Use of gene sequence analyses and genome comparisons for yeast systematics.

abstract：:An aerobic, yellow-orange-pigmented, Gram-staining-negative bacterium, designated strain EM44(T), was isolated from seawater on the eastern coast of Jeju Island, Korea. Growth was observed at 15-35 degrees C (optimum 25-30 degrees C), pH 6.5-9.0 (optimum pH 7.0-8.5) and between 1 and 5 % NaCl (w/v) (optimum 2-4 %). Ce...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kahng HY,Lee SS,Kim JM,Jung JY,Lee MY,Park W,Jeon CO

更新日期：2010-07-01 00:00:00

abstract：:Two Gram-negative, motile, aerobic bacterial strains, designated B2(T) and 1_C16_27(T), were respectively isolated from a seawater sample collected from the East China Sea and a semi-coke sample from north-eastern Estonia. Their genetic, phenotypic and chemotaxonomic properties were studied. The isolates were short ro...

journal_title：International journal of systematic and evolutionary microbiology

authors： Xu XW,Huo YY,Wang CS,Oren A,Cui HL,Vedler E,Wu M

更新日期：2011-08-01 00:00:00

abstract：:Two strains of Gram-negative, aerobic, non-pigmented, non-motile, rod-shaped bacteria were isolated from beechwood blocks during decay by the white-rot fungus Hypholoma fasciculare and were designated strains BW863(T) and BW872. They are capable of methylotrophic growth and assimilate carbon via the ribulose-bisphosph...

journal_title：International journal of systematic and evolutionary microbiology

authors： Vorob'ev AV,de Boer W,Folman LB,Bodelier PL,Doronina NV,Suzina NE,Trotsenko YA,Dedysh SN

更新日期：2009-10-01 00:00:00

abstract：:A strictly anaerobic, thermophilic bacterium, designated strain AeB(T), was isolated from microbial mats colonizing a run-off channel formed by free-flowing thermal water from a bore well (registered number 17263) of the Great Artesian Basin, Australia. Cells of strain AeB(T) were slightly curved rods (2.5-6.0x1.0 mum...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ogg CD,Patel BKC

更新日期：2010-06-01 00:00:00

abstract：:A Gram-negative, rod-shaped, strictly aerobic micro-organism, designated strain CL-GR60(T), was isolated from coastal seawater from the East Sea, Korea. A 16S rRNA gene sequence analysis revealed a clear affiliation with the family Hyphomicrobiaceae. Phylogenetic analyses showed that strain CL-GR60(T) formed a robust ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hwang CY,Cho BC

更新日期：2008-07-01 00:00:00

abstract：:A Gram-reaction-positive, non-spore-forming, rod-shaped, non-motile, β-glucosidase-producing bacterium, designated DCY51(T), was isolated from kimchi, a Korean fermented vegetable food. 16S rRNA gene sequence analysis revealed that strain DCY51(T) belonged to the genus Lactobacillus and exhibited highest 16S rRNA gene...

journal_title：International journal of systematic and evolutionary microbiology

authors： Liang ZQ,Srinivasan S,Kim YJ,Kim HB,Wang HT,Yang DC

更新日期：2011-04-01 00:00:00

abstract：:A novel acidothermophilic archaeon, strain Ar-4(T), was isolated from a sulfuric hot spring in Tengchong, Yunnan, China. Cells of strain Ar-4(T) were Gram-staining-negative, irregular cocci and motile by means of flagella. Strain Ar-4(T) grew over a temperature range of 55-75 °C (optimum, 65 °C), a pH range of 2.5-5.5...

journal_title：International journal of systematic and evolutionary microbiology

authors： Liu LJ,You XY,Guo X,Liu SJ,Jiang CY

更新日期：2011-10-01 00:00:00

abstract：:A rod-shaped, Gram-negative, non-motile, aerobic and non-endospore forming bacterium, designated strain DD-13(T), was isolated from the mangrove ecosystem of Goa, India. Strain DD-13(T) degraded polysaccharides such as agar, alginate, chitin, cellulose, laminarin, pectin, pullulan, starch, carrageenan, xylan and β-glu...

journal_title：International journal of systematic and evolutionary microbiology

authors： Vashist P,Nogi Y,Ghadi SC,Verma P,Shouche YS

更新日期：2013-07-01 00:00:00

abstract：:A rod-shaped, phototrophic, purple sulfur bacterium was isolated in pure culture from brackish water near Bheemli, Visakhapatnam, India, in a medium that contained 2 % NaCl (w/v). Strain JA144(T) was Gram-negative and motile. It did not require salt, but tolerated up to 3 % NaCl (w/v). Intracellular photosynthetic mem...

journal_title：International journal of systematic and evolutionary microbiology

authors： Srinivas TN,Anil Kumar P,Sucharitha K,Sasikala Ch,Ramana ChV

更新日期：2009-04-01 00:00:00

abstract：:In order to develop a detection method for the rice pathogens Burkholderia plantarii, Burkholderia glumae and Burkholderia gladioli, the phylogeny of six plant-pathogenic Burkholderia species was analysed using the combined nucleotide sequences of gyrB and rpoD. B. plantarii, B. glumae and B. gladioli formed tight mon...

journal_title：International journal of systematic and evolutionary microbiology

authors： Maeda Y,Shinohara H,Kiba A,Ohnishi K,Furuya N,Kawamura Y,Ezaki T,Vandamme P,Tsushima S,Hikichi Y

更新日期：2006-05-01 00:00:00

abstract：:This volume contains the edition of the International Code of Nomenclature of Prokaryotes that was presented in draft form and available for comment at the Plenary Session of the Fourteenth International Congress of Bacteriology and Applied Microbiology (BAM), Montréal, 2014, together with updated lists of conserved a...

journal_title：International journal of systematic and evolutionary microbiology

authors：

更新日期：2019-01-01 00:00:00

abstract：:Several extremely halophilic coccoid archaeal strains were isolated from pieces of dry rock salt that were obtained three days after blasting operations in an Austrian salt mine. The deposition of the salt is thought to have occurred during the Permian period (225-280 million years ago). On the basis of their polar-li...

journal_title：International journal of systematic and evolutionary microbiology

authors： Stan-Lotter H,Pfaffenhuemer M,Legat A,Busse HJ,Radax C,Gruber C

更新日期：2002-09-01 00:00:00

abstract：:A novel strictly anaerobic bacterium, designated strain BA2-13T, was isolated from a thermophilic industrial-scale biogas plant. Cells were rod-shaped and Gram-stain-positive. Growth occurred at temperatures of 25 to 50 °C and between pH 6.3 and 9.5. Strain BA2-13T produced indole. Cell growth was stimulated by yeast ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hahnke S,Langer T,Klocke M

更新日期：2018-03-01 00:00:00

abstract：:This study examined over 20 fungal specimens of the Orbiliaceae (Orbiliomycetes) from different regions in China. Our analyses based on morphological traits and the ITS rDNA sequences revealed two new Orbilia species with drechslerella-like asexual morphs. These new species are able to trap nematodes with constricting...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhang Y,Qiao M,Baral HO,Xu J,Zhang KQ,Yu ZF

更新日期：2020-04-01 00:00:00

abstract：:A Gram-stain-negative, aerobic, motile and rod-shaped or ovoid bacterial strain, designated YSM-23T, was isolated from a tidal flat on the South Sea in South Korea, and subjected to a polyphasic taxonomic study. Strain YSM-23T grew optimally at 30 °C, at pH 7.0-8.0 and in the presence of 1.0-2.0 % (w/v) NaCl. The phyl...

journal_title：International journal of systematic and evolutionary microbiology

authors： Park S,Jung YT,Yoon JH

更新日期：2016-09-01 00:00:00

abstract：:The generic position of an actinomycete strain, 'Pseudonocardia sp.' IMSNU 22139, was investigated by the phylogenetic analysis of 16S rDNA sequence. Comparative studies of 16S rDNA sequences indicated that this organism consistently formed a distinct clade within the radiation of the genus Amycolatopsis of the family...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee SD,Hah YC

更新日期：2001-03-01 00:00:00

abstract：:A Gram-negative, non-motile, rod-shaped bacterial strain, DS-57T, was isolated from soil from Dokdo, Korea, and its taxonomic position was investigated using a polyphasic approach. It grew optimally at 25 degrees C and in trypticase soy broth without NaCl and trypticase soy broth with 0.5% NaCl. Strain DS-57T containe...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yoon JH,Kang SJ,Oh TK

更新日期：2007-11-01 00:00:00

abstract：:A Gram-staining-negative, non-motile, catalase- and oxidase-positive strain, designated MS7(T), was isolated from freshwater of a river near Trabzon, Turkey. Its taxonomy was investigated using a polyphasic approach. The strain grew optimally at 28 °C and pH 7.5 and in the presence of 2.0% NaCl. 16S rRNA gene sequence...

journal_title：International journal of systematic and evolutionary microbiology

authors： Inan K,Kacagan M,Ozer A,Osman Belduz A,Canakci S

更新日期：2015-07-01 00:00:00

abstract：:A Gram-stain-positive, aerobic, motile, rod-shaped, endospore-forming bacterium, designated strain R55T, was isolated from the liverwort Herbertus sendtneri growing at Gawalong glacier, Tibet, and characterized by using a polyphasic taxonomic approach. The major fatty acids of strain R55T were anteiso-C15 : 0, C16 : 0...

journal_title：International journal of systematic and evolutionary microbiology

authors： Guo GN,Zhou X,Chen ZL,Yang ZW,Li XD,Li YH

更新日期：2016-02-01 00:00:00

abstract：:A mesophilic, acidophilic, spore-forming bacterium, strain 105-2(T), was isolated from an acidic Sphagnum peat bog in Wisconsin, USA. Strain 105-2(T) has 16S rRNA gene sequence similarity to Bacillus sporothermodurans DSM 10599(T) and Bacillus oleronius DSM 9356(T) of 97.4 and 97.8%, respectively. The primary lipoquin...

journal_title：International journal of systematic and evolutionary microbiology

authors： Albert RA,Archambault J,Rosselló-Mora R,Tindall BJ,Matheny M

更新日期：2005-09-01 00:00:00

abstract：:A Gram-stain-negative, aerobic, motile, rod-shaped or ovoid bacterial strain, designated DB-2T, was isolated from a tidal flat of the Yellow Sea in South Korea, and subjected to a taxonomic study using a polyphasic approach. Strain DB-2T grew optimally at 30 °C, at pH 7.0-8.0 and in the presence of 2.0-3.0 % (w/v) NaC...

journal_title：International journal of systematic and evolutionary microbiology

authors： Park S,Jung YT,Park DS,Yoon JH

更新日期：2016-05-01 00:00:00

abstract：:A coccoid actinobacterium strain (designated YIM 70178(T)) was isolated from a soil sample collected in Qinghai Province, China. The isolate grew well with an optimum salt concentration of 10-15% (KCl, w/v) but scarcely or not at all without salt. The cell-wall peptidoglycan type was A4alpha, L-Lys-gly-L-Glu. The majo...

journal_title：International journal of systematic and evolutionary microbiology

authors： Li WJ,Schumann P,Zhang YQ,Xu P,Chen GZ,Xu LH,Stackebrandt E,Jiang CL

更新日期：2005-09-01 00:00:00

abstract：:During the course of a study on the xylan-degrading community from the human gut, six xylanolytic, Gram-negative, anaerobic rods were isolated from faecal samples. 16S rRNA gene sequence analysis showed that the isolates were closely related to each other (> or =99 % sequence similarity) and that they belonged to the ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Chassard C,Delmas E,Lawson PA,Bernalier-Donadille A

更新日期：2008-04-01 00:00:00

abstract：:A novel anaerobic, mesophilic, hydrogen-producing bacterium, designated strain M2/40(T), was isolated from a mesophilic, two-phase, laboratory-scale biogas reactor fed continuously with maize silage supplemented with 5% wheat straw. 16S rRNA gene sequence comparison revealed an affiliation to the genus Clostridium sen...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hahnke S,Striesow J,Elvert M,Mollar XP,Klocke M

更新日期：2014-08-01 00:00:00

abstract：:Two novel actinobacteria, designated YIM 121936T and YIM 121940T, were isolated from alkaline sediment in Yuanjiang, China. The cells of the novel strains were Gram-stain-positive, aerobic, motile, non-spore-forming and coccus-shaped. The two strains both contained meso-diaminopimelic acid as the diagnostic diamino ac...

journal_title：International journal of systematic and evolutionary microbiology

authors： Xu FJ,Li QY,Li GD,Chen X,Jiang Y,Jiang CL

更新日期：2017-11-01 00:00:00

abstract：:Three thermo-tolerant halophilic archaeal strains, SR-441T, SR-412 and SR-188, were isolated from commercial salt samples. Cells were non-motile pleomorphic rod-shaped, and stained Gram-negative. Colonies were pink-pigmented. The three strains were able to grow with 1.7-4.6 M NaCl (optimum, 2.5 M), at pH 6.5-9.0 (opti...

journal_title：International journal of systematic and evolutionary microbiology

authors： Minegishi H,Shimogaki R,Enomoto S,Echigo A,Kondo Y,Nagaoka S,Shimane Y,Kamekura M,Itoh T,Ohkuma M,Nunoura T,Takai K,Usami R

更新日期：2016-12-01 00:00:00

abstract：:A Gram-negative, non-spore-forming, yellow-pigmented, slightly halophilic bacterial strain, SW-109(T), was isolated from a tidal flat of the Yellow Sea in Korea, and subjected to a polyphasic taxonomic study. This isolate did not produce bacteriochlorophyll a and contained ubiquinone-10 as the predominant respiratory ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yoon JH,Kang KH,Yeo SH,Oh TK

更新日期：2005-05-01 00:00:00

abstract：:Two Gram-negative, strictly aerobic bacterial strains, designated CL-AP6(T) and CL-AP22, were isolated from a culture of a green alga, Pyramimonas gelidicola, established from the Antarctic. Cells of the strains were straight rods and motile by means of a single polar flagellum. The strains grew with 0.5-8 % (w/v) NaC...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hwang CY,Zhang GI,Kang SH,Kim HJ,Cho BC

更新日期：2009-12-01 00:00:00

abstract：:Three strains (JA826T, JA912T and JA913), which were yellowish brown colour, rod to oval shaped, Gram-stain-negative, motile, phototrophic bacteria with a vesicular architecture of intracytoplasmic membranes, were isolated from different pond samples. The DNA G+C content of the three strains was between 64.6 and 65.5 ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Suresh G,Sailaja B,Ashif A,Dave BP,Sasikala C,Ramana CV

更新日期：2017-09-01 00:00:00

abstract：:This paper describes a phenotypic and genotypic investigation of the taxonomy of [Haemophilus] paragallinarum, Pasteurella gallinarum, Pasteurella avium and Pasteurella volantium, a major subcluster within the avian 16S rRNA cluster 18 of the family Pasteurellaceae. An extended phenotypic characterization was performe...

journal_title：International journal of systematic and evolutionary microbiology

authors： Blackall PJ,Christensen H,Beckenham T,Blackall LL,Bisgaard M

更新日期：2005-01-01 00:00:00