Pectobacterium punjabense sp. nov., isolated from blackleg symptoms of potato plants in Pakistan.

abstract：:Culture-based study of the faecal microbiome in two adult female subjects revealed the presence of two obligately anaerobic, non-spore-forming, rod-shaped, non-motile, Gram-negative bacterial strains that represent novel species. The first strain, designated 627T, was a fastidious, slow-growing, indole-positive bacter...

journal_title：International journal of systematic and evolutionary microbiology

authors： Shkoporov AN,Chaplin AV,Khokhlova EV,Shcherbakova VA,Motuzova OV,Bozhenko VK,Kafarskaia LI,Efimov BA

更新日期：2015-12-01 00:00:00

abstract：:We have carried out a polyphasic taxonomic characterization of Bacillus beijingensis DSM 19037(T) and Bacillus ginsengi DSM 19038(T), which are closely related phylogenetically to Bhargavaea cecembensis LMG 24411(T). All three strains are Gram-stain-positive, non-motile, moderately halotolerant and non-spore-forming. ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Verma P,Pandey PK,Gupta AK,Seong CN,Park SC,Choe HN,Baik KS,Patole MS,Shouche YS

更新日期：2012-10-01 00:00:00

abstract：:Strains PRI 2268 and PRI 3838(T) were isolated from two separate hot springs in the Torfajokull geothermal area of South Iceland. The cells were non-motile rods, approximately 0.3 microm in width and 1.5-2.5 microm in length. Electron microscopy revealed a Gram-negative cell-wall structure. The strains grew at 45-79 d...

journal_title：International journal of systematic and evolutionary microbiology

authors： Bjornsdottir SH,Petursdottir SK,Hreggvidsson GO,Skirnisdottir S,Hjorleifsdottir S,Arnfinnsson J,Kristjansson JK

更新日期：2009-12-01 00:00:00

abstract：:A Gram-staining-negative, strictly aerobic bacterial strain, designated MA7-20T, was isolated from a marine alga, Porphyridium marinum, in Korea. Cells showing oxidase-positive and catalase-positive activities were motile rods with bipolar flagella. Growth of strain MA7-20T was observed at 15-45 °C (optimum, 30-37 °C)...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hyeon JW,Jeong SE,Baek K,Jeon CO

更新日期：2017-02-01 00:00:00

abstract：:A Gram-positive, moderately halophilic rod, designated X5BT, was isolated from saline mud of the hypersaline lake Aran-Bidgol in Iran. Strain X5BT was a strictly aerobic, motile bacterium that produced ellipsoidal endospores at a central-subterminal position in non-swollen sporangia. The isolate grew at pH 7.0-10.0 (o...

journal_title：International journal of systematic and evolutionary microbiology

authors： Bagheri M,Didari M,Amoozegar MA,Schumann P,Sánchez-Porro C,Mehrshad M,Ventosa A

更新日期：2012-04-01 00:00:00

abstract：:A novel, extremely halophilic archaeon B3(T) was isolated from shrimp-salted seafood. Its morphology, physiology, biochemical features and 16S rRNA gene sequence were characterized. Strain B3(T) is non-motile, Gram-variable, requires at least 10 % (w/v) NaCl for growth and grows in the ranges of 21-50 degrees C and pH...

journal_title：International journal of systematic and evolutionary microbiology

authors： Roh SW,Nam YD,Chang HW,Sung Y,Kim KH,Oh HM,Bae JW

更新日期：2007-10-01 00:00:00

abstract：:Three strains representing a novel species of the Ogataea clade were isolated by W. T. Starmer and H. J. Phaff from rotting tissue of Opuntia phaeacantha in Arizona, USA. Analyses of the sequences of the D1/D2 LSU rRNA gene, ITS1-5.8S-ITS2, and translation elongation factor-1α (EF-1 α) showed that this novel species b...

journal_title：International journal of systematic and evolutionary microbiology

authors： Naumov GI,Naumova ES,Lee CF

更新日期：2017-07-01 00:00:00

abstract：:An aerobic, spore-forming, moderately halophilic bacterium, strain BH260(T), was isolated from a salt lake in China. Cells of this strain were found to be motile rods with flagella. The organism grew optimally at 30-32 degrees C and pH 8.0 in the presence of 12-15% (w/v) NaCl. Phylogenetic analysis based on 16S rRNA g...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lim JM,Jeon CO,Song SM,Lee JC,Ju YJ,Xu LH,Jiang CL,Kim CJ

更新日期：2005-09-01 00:00:00

abstract：:Strain KIT 00200-70066-1(T) was isolated from the sputum of a patient with pulmonary disease. Cells of the strain were Gram-variable, facultatively anaerobic, motile, spore-forming rods and formed colourless to white colonies on tryptic soy agar at 30 °C and pH 7. The pathogenicity of the strain is not k...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kim KK,Lee KC,Yu H,Ryoo S,Park Y,Lee JS

更新日期：2010-10-01 00:00:00

abstract：:Modern bacterial taxonomy is based on a polyphasic approach that combines phenotypic and genotypic characteristics, including 16S rRNA sequence similarity. However, the 95 % (for genus) and 98.7 % (for species) sequence similarity thresholds that are currently recommended to classify bacterial isolates were defined by...

journal_title：International journal of systematic and evolutionary microbiology

authors： Rossi-Tamisier M,Benamar S,Raoult D,Fournier PE

更新日期：2015-06-01 00:00:00

abstract：:A curved-rod-shaped bacterium was isolated from a marine (100 m depth) water sample collected from Bay of Bengal, Visakhapatnam, India. Strain NIO-S14T, was Gram-stain-negative, motile and pale-yellow. NIO-S14T was able to grow aerobically and anaerobically and could utilize a number of organic substrates. Major fatty...

journal_title：International journal of systematic and evolutionary microbiology

authors： Sudha Rani P,Saini MK,Pinnaka AK,Sampath Kumar G,Kumar S,Vemuluri VR,Tanuku NRS

更新日期：2019-01-01 00:00:00

abstract：:A Gram-stain-negative, non-motile, aerobic and ovoid or rod-shaped bacterium, designated MA4-5T, was isolated from ark shell (Scapharca broughtonii) collected from the South Sea, South Korea. The novel strain grew optimally at 25 °C, at pH 7.0-8.0 and in the presence of 2.0 % (w/v) NaCl. Neighbour-joining and maximum-...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kim YO,Park S,Nam BH,Park JM,Kim DG,Yoon JH

更新日期：2015-12-01 00:00:00

abstract：:A lightly yellowish-pigmented, oxidase-negative bacterial strain (PB45.5T) isolated from the Nam Nao district of Phetchabun in central Thailand was investigated to determine its taxonomic position. Cells of the isolate showed a rod shaped appearance. The strain stained Gram-negative. Strain PB45.5T shared highest 16S ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Glaeser SP,Tobias NJ,Thanwisai A,Chantratita N,Bode HB,Kämpfer P

更新日期：2017-04-01 00:00:00

abstract：:A Gram-staining-negative, strictly aerobic, non-motile, rod-shaped and flexirubin-type-pigmented strain, THG C4-1(T), was isolated from green tea leaves in Jangheung-gun, Republic of Korea. Strain THG C4-1(T) grew well at 20-30 °C, at pH 7.0-7.5 and in the absence of NaCl on nutrient agar. Based on 16S rRNA gene seque...

journal_title：International journal of systematic and evolutionary microbiology

authors： Kook M,Son HM,Ngo HTT,Yi TH

更新日期：2014-03-01 00:00:00

abstract：:A gram-negative, spiral or rod-shaped, non-spore-forming diazotrophic bacterium, designated CC-Nfb-7(T), was isolated from agricultural soil in Yunlin County, Taiwan. 16S rRNA gene sequence analysis showed that strain CC-Nfb-7(T) was most closely related to Azospirillum brasilense DSM 1690(T) (97.4 % 16S rRNA gene seq...

journal_title：International journal of systematic and evolutionary microbiology

authors： Lin SY,Shen FT,Young LS,Zhu ZL,Chen WM,Young CC

更新日期：2012-05-01 00:00:00

abstract：:A strictly aerobic, non-motile, rod-shaped actinomycete, designated strain JC2056(T), was isolated from a sediment sample of getbol, the tidal flat of Korea. Results of 16S rRNA gene sequence analysis indicated that the isolate belonged to the genus Nocardioides, with the highest similarity being to Nocardioides luteu...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yi H,Chun J

更新日期：2004-11-01 00:00:00

abstract：:A novel anamorphic species of yeast belonging to the genus Candida was isolated from tar in Canada. Morphological and physiological observations, as well as phylogenetic analyses, were performed. Conidiophores were produced, were usually short and had sympodial growth, numerous bud scars and a rachis-like structure. T...

journal_title：International journal of systematic and evolutionary microbiology

authors： Robert V,Bonjean B,Karutz M,Paschold H,Peeters W,Wubbolts MG

更新日期：2001-11-01 00:00:00

abstract：:Five coccoid, Gram-positive strains were isolated from the air of the 'Virgilkapelle' in Vienna. A representative of these five strains, V-108T, shared 99.0 and 98.4% 16S rDNA sequence similarity, respectively, with Agrococcus jenensis DSM 9580 and Agrococcus citreus DSM 12453T. Colonies of the five strains were white...

journal_title：International journal of systematic and evolutionary microbiology

authors： Zlamala C,Schumann P,Kämpfer P,Rosselló-Mora R,Lubitz W,Busse HJ

更新日期：2002-07-01 00:00:00

abstract：:A Gram-staining-negative, rod-shaped, non-spore-forming bacterium, designated strain RG4-7(T), was isolated from the moss Polytrichastrum formosum collected from Gawalong glacier in Tibet, China, and characterized by using a polyphasic taxonomic approach. The predominant fatty acids of strain RG4-7(T) were summed feat...

journal_title：International journal of systematic and evolutionary microbiology

authors： Chen XY,Zhao R,Tian Y,Kong BH,Li XD,Chen ZL,Li YH

更新日期：2014-04-01 00:00:00

abstract：:Two strains of Gram-negative, aerobic, non-pigmented, non-motile, rod-shaped, methane-oxidizing bacteria were isolated from an acidic forest cambisol near Marburg, Germany, and were designated as strains BL2(T) and A1. These bacteria were morphologically and phenotypically similar to Methylocella palustris K(T). The c...

journal_title：International journal of systematic and evolutionary microbiology

authors： Dunfield PF,Khmelenina VN,Suzina NE,Trotsenko YA,Dedysh SN

更新日期：2003-09-01 00:00:00

abstract：:A novel acidobacterial strain, Sakura1(T), was isolated from pieces of cherry bark. Cells of strain Sakura1(T) were non-motile, rod-shaped and stained Gram-negative. This strictly aerobic isolate was mesophilic but was able to grow at temperatures as low as 10 °C. Colonies were pink due to production of carotenoids, a...

journal_title：International journal of systematic and evolutionary microbiology

authors： Yamada K,Okuno Y,Meng XY,Tamaki H,Kamagata Y,Hanada S

更新日期：2014-08-01 00:00:00

abstract：:A Gram-negative, rod-shaped, moderately halophilic bacterium, designated strain YIM 91118(T), motile with a single polar flagellum, was isolated from Xinjiang province in north-west China and subjected to a polyphasic taxonomic study. Strain YIM 91118(T) grew optimally at 37 degrees C, pH 7.0-8.0 and 10% NaCl (w/v). I...

journal_title：International journal of systematic and evolutionary microbiology

authors： Tang SK,Wang Y,Cai M,Lou K,Mao PH,Jin X,Jiang CL,Xu LH,Li WJ

更新日期：2008-09-01 00:00:00

abstract：:A novel anaerobic, mesophilic, hydrogen-producing bacterium, designated strain M2/40(T), was isolated from a mesophilic, two-phase, laboratory-scale biogas reactor fed continuously with maize silage supplemented with 5% wheat straw. 16S rRNA gene sequence comparison revealed an affiliation to the genus Clostridium sen...

journal_title：International journal of systematic and evolutionary microbiology

authors： Hahnke S,Striesow J,Elvert M,Mollar XP,Klocke M

更新日期：2014-08-01 00:00:00

abstract：:A facultatively anaerobic and Gram-negative bacterium, designated strain PLHSC7-2T, was isolated from the gut of sea cucumber Apostichopusjaponicus that had been collected from the coastal area of Yantai, China. The cells were rod-shaped and motile by means of polar flagella. The novel isolate grew optimally at 28-30 ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Wang FQ,Ren LH,Lin YW,Sun GH,Du ZJ,Zhao JX,Liu XJ,Liu LJ

更新日期：2019-03-01 00:00:00

abstract：:A Gram-stain-negative, facultative anaerobic, red-pigmented, rod-shaped and non-motile strain (RC1_OXG_1FT) was isolated from deep sea water of the Indian Ocean. It was able to grow at pH 5-8 (optimum, pH 7), at 5-37 °C (optimum, 30 °C), and at salinity (% NaCl, w/v) of 0.5-5 % (optimum, 1-2 %). Catalase- and oxidase-...

journal_title：International journal of systematic and evolutionary microbiology

authors： Li J,Qi M,Lai Q,Wang G,Shao Z

更新日期：2020-07-01 00:00:00

abstract：:A rod-shaped, Gram-positive bacterium, strain TNJL143-2(T), having N-acyl-D-amino acid amidohydrolase (D-aminoacylase) activity, was isolated from a soil sample from Natori, Japan. It was a non-spore-forming, strictly aerobic bacterium without motility, showing a temperature optimum for growth of 30 degrees C and a pH...

journal_title：International journal of systematic and evolutionary microbiology

authors： Liu J,Nakayama T,Hemmi H,Asano Y,Tsuruoka N,Shimomura K,Nishijima M,Nishino T

更新日期：2005-03-01 00:00:00

abstract：:A Gram-negative, aerobic, rod-shaped, non-motile bacterium, designated strain HQ09T, was isolated from a marine sponge off the coast of Fields Peninsula, West Antarctica. Strain HQ09T grew at 4-35 °C (optimum, 25 °C), pH 5-9 (optimum, pH 7.0), and with 1-10% NaCl (optimum, 2 %). Phylogenetic analysis based on the 16S ...

journal_title：International journal of systematic and evolutionary microbiology

authors： Liao L,Su SY,Zhang YJ,Liu H,Zhang XY,Zhang J,Wen J,Chen B,Yu Y

更新日期：2021-01-01 00:00:00

abstract：:A Gram-stain-negative, non-motile, aerobic bacterial strain, designated T17T was isolated from a sample of sewage sediment from a Busan park (Republic of Korea). Phylogenetic analysis based on 16S rRNA gene sequences showed that strain T17T had the highest 16S rRNA gene sequence similarity to Dyadobacter soli KCTC 224...

journal_title：International journal of systematic and evolutionary microbiology

authors： Song Z,Song Y,Yu Y,Choi L,Wang G,Li M

更新日期：2019-02-01 00:00:00

abstract：:Four strains (km711T, km714, km542 and km524), representing a novel Legionella species, were isolated from aquatic environments in northern PR China. Cells were Gram-stain-negative, rod-shaped, microaerobic, motile and growth depended on l-cysteine. They grew at 25‒42 °C (optimum, 35‒37 °C) and could tolerate up to 1....

journal_title：International journal of systematic and evolutionary microbiology

authors： Li LH,Zhang L,Wu HY,Qu PH,Chen JC,Zhan XY,Zhu QY,Chen C,Hu CH

更新日期：2021-01-01 00:00:00

abstract：:Two strains of lactic acid bacteria, Nu27(T) and Nu29, were isolated from Nukadoko, rice bran paste for Japanese pickles. The isolates were Gram-stain-positive, rod-shaped, catalase-negative, non-motile and facultatively anaerobic lactic acid bacteria. The isolates showed identical 16S rRNA gene sequences. The closest...

journal_title：International journal of systematic and evolutionary microbiology

authors： Irisawa T,Tanaka N,Kitahara M,Sakamoto M,Ohkuma M,Okada S

更新日期：2014-08-01 00:00:00