Algoriphagus trabzonensis sp. nov., isolated from freshwater, and emended description of Algoriphagus alkaliphilus.

abstract：:The phylogeny of the class Actinobacteria remains controversial, essentially because it is very sensitive to the choice of dataset and phylogenetic methods. We used a test proposed recently, based on complete genome data, which chooses among candidate species phylogenies based on the number of lateral gene transfers (...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sen A,Daubin V,Abrouk D,Gifford I,Berry AM,Normand P

更新日期：2014-11-01 00:00:00

abstract：:A Gram-negative, non-spore-forming, yellow-pigmented, slightly halophilic bacterial strain, SW-109(T), was isolated from a tidal flat of the Yellow Sea in Korea, and subjected to a polyphasic taxonomic study. This isolate did not produce bacteriochlorophyll a and contained ubiquinone-10 as the predominant respiratory ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yoon JH,Kang KH,Yeo SH,Oh TK

更新日期：2005-05-01 00:00:00

abstract：:A Gram-negative, non-motile bacterium, designated MJ17(T), was isolated from sludge at the Daejeon sewage disposal plant in South Korea. Comparative 16S rRNA gene sequence analysis showed that strain MJ17(T) belonged to the genus Paracoccus in the family Rhodobacteraceae of the class Alphaproteobacteria. 16S rRNA gene...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lee M,Woo SG,Park G,Kim MK

更新日期：2011-08-01 00:00:00

abstract：:A Gram-negative, non-motile, non-spore-forming, slightly halophilic bacterial strain, DSW-5(T), was isolated from seawater off Dokdo, Korea, and subjected to a polyphasic taxonomic study. It grew optimally at 25-28 degrees C and in the presence of 2 % (w/v) NaCl. Strain DSW-5(T) contained MK-6 as the predominant menaq...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yoon JH,Kang SJ,Oh TK

更新日期：2006-06-01 00:00:00

abstract：:Creeping thistle [Cirsium arvense (L.) Scop.] and dahlia (Dahlia sp.) plants showing typical symptoms of phytoplasma infection including yellowing, stunting, inflorescence and proliferation, were sampled; the presence of phytoplasma was confirmed by standard PCR using universal primers. RFLP analysis allowed classific...

journal_title：International journal of systematic and evolutionary microbiology

authors： Šafárˇová D,Zemánek T,Válová P,Navrátil M

更新日期：2016-04-01 00:00:00

abstract：:A bacterial strain, designated H-5T, was isolated from an artificial reservoir in Taiwan and characterized using a polyphasic taxonomic approach. Cells of strain H-5T were Gram-stain-negative, aerobic, motile by means of a single polar flagellum, rod-shaped, covered by large capsules and formed white colonies. Growth ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sheu C,Cai CY,Sheu SY,Li ZH,Chen WM

更新日期：2019-11-01 00:00:00

abstract：:The novel yeast species Candida leandrae is described based on eight isolates from decaying fruits of Leandra reversa Cogn. (Melastomataceae) in an Atlantic rainforest site in Brazil, one from a Convolvulaceae flower in Costa Rica and one from a drosophilid in Hawai'i. The strains differed in their colony morphology, ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Ruivo CCC,Lachance MA,Bacci M,Carreiro SC,Rosa CA,Pagnocca FC

更新日期：2004-11-01 00:00:00

abstract：:A strain of heterotrophic, facultatively anaerobic, marine bacterium, designated strain c121T, was isolated from coastal sediment of Luoyuan Bay, in Fujian province, PR China. Analysis of the 16S rRNA gene sequence revealed an affiliation with the genus Pseudidiomarina; the sequence similarity between c121T and Pseudi...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hu ZY,Li Y

更新日期：2007-11-01 00:00:00

abstract：:A Gram-stain-negative, non-spore-forming, motile, aerobic, rod-shaped bacteria strain, designated LCB8T, was isolated from the insect Teleogryllus occipitalis captured from a deserted cropland in Shuangliu district, Chengdu, PR China. Phylogenetic analysis on the basis of 16S rRNA gene sequence indicated that the stra...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hu M,Li X,Li Z,Liu B,Yang Z,Tian Y

更新日期：2020-04-01 00:00:00

abstract：:A Gram-stain-negative, rod-shaped (0.2-0.3×1.0-2.4 µm), catalase-positive, oxidase-negative and non-motile bacterium, designated strain RZ26T, was isolated from the marine red algae collected from the coast of Weihai, PR China. Growth of strain RZ26T occurred at 15-33 °C (optimum, 25-28 °C), pH 6.0-9.5 (optimum, pH 7....

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhang JY,Xia Y,Feng X,Mu DS,Du ZJ

更新日期：2020-06-01 00:00:00

abstract：:A bacterial strain, designated 17SD1-15T, was isolated from soil. Cells of this strain were Gram-stain-negative and aerobic rods. The major fatty acids of strain 17SD1-15T were iso-C15 : 0 and summed feature 4 (anteiso-C17 : 1 B and/or iso-C17 : 1 I). The polar lipids were phosphatidylethanolamine, one phospholipid an...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kim DU,Kim JY,Jang JH,Kim MK

更新日期：2018-10-01 00:00:00

abstract：:Sequences of the gene encoding the beta-subunit of the RNA polymerase (rpoB) were used to delineate the phylogeny of the family Pasteurellaceae. A total of 72 strains, including the type strains of the major described species as well as selected field isolates, were included in the study. Selection of universal rpoB-d...

journal_title：International journal of systematic and evolutionary microbiology

authors： Korczak B,Christensen H,Emler S,Frey J,Kuhnert P

更新日期：2004-07-01 00:00:00

abstract：:A Gram-stain-positive, obligately alkaliphilic bacterium designated strain GMBE 72(T) was isolated from mushroom compost from Yalova, located in the Marmara region of Turkey. Cells were aerobic, straight rods and they formed subterminal to terminal ellipsoidal endospores. The isolate was catalase-positive, oxidase-neg...

journal_title：International journal of systematic and evolutionary microbiology

authors： Denizci AA,Kazan D,Erarslan A

更新日期：2010-07-01 00:00:00

abstract：:A polyphasic taxonomic study (employing whole-cell protein and fatty acid analyses, 16S rDNA sequencing, DNA-DNA hybridization, determination of DNA G+C content, antibiotic susceptibility testing and extensive phenotypic characterization) was performed on 10 isolates that appeared to be related to Alcaligenes faecalis...

journal_title：International journal of systematic and evolutionary microbiology

authors： Coenye T,Vancanneyt M,Falsen E,Swings J,Vandamme P

更新日期：2003-11-01 00:00:00

abstract：:A lightly yellowish-pigmented, oxidase-negative bacterial strain (PB45.5T) isolated from the Nam Nao district of Phetchabun in central Thailand was investigated to determine its taxonomic position. Cells of the isolate showed a rod shaped appearance. The strain stained Gram-negative. Strain PB45.5T shared highest 16S ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Glaeser SP,Tobias NJ,Thanwisai A,Chantratita N,Bode HB,Kämpfer P

更新日期：2017-04-01 00:00:00

abstract：:The halophilic archaeal strain, YC82(T), was isolated from Yuncheng salt lake in Shanxi, PR China. Cells from strain YC82(T) were Gram-stain negative, pleomorphic rods, which lysed in distilled water and formed light-red colonies on solid media. Strain YC82(T) grew at 25-50 °C (optimum 37 °C), in 1.4-4.8 M NaCl (optim...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yuan PP,Zhang WJ,Han D,Cui HL

更新日期：2015-03-01 00:00:00

abstract：:A Gram-stain-negative, motile, aerobic and heterotrophic bacterium, designated as GYS_M3HT, was isolated from marine coastal sediment sampled at Xiamen Island. Cells were rod-shaped with one polar flagellum and weakly positive for oxidase and catalase. Growth of the strain occurred at pH 6-9 (optimum, pH 7-8), at 15-3...

journal_title：International journal of systematic and evolutionary microbiology

authors： Li J,Qi M,Lai Q,Liu X,Shao Z

更新日期：2020-09-01 00:00:00

abstract：:Pectobacterium isolates SS95T, SS54 and SS56 were collected from a potato field in the Chiniot district in the plains of the Punjab province, Pakistan. Sequencing of the gapA barcode revealed that these strains belong to a novel phylogenetic group separated from P.ectobacterium wasabiae and Pectobacterium parmentieri ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sarfraz S,Riaz K,Oulghazi S,Cigna J,Sahi ST,Khan SH,Faure D

更新日期：2018-11-01 00:00:00

abstract：:A Gram-negative, non-motile, rod-shaped and pink-pigmented bacterium, designated strain X2-1g(T), was isolated from a mixture of sand samples collected from the desert of Xinjiang, China, after exposure of the sand to 8 kGy gamma radiation. Phylogenetic analysis based on 16S rRNA gene sequencing indicated that this is...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zhang Q,Liu C,Tang Y,Zhou G,Shen P,Fang C,Yokota A

更新日期：2007-08-01 00:00:00

abstract：:The class Deltaproteobacteria comprises an ecologically and metabolically diverse group of bacteria best known for dissimilatory sulphate reduction and predatory behaviour. Although this lineage is the fourth described class of the phylum Proteobacteria, it rarely affiliates with other proteobacterial classes and is f...

journal_title：International journal of systematic and evolutionary microbiology

authors： Waite DW,Chuvochina M,Pelikan C,Parks DH,Yilmaz P,Wagner M,Loy A,Naganuma T,Nakai R,Whitman WB,Hahn MW,Kuever J,Hugenholtz P

更新日期：2020-11-01 00:00:00

abstract：:A mesophilic, facultatively anaerobic, autotrophic bacterium, designated strain Su4(T), was isolated from marine sediment. The isolate was able to utilize reduced sulfur compounds including thiosulfate, tetrathionate, sulfur and sulfide but not sulfite as the energy source. Growth occurred under aerobic and denitrifyi...

journal_title：International journal of systematic and evolutionary microbiology

authors： Park SJ,Pham VH,Jung MY,Kim SJ,Kim JG,Roh DH,Rhee SK

更新日期：2011-09-01 00:00:00

abstract：:A pure culture of an actinobacterium previously described as 'Candidatus Rhodoluna lacicola' strain MWH-Ta8 was established and deposited in two public culture collections. Strain MWH-Ta8(T) represents a free-living planktonic freshwater bacterium obtained from hypertrophic Meiliang Bay, Lake Taihu, PR China. The stra...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hahn MW,Schmidt J,Taipale SJ,Doolittle WF,Koll U

更新日期：2014-09-01 00:00:00

abstract：:A polycyclic aromatic hydrocarbons-degrading and acylhomoserine-lactone-producing marine bacterium, designated strain PQ-2(T), was isolated from marine biofilm collected from a boat shell at a harbour of Zhoushan island in Zhejiang Province, PR China. Strain PQ-2(T) is Gram-stain-negative, yellow-pigmented, non-motile...

journal_title：International journal of systematic and evolutionary microbiology

authors： Huang Y,Zeng Y,Feng H,Wu Y,Xu X

更新日期：2015-05-01 00:00:00

abstract：:A Gram-stain-positive, non-motile actinomycete, designated strain YIM 48875(T), was isolated from rhizosphere soil of Bletilla striata and its taxonomic position was established by using a polyphasic approach. Phylogenetic analysis based on 16S rRNA gene sequence data showed that strain YIM 48875(T) belonged to the ge...

journal_title：International journal of systematic and evolutionary microbiology

authors： Cao YR,Wang Q,Jin RX,Jiang Y,Lai HX,He WX,Xu LH,Jiang CL

更新日期：2011-06-01 00:00:00

abstract：:Fifty-eight new isolates were obtained from root nodules of common bean (Phaseolus vulgaris) cultivated in soils originating from different agroecological areas in Senegal and Gambia (West Africa). A polyphasic approach including both phenotypic and genotypic techniques was used to study the diversity of the 58 Rhizob...

journal_title：International journal of systematic and evolutionary microbiology

authors： Diouf A,de Lajudie P,Neyra M,Kersters K,Gillis M,Martinez-Romero E,Gueye M

更新日期：2000-01-01 00:00:00

abstract：:A novel, facultatively psychrophilic alkaliphile that grows on a chemically defined medium containing n-alkanes as the sole carbon source was isolated from a drain of a fish product-processing plant. The isolate was an aerobic, non-motile, gram-positive bacterium. The bacterium was catalase-positive and oxidase-negati...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yumoto I,Nakamura A,Iwata H,Kojima K,Kusumoto K,Nodasaka Y,Matsuyama H

更新日期：2002-01-01 00:00:00

abstract：:Two actinomycete strains were isolated from within the fynbos-rich area surrounded by the horseracing track at Kenilworth Racecourse in Cape Town, South Africa. Rapid molecular identification indicated that the isolates belonged to the family Micromonosporaceae. Based on 16S rRNA gene sequence blast analysis, the isol...

journal_title：International journal of systematic and evolutionary microbiology

authors： Everest GJ,Meyers PR

更新日期：2013-03-01 00:00:00

abstract：:A novel acidothermophilic archaeon, strain Ar-4(T), was isolated from a sulfuric hot spring in Tengchong, Yunnan, China. Cells of strain Ar-4(T) were Gram-staining-negative, irregular cocci and motile by means of flagella. Strain Ar-4(T) grew over a temperature range of 55-75 °C (optimum, 65 °C), a pH range of 2.5-5.5...

journal_title：International journal of systematic and evolutionary microbiology

authors： Liu LJ,You XY,Guo X,Liu SJ,Jiang CY

更新日期：2011-10-01 00:00:00

abstract：:Strain GI5T was isolated from a surface seawater sample collected from Garorim Bay (West Sea, Republic of Korea). The isolated strain was aerobic, Gram-stain-negative, rod-shaped, motile by means of a polar flagellum, negative for catalase and weakly positive for oxidase. The optimum growth pH, salinity and temperatur...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kim SH,Kim JG,Jung MY,Kim SJ,Gwak JH,Yu WJ,Roh SW,Kim YH,Rhee SK

更新日期：2018-07-01 00:00:00

abstract：:A Gram-stain-negative, motile, aerobic, rod-shaped bacterium with flagella, designated ZX-21T, was isolated from surface seawater of the East Sea in Zhoushan, China. Growth of strain ZX-21T was observed at 10--35  o°C (optimum, 30 °C), at pH 6.0-8.5 (pHoptimum 6.5-7.0) and in the presence of 0.5-8 % (w/v) NaCl (optimu...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yu XD,Yu XY,Fu GY,Zhao Z,Shen X,Sun C,Wu M

更新日期：2019-05-01 00:00:00