Shewanella japonica sp. nov.

abstract：:A Gram-stain-negative bacterium, strain 5410S-62T, was isolated from an air sample collected in Suwon, Republic of Korea. It was aerobic, motile, mesophilic and formed rod-shaped cells. Colonies on R2A agar were convex, circular and pale orange with entire margins. Growth occurred at pH 5-9 (optimally at pH 7) and at ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kim SJ,Moon JY,Weon HY,Hong SB,Seok SJ,Kwon SW

更新日期：2014-05-01 00:00:00

abstract：:Thirty-two protein-encoding genes that are distributed widely among bacterial genomes were tested for the potential usefulness of their DNA sequences in assigning bacterial strains to species. From publicly available data, it was possible to make 49 pairwise comparisons of whole bacterial genomes that were related at ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zeigler DR

更新日期：2003-11-01 00:00:00

abstract：:Two aerobic, psychrohalotolerant, motile bacterial isolates, CK13T and CK16, isolated from sea-water samples collected off the subantarctic Kerguelen island, were characterized by using a polyphasic taxonomic approach. On the basis of 16S rRNA gene sequence data, the strains were 99.6% similar and exhibited 93-97% sim...

journal_title：International journal of systematic and evolutionary microbiology

authors： Gupta P,Chaturvedi P,Pradhan S,Delille D,Shivaji S

更新日期：2006-02-01 00:00:00

abstract：:Two strains of strictly aerobic, moderately halophilic Gram-positive rods were isolated from fermented shrimp paste ('ka-pi') produced in Thailand. They produced a red pigment and grew optimally in the presence of 5-30 % NaCl. The diagnostic diamino acid in the cell-wall peptidoglycan was meso-diaminopimelic acid. The...

journal_title：International journal of systematic and evolutionary microbiology

authors： Pakdeeto A,Tanasupawat S,Thawai C,Moonmangmee S,Kudo T,Itoh T

更新日期：2007-02-01 00:00:00

abstract：:Nine Burkholderia cepacia complex (Bcc) bacteria were isolated during environmental surveys for the ecological niche of Burkholderia pseudomallei, the aetiological agent of melioidosis, in the Northern Territory of Australia. They represented two multi-locus sequence analysis-based clusters, referred to as Bcc B and B...

journal_title：International journal of systematic and evolutionary microbiology

authors： De Smet B,Mayo M,Peeters C,Zlosnik JEA,Spilker T,Hird TJ,LiPuma JJ,Kidd TJ,Kaestli M,Ginther JL,Wagner DM,Keim P,Bell SC,Jacobs JA,Currie BJ,Vandamme P

更新日期：2015-07-01 00:00:00

abstract：:A novel aerobic, non-motile, Gram-negative bacterium, designated AS06/20a(T), was isolated from coastal waters of the Adriatic Sea and subjected to polyphasic taxonomic analysis. Cells were rod-shaped and formed non-pigmented punctiform colonies on agar plates. The novel isolate grew heterotrophically on a variety of ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Alain K,Intertaglia L,Catala P,Lebaron P

更新日期：2008-10-01 00:00:00

abstract：:A taxonomic study was performed on strain SYSU D3-2T, isolated from coastal seawater near the estuary of Pearl River in southern China. The strain was observed to be Gram-reaction-negative, non-motile and non-spore-forming. Cells were found to be of coccobacilli shape. Chemotaxonomic analysis of the plasma membrane re...

journal_title：International journal of systematic and evolutionary microbiology

authors： Liu L,Salam N,Jiao JY,E SM,Chen C,Fang BZ,Xiao M,Li M,Li WJ,Qu PH

更新日期：2017-07-01 00:00:00

abstract：:Three strains of the marine, gliding, pigmented, facultatively anaerobic, heterotrophic, Gram-negative bacteria were isolated from the green algae Acrosiphonia sonderi (Kütz) Kornm and Ulva fenestrata Ruprecht inhabiting the Sea of Japan. 16S rDNA sequence analysis indicated that the strains were members of the family...

journal_title：International journal of systematic and evolutionary microbiology

authors： Nedashkovskaya OI,Kim SB,Han SK,Rhee MS,Lysenko AM,Rohde M,Zhukova NV,Frolova GM,Mikhailov VV,Bae KS

更新日期：2004-07-01 00:00:00

abstract：:Two rod-shaped, slightly halophilic and extremely halotolerant bacterial strains (X-1125T and X-1174), which were Gram-stain-positive, facultatively anaerobic and motile with peritrichous flagella, were isolated from the faeces of Tibetan antelopes. Their optimal temperature, NaCl concentration and pH for growth were ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Wang X,Yang J,Lu S,Lai XH,Jin D,Pu J,Niu L,Zhu W,Liang J,Huang Y,Wang B,Wu X,Liang H,Xu J

更新日期：2019-05-01 00:00:00

abstract：:Strains PRI 2268 and PRI 3838(T) were isolated from two separate hot springs in the Torfajokull geothermal area of South Iceland. The cells were non-motile rods, approximately 0.3 microm in width and 1.5-2.5 microm in length. Electron microscopy revealed a Gram-negative cell-wall structure. The strains grew at 45-79 d...

journal_title：International journal of systematic and evolutionary microbiology

authors： Bjornsdottir SH,Petursdottir SK,Hreggvidsson GO,Skirnisdottir S,Hjorleifsdottir S,Arnfinnsson J,Kristjansson JK

更新日期：2009-12-01 00:00:00

abstract：:This volume contains the edition of the International Code of Nomenclature of Prokaryotes that was presented in draft form and available for comment at the Plenary Session of the Fourteenth International Congress of Bacteriology and Applied Microbiology (BAM), Montréal, 2014, together with updated lists of conserved a...

journal_title：International journal of systematic and evolutionary microbiology

authors：

更新日期：2019-01-01 00:00:00

abstract：:Two novel facultatively anaerobic bacterial strains, BL-34(T) and BL-35, isolated from groundwater contaminated by a mixture of chlorosolvents were characterized using a polyphasic approach. The two strains exhibited essentially identical taxonomic features except for a vitamin B(12) requirement by strain BL-35 for op...

journal_title：International journal of systematic and evolutionary microbiology

authors： Bae HS,Moe WM,Yan J,Tiago I,da Costa MS,Rainey FA

更新日期：2006-08-01 00:00:00

abstract：:Following the exposure of a biofilm sample from a hydrothermal spring cave (Gellért Hill, Budapest, Hungary) to gamma radiation, a strain designated FeSTC15-38T was isolated and studied by polyphasic taxonomic methods. The spherical-shaped cells stained Gram-negative, and were aerobic and non-motile. The pH range for ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Makk J,Tóth EM,Anda D,Pál S,Schumann P,Kovács AL,Mádl-Szőnyi J,Márialigeti K,Borsodi AK

更新日期：2016-12-01 00:00:00

abstract：:A novel actinomycete, designated WYY166T, was isolated from the rhizosphere of Suaeda australis Moq. collected in Dongfang, PR China. The taxonomic position of this strain was investigated using a polyphasic approach. Phylogenetic analysis based on its 16S rRNA gene referred strain WYY166T to the genus Nonomuraea, and...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ou Y,Sheng Y,Hu X,Leng D,Huang J,Hu Z,Bai L,Deng Z,Kang Q,Wu Y

更新日期：2020-09-01 00:00:00

abstract：:A coccal-shaped organism, designated 516(T), was isolated from yan-tsai-shin (fermented broccoli stems), a traditional fermented food in Taiwan. 16S rRNA gene sequencing results showed that strain 516(T) had 98.9 % sequence similarity to that of the type strain Lactococcus garvieae NBRC 100934(T). Comparison of three ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Chen YS,Otoguro M,Lin YH,Pan SF,Ji SH,Yu CR,Liou MS,Chang YC,Wu HC,Yanagida F

更新日期：2014-01-01 00:00:00

abstract：:Two groups of haloalkaliphilic methanogenic archaea were dominating in enrichments from hypersaline soda lake sediments at pH 10. At moderate salt concentrations with formate or H2 as electron donor, methanogens belonging to the genus Methanocalculus were enriched, while at high salt concentrations with methylated sub...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sorokin DY,Abbas B,Merkel AY,Rijpstra WIC,Damsté JSS,Sukhacheva MV,van Loosdrecht MCM

更新日期：2015-10-01 00:00:00

abstract：:Three rod-shaped halophilic archaeal strains, DL-M4T, LYG-109 and DLLS-108T, were isolated from the salted brown alga Laminaria produced in different marine areas of PR China. Cells of strains were motile, formed red-pigmented colonies on agar and lysed in distilled water. The three strains grew optimally with 2.6 M N...

journal_title：International journal of systematic and evolutionary microbiology

authors： Han D,Cui HL

更新日期：2020-03-01 00:00:00

abstract：:A novel Gram-stain-negative, rod-shaped marine bacterium, designated as strain O448T, was isolated from the coastal area of Weihai, China (122° 14' E, 36° 54' N). Cells of strain O448T were non-motile, aerobic, approximately 0.4-0.6 µm wide and 1.5-2.0 µm long. Growth occurred at 20-40 °C (optimally between 33-37 °C),...

journal_title：International journal of systematic and evolutionary microbiology

authors： Chang YQ,Meng X,Du ZZ,Du ZJ

更新日期：2019-01-01 00:00:00

abstract：:An actinomycete, strain 2602GPT1-05(T), was isolated from a composite mangrove soil sample collected from Wenchang, Hainan province, China. Strain 2602GPT1-05(T) showed closest 16S rRNA gene sequence similarity to Micromonospora haikouensis 232617(T) (99.05 %), and phylogenetically clustered with Micromonospora haikou...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ren J,Li L,Wei B,Tang YL,Deng ZX,Sun M,Hong K

更新日期：2013-07-01 00:00:00

abstract：:One strain of a novel genus and species of the order Planctomycetes, designated FC18T, was isolated from the epiphytic community of Fucusspiralis. This strain was non-pigmented in medium M13 but was slightly pink pigmented on medium M14, containing four-fold the levels of glucose, peptone and yeast extract of M13. The...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lage OM,Albuquerque L,Lobo-da Cunha A,da Costa MS

更新日期：2017-05-01 00:00:00

abstract：:The taxonomic positions of Microterricola viridarii JCM 15926T, Phycicola gilvus DSM 18319T and Leifsonia pindariensis JCM 15132T were re-examined. Phylogenetic analysis and 16S rRNA gene sequence similarities revealed that all three strains are closely related with each other and form a monophyletic cluster with high...

journal_title：International journal of systematic and evolutionary microbiology

authors： Dhotre DP,Rajabal V,Sharma A,Kulkarni GJ,Prakash O,Vemuluri VR,Joseph N,Rahi P,Shouche YS

更新日期：2017-08-01 00:00:00

abstract：:A Gram-negative, rod-shaped, moderately halophilic bacterium, designated strain YIM 91118(T), motile with a single polar flagellum, was isolated from Xinjiang province in north-west China and subjected to a polyphasic taxonomic study. Strain YIM 91118(T) grew optimally at 37 degrees C, pH 7.0-8.0 and 10% NaCl (w/v). I...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tang SK,Wang Y,Cai M,Lou K,Mao PH,Jin X,Jiang CL,Xu LH,Li WJ

更新日期：2008-09-01 00:00:00

abstract：:A taxonomic study was carried out on a Gram-stain-negative bacterium, namely strain ANRC-JH13T, isolated from a sediment sample collected at Jasper beach, adjacent to Fildes Peninsula, Antarctica. Cells of strain ANRC-JH13T were non-spore-forming rods and motile by the way of flagellum. Strain ANRC-JH13T was facultati...

journal_title：International journal of systematic and evolutionary microbiology

authors： Han X,Zhang J,Zhang Y,Liu J,Fang W,Fang Z,Xiao Y

更新日期：2019-06-01 00:00:00

abstract：:A novel, Gram-stain-negative, non-motile, rod-shaped yellow bacterium, designated VBW088(T) was isolated from a shallow water hydrothermal vent in Espalamaca in the Azores. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain VBW088(T) clustered with three type strains of species of the genus Vite...

journal_title：International journal of systematic and evolutionary microbiology

authors： Rajasabapathy R,Mohandass C,Yoon JH,Dastager SG,Liu Q,Khieu TN,Son CK,Li WJ,Colaço A

更新日期：2015-02-01 00:00:00

abstract：:Strains of Gram-stain-negative, anaerobic, rod-shaped bacteria were isolated from chinchilla (Chinchilla lanigera) faeces, and strain ST166(T) was investigated taxonomically. Phylogenetic analyses of 16S rRNA gene sequences revealed that strain ST166(T) belonged to the genus Parabacteroides. Strain ST166(T) formed a d...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kitahara M,Sakamoto M,Tsuchida S,Kawasumi K,Amao H,Benno Y,Ohkuma M

更新日期：2013-09-01 00:00:00

abstract：:A novel halophilic, filamentous actinomycete strain, designated AFM 10258T, was isolated from a sediment sample collected from the Dead Sea of Israel. The isolate grew with 10-35 % NaCl and did not grow without NaCl. The isolate formed white aerial mycelium and long spore chains, and two spores were separated by steri...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lai H,Jiang Y,Chen X,Li Q,Jiang C,Jiang Y,Wei X

更新日期：2017-05-01 00:00:00

abstract：:A polyphasic taxonomic approach was used to characterize a Gram-stain-positive bacterium, designated strain CC-CFT486T, isolated from soil sampled in a maize field in Taiwan. Cells of strain CC-CFT486T were short rods, motile with polar flagella, catalase-positive and oxidase-positive. Optimal growth occurred at 30 °С...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lin SY,Tsai CF,Hameed A,Young CC

更新日期：2021-01-05 00:00:00

abstract：:A polyphasic approach was used to investigate the taxonomic status of two bacterial strains, WS 5072T and WS 5092, isolated from skimmed milk concentrate and raw cow's milk. The 16S rRNA and rpoD gene sequences affiliated the strains to the same, hitherto unknown, Pseudomonas species. Further examinations of the draft...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hofmann K,Huptas C,Doll EV,Scherer S,Wenning M

更新日期：2020-02-01 00:00:00

abstract：:Detection, identification and classification of yeasts have undergone a major transformation in the past decade and a half following application of gene sequence analyses and genome comparisons. Development of a database (barcode) of easily determined gene sequences from domains 1 and 2 (D1/D2) of large subunit rRNA a...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kurtzman CP

更新日期：2014-02-01 00:00:00

abstract：:Eleven strains of anaerobic Gram-negative bacilli isolated from the human oral cavity were subjected to a comprehensive range of phenotypic and genotypic tests and were found to comprise two homogeneous groups, designated E2 and E4. 16S rRNA gene sequence analysis revealed that members of both groups belonged to the g...

journal_title：International journal of systematic and evolutionary microbiology

authors： Downes J,Sutcliffe I,Tanner ACR,Wade WG

更新日期：2005-07-01 00:00:00