular with an entire margin o...

journal_title：International journal of systematic and evolutionary microbiology

authors： Choi JH,Cha CJ

更新日期：2014-03-01 00:00:00

abstract：:A novel bacterial strain, designated T8T, isolated from ripened Pu'er tea, was investigated by using a polyphasic taxonomic approach. Cells stained Gram-positive and were aerobic, sporogenous and rod-shaped with flagella. Phylogenetic analysis of 16S rRNA gene sequences revealed the strain belonged to the family Bacil...

journal_title：International journal of systematic and evolutionary microbiology

authors： Wang D,Xiang Y,Jiang C,Zhang J,Hua Z,Niu L,Luo L

更新日期：2018-09-01 00:00:00

abstract：:A novel Gram-stain-positive bacterium designated CMU-NKS-70T was isolated from a subterranean termite nest and characterized using a polyphasic approach. The strain exhibited branching, pinkish-cream aerial mycelium and cream-brown substrate mycelium, and formed chains of rod-like spores. The 16S rRNA gene sequence an...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sujarit K,Sujada N,Kudo T,Ohkuma M,Pathom-Aree W,Lumyong S

更新日期：2017-08-01 00:00:00

abstract：:An aerobic bacterial strain, designated XJ-2T, was isolated from a soil sample collected from Gurbantunggut Sandy Desert in PR China. Cells of strain XJ-2T were Gram-stain-negative, non-motile, rod-shaped and non-spore-forming. The new isolate grew well at 10-37 °C (optimum, 28-30 °C), pH 6.0-11.0 (pH 7.0) and 0-1 % (...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kong XK,Chen D,Huang JW,Cheng XK,Jiang JD

更新日期：2019-06-01 00:00:00

abstract：:Five bacterial isolates were recovered from dermatitis or organ lesions of five agamid lizards. Three strains were recovered from Uromastyx species with dermatitis or septicaemia. All five isolates were Gram-positive small rods that could not be identified using conventional phenotypic systems. They grew on sheep bloo...

journal_title：International journal of systematic and evolutionary microbiology

authors： Martel A,Pasmans F,Hellebuyck T,Haesebrouck F,Vandamme P

更新日期：2008-09-01 00:00:00

abstract：:The Judicial Commission affirms that the genus name Sinorhizobium Chen et al. 1988 is a later synonym of Ensifer Casida 1982, and that the former genus name is not conserved over the latter genus name. The species name 'Sinorhizobium adhaerens' is not validly published. ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Judicial Commission of the International Committee on Systematics of Prokaryotes.

更新日期：2008-08-01 00:00:00

abstract：:A halophilic actinomycete strain, designated YIM 90500(T), was isolated from a saline lake in Xinjiang province, north-west China and subjected to a polyphasic taxonomic study. Good growth of the novel isolate occurred at 28-37 degrees C, pH 7-8 and with 10-15 % (w/v) NaCl; no growth occurred without any salts. Strain...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tang SK,Wang Y,Cai M,Zhi XY,Lou K,Xu LH,Jiang CL,Li WJ

更新日期：2009-03-01 00:00:00

abstract：:Fifty-eight new isolates were obtained from root nodules of common bean (Phaseolus vulgaris) cultivated in soils originating from different agroecological areas in Senegal and Gambia (West Africa). A polyphasic approach including both phenotypic and genotypic techniques was used to study the diversity of the 58 Rhizob...

journal_title：International journal of systematic and evolutionary microbiology

authors： Diouf A,de Lajudie P,Neyra M,Kersters K,Gillis M,Martinez-Romero E,Gueye M

更新日期：2000-01-01 00:00:00

abstract：:A gram-negative, spiral or rod-shaped, non-spore-forming diazotrophic bacterium, designated CC-Nfb-7(T), was isolated from agricultural soil in Yunlin County, Taiwan. 16S rRNA gene sequence analysis showed that strain CC-Nfb-7(T) was most closely related to Azospirillum brasilense DSM 1690(T) (97.4 % 16S rRNA gene seq...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lin SY,Shen FT,Young LS,Zhu ZL,Chen WM,Young CC

更新日期：2012-05-01 00:00:00

abstract：:A pink-pigmented, aerobic, facultatively methylotrophic bacterium, strain BJ001T, was isolated from internal poplar tissues (Populus deltoidesxnigra DN34) and identified as a member of the genus Methylobacterium. Phylogenetic analyses showed that strain BJ001T is related to Methylobacterium thiocyanatum, Methylobacter...

journal_title：International journal of systematic and evolutionary microbiology

authors： Van Aken B,Peres CM,Doty SL,Yoon JM,Schnoor JL

更新日期：2004-07-01 00:00:00

abstract：:Strain 06168H-1T was isolated from a fishpond sediment sample collected from the southern area of Taiwan, and a polyphasic approach was used to determine its taxonomic position. The isolate grew between 20-40 °C and 0-8 % (w/v) NaCl. It produced branched and unfragmented substrate mycelia. Short spore chains (3-10 spo...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tseng M,Chiang WP,Liao HC,Hsieh SY,Yuan GF

更新日期：2018-05-01 00:00:00

abstract：:The genus Leptospira currently comprises 16 named species. In addition, four unnamed hybridization groups were designated Leptospira genomospecies 1, 3, 4 and 5. These groups represent valid species-level taxa, but were not assigned names in the original description by Brenner et al. [Int J Syst Bacteriol 49, 839-858 ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Smythe L,Adler B,Hartskeerl RA,Galloway RL,Turenne CY,Levett PN,The International Committee On Systematics Of Prokaryotes Subcommittee On The Taxonomy Of

更新日期：2013-05-01 00:00:00

abstract：:Four strains of aerobic, Gram-negative rods, motile by means of a single polar flagellum, that produced phenolic anti-methicillin-resistant Staphylococcus aureus (MRSA) substances and brown-pigmented colonies, were isolated from sea water. The G + C content of the DNA ranged from 39.9 to 40.6 mol%. The isolates grew a...

journal_title：International journal of systematic and evolutionary microbiology

authors： Isnansetyo A,Kamei Y

更新日期：2003-03-01 00:00:00

abstract：:A novel non-sporulating, non-motile, catalase- and oxidase-positive, strictly aerobic, Gram-negative, rod-shaped bacterial strain, designated DCA-1(T), was isolated from activated sludge collected from a butachlor wastewater treatment facility. The strain was able to degrade about 85 % of 100 mg butachlor l(-1) within...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zheng JW,Chen YG,Zhang J,Ni YY,Li WJ,He J,Li SP

更新日期：2011-08-01 00:00:00

abstract：:Strain 7SM30(T)(,) an aerobic marine, Gram-negative, heterotrophic and yellow- to orange-pigmented bacterium isolated from seawater from Castellón, Spain, was characterized using a polyphasic approach. Analysis of the 16S rRNA gene sequence showed that the isolate represented a novel lineage within the family Flavobac...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lucena T,Pascual J,Giordano A,Gambacorta A,Garay E,Arahal DR,Macián MC,Pujalte MJ

更新日期：2010-12-01 00:00:00