Mucilaginibacter polytrichastri sp. nov., isolated from a moss (Polytrichastrum formosum), and emended description of the genus Mucilaginibacter.

Abstract:

:A Gram-staining-negative, rod-shaped, non-spore-forming bacterium, designated strain RG4-7(T), was isolated from the moss Polytrichastrum formosum collected from Gawalong glacier in Tibet, China, and characterized by using a polyphasic taxonomic approach. The predominant fatty acids of strain RG4-7(T) were summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c), iso-C15 : 0 and iso-C17 : 0 3-OH. The major polar lipids were phosphatidylethanolamine, one unidentified aminophospholipid, one unidentified phospholipid, two unidentified aminolipids and one unidentified lipid. Strain RG4-7(T) contained MK-7 as the dominant menaquinone and the G+C content of its genomic DNA was 39.1 mol%. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain RG4-7(T) was affiliated to species of the genus Mucilaginibacter, and its closest relative was Mucilaginibacter jinjuensis YC7004(T) (97.0 % sequence similarity). However, the DNA-DNA relatedness between this strain and strain RG4-7(T) was only 49.1±3.7 %. Based on phylogenetic inference and phenotypic data, strain RG4-7(T) is considered to represent a novel species of the genus Mucilaginibacter, for which the name Mucilaginibacter polytrichastri sp. nov. is proposed. The type strain is RG4-7(T) ( = CGMCC 1.12493(T) = DSM 26907(T)). An emended description of the genus Mucilaginibacter is also proposed.

authors

Chen XY,Zhao R,Tian Y,Kong BH,Li XD,Chen ZL,Li YH

doi

10.1099/ijs.0.055335-0

subject

Has Abstract

pub_date

2014-04-01 00:00:00

pages

1395-1400

issue

Pt 4

eissn

1466-5026

issn

1466-5034

journal_volume

64

pub_type

杂志文章
  • Chryseobacterium gwangjuense sp. nov., isolated from soil.

    abstract::A Gram-stain-negative, strictly aerobic, non-motile, rod-shaped bacterial strain, THG-A18(T), was isolated from soil of Gwangju province in South Korea. Strain THG-A18(T) grew optimally at 25-30 °C, at pH 7.0-8.0 and in the absence of NaCl. Strain THG-A18(T) displayed β-glucosidase activity, which enabled it to conver...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.052118-0

    authors: Park YJ,Son HM,Lee EH,Kim JH,Mavlonov GT,Choi KJ,Shin HS,Kook M,Yi TH

    更新日期:2013-12-01 00:00:00

  • Methanofollis ethanolicus sp. nov., an ethanol-utilizing methanogen isolated from a lotus field.

    abstract::A novel methane-producing archaeon, designated strain HASU(T), was isolated from a lotus field. Cells were Gram-negative, non-motile, irregular cocci, 2-3 mum in diameter, and occurred singly. Growth was observed at 15-40 degrees C (optimum, 37 degrees C) and pH 6.5-7.5 (optimum, pH 7.0). The G+C content of the genomi...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.003731-0

    authors: Imachi H,Sakai S,Nagai H,Yamaguchi T,Takai K

    更新日期:2009-04-01 00:00:00

  • Characterization of 'Candidatus Neoehrlichia lotoris' (family Anaplasmataceae) from raccoons (Procyon lotor).

    abstract::Recently, a novel ehrlichial organism was isolated from a raccoon (Procyon lotor) and the isolate (RAC413) was infectious to two naïve raccoons but not laboratory mice, rats or rabbits. In this study, amplification and sequencing of four gene targets (16S rRNA gene, groESL, gltA and rpoB) confirmed that the novel ehrl...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65836-0

    authors: Yabsley MJ,Murphy SM,Luttrell MP,Wilcox BR,Howerth EW,Munderloh UG

    更新日期:2008-12-01 00:00:00

  • Dysosmobacter welbionis gen. nov., sp. nov., isolated from human faeces and emended description of the genus Oscillibacter.

    abstract::A strictly anaerobic, Gram-stain-negative, non-spore-forming, non-motile, non-pigmented bacterium, strain J115T, was isolated from human faeces. Cells of strain J115T were straight rods, generally 1.8-3.0 µm, but could be up to 18 µm long. Growth occurred below 2 % (w/v) NaCl and 2 % (v/v) bile. Strain J115T produced ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003547

    authors: Le Roy T,Van der Smissen P,Paquot A,Delzenne N,Muccioli GG,Collet JF,Cani PD

    更新日期:2020-09-01 00:00:00

  • Chitinophaga barathri sp. nov., isolated from mountain soil.

    abstract::A Gram-stain-negative, non-motile, rod-shaped, aerobic bacterium, designated strain YLT18T, was isolated from mountain cliff soil of Enshi Grand Canyon in China. The major menaquinone was menaquinone 7 (MK-7) and the predominant fatty acids (>5 %) were iso-C15 : 0, C16 : 1ω5c, iso-C17 : 0 3-OH, summed feature 3 (C16 :...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000566

    authors: Zhang L,Liao S,Tan Y,Wang G,Wang D,Zheng S

    更新日期:2015-11-01 00:00:00

  • Deinococcus saudiensis sp. nov., isolated from desert.

    abstract::Two gamma- and UV-radiation-resistant, pink-coloured bacterial strains, designated YIM F302T and YIM F235, were isolated from the desert of Yanbu' al Bahr located in west of Saudi Arabia. Taxonomic positions of the two isolates were investigated by polyphasic taxonomic approaches. Cells of the two strains were Gram-st...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001479

    authors: Hussain F,Khan IU,Habib N,Xian WD,Hozzein WN,Zhang ZD,Zhi XY,Li WJ

    更新日期:2016-12-01 00:00:00

  • Sphingomonas lacunae sp. nov., isolated from a freshwater pond.

    abstract::A novel bacterial strain, designated CSW-10T, isolated from a freshwater pond in Taiwan, was characterized using a polyphasic taxonomic approach. Cells were Gram-stain-negative, aerobic, non-motile, rod-shaped and formed yellow-coloured colonies. Optimal growth occurred at 30 °C, pH 7, and in the absence of NaCl. Phyl...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.004491

    authors: Sheu SY,Yang CC,Sheu DS,Tsai JM,Chen WM

    更新日期:2020-11-01 00:00:00

  • A proposal for further integration of the cyanobacteria under the Bacteriological Code.

    abstract::This taxonomic note reviews the present status of the nomenclature of the cyanobacteria under the Bacteriological Code. No more than 13 names of cyanobacterial species have been proposed so far in the International Journal of Systematic and Evolutionary Microbiology (IJSEM)/International Journal of Systematic Bacterio...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.03008-0

    authors: Oren A

    更新日期:2004-09-01 00:00:00

  • Haloferax sulfurifontis sp. nov., a halophilic archaeon isolated from a sulfide- and sulfur-rich spring.

    abstract::A pleomorphic, extremely halophilic archaeon (strain M6(T)) was isolated from a sulfide- and sulfur-rich spring in south-western Oklahoma (USA). It formed small (0.8-1.0 mm), salmon pink, elevated colonies on agar medium. The strain grew in a wide range of NaCl concentrations (6 % to saturation) and required at least ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63211-0

    authors: Elshahed MS,Savage KN,Oren A,Gutierrez MC,Ventosa A,Krumholz LR

    更新日期:2004-11-01 00:00:00

  • Moorella humiferrea sp. nov., a thermophilic, anaerobic bacterium capable of growth via electron shuttling between humic acid and Fe(III).

    abstract::An anaerobic, thermophilic, spore-forming bacterium (strain 64-FGQ(T)) was isolated from a terrestrial hydrothermal spring from the Kamchatka peninsula, Russia. This strain utilized lactate as an electron donor, insoluble poorly crystalline Fe(III) oxide incorporated into alginate beads as a potential electron accepto...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.029009-0

    authors: Nepomnyashchaya YN,Slobodkina GB,Baslerov RV,Chernyh NA,Bonch-Osmolovskaya EA,Netrusov AI,Slobodkin AI

    更新日期:2012-03-01 00:00:00

  • Fluviimonas pallidilutea gen. nov., sp. nov., a new member of the family Cytophagaceae isolated from a freshwater river.

    abstract::A bacterial strain designated TQQ6(T) was isolated from a freshwater river in Taiwan and characterized using a polyphasic taxonomy approach. Cells of strain TQQ6(T) were strictly aerobic, Gram-staining-negative, poly-β-hydroxybutyrate-containing, non-motile, non-spore-forming, long rods surrounded by a thick capsule a...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.052423-0

    authors: Sheu SY,Chen YS,Shiau YW,Chen WM

    更新日期:2013-10-01 00:00:00

  • Planococcus ruber sp. nov., isolated from a polluted farmland soil sample.

    abstract::A pale-red-pigmented bacterial strain, designated CW1T, was isolated from a polluted soil sample in China and was characterized by a polyphasic taxonomic approach. Strain CW1T was Gram-stain-positive (or variable), coccoid, motile by a single polar flagellum and non-spore-forming. Growth was observed at 15-37 °C, but ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001960

    authors: Wang X,Wang Z,Zhao X,Huang X,Zhou Y,Li WJ

    更新日期:2017-08-01 00:00:00

  • Halofilum ochraceum gen. nov., sp. nov., a gammaproteobacterium isolated from a marine solar saltern.

    abstract::A Gram-stain-negative, oxidase-negative, catalase-positive, facultative anaerobe, designated XJ16T, was isolated from a marine solar saltern on the coast of Weihai, China. Cells of strain XJ16T were long and rod-shaped. The colonies were ochre in colour and were able to reduce nitrate to nitrite. Optimal growth occurr...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001718

    authors: Xia J,Zhao JX,Sang J,Chen GJ,Du ZJ

    更新日期:2017-04-01 00:00:00

  • Clostridium liquoris sp. nov., isolated from a fermentation pit used for the production of Chinese strong-flavoured liquor.

    abstract::Strain BEY10T was isolated from an old fermentation pit, which had been used for the production of Chinese strong-flavoured liquor for over 20 years. The strain was strictly anaerobic, Gram-stain positive, rod-shaped, non-motile and spore-forming. Strain BEY10T grew at temperatures of 22-47 °C (optimum 37 °C), at pH 5...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000787

    authors: Yin Q,Tao Y,Zhu X,Zhou Y,He X,Cheng L,Huang Y,Li D

    更新日期:2016-02-01 00:00:00

  • Reclassification of Nocardia corynebacterioides Serrano et al. 1972 (Approved Lists 1980) as Rhodococcus corynebacterioides comb. nov.

    abstract::The type strain of Nocardia corynebacterioides was the subject of a polyphasic taxonomic study. The 16S rRNA gene sequence was aligned with the sequences of representatives of the genera Corynebacterium, Dietzia, Gordonia, Mycobacterium, Nocardia, Rhodococcus, Skermania, Tsukamurella and Williamsia, and phylogenetic t...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63529-0

    authors: Yassin AF,Schaal KP

    更新日期:2005-05-01 00:00:00

  • Streptosporangium jomthongense sp. nov., an actinomycete isolated from rhizospheric soil and emendation of the genus Streptosporangium.

    abstract::A novel actinomycete, strain 30EHS(T), was isolated from the rhizospheric soil under an elephant ear plant (Caladium bicolor) in Jomthong district, Bangkok, Thailand. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain 30EHS(T) fell within the cluster of the genus Streptosporangium. Chemical co...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.061978-0

    authors: Intra B,Matsumoto A,Inahashi Y,Ōmura S,Panbangred W,Takahashi Y

    更新日期:2014-07-01 00:00:00

  • Alsobacter metallidurans gen. nov., sp. nov., a thallium-tolerant soil bacterium in the order Rhizobiales.

    abstract::A thallium-tolerant, aerobic bacterium, designated strain SK200a-9(T), isolated from a garden soil sample was characterized using a polyphasic approach. Comparative analysis of 16S rRNA gene sequences revealed that strain SK200a-9(T) was affiliated with an uncultivated lineage within the Alphaproteobacteria and the ne...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.054783-0

    authors: Bao Z,Sato Y,Fujimura R,Ohta H

    更新日期:2014-03-01 00:00:00

  • Pontibacter amylolyticus sp. nov., isolated from a deep-sea sediment hydrothermal vent field.

    abstract::A Gram-stain-negative, short rod-shaped bacterium, designated 9-2T, was isolated from a sediment sample collected from a hydrothermal vent field on the south-west Indian Ridge. It formed red colonies, produced carotenoid-like pigments and did not produce bacteriochlorophyll a. Strain 9-2T was positive for hydrolysis o...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000944

    authors: Wu YH,Zhou P,Jian SL,Liu ZS,Wang CS,Oren A,Xu XW

    更新日期:2016-04-01 00:00:00

  • Magnetospira thiophila gen. nov., sp. nov., a marine magnetotactic bacterium that represents a novel lineage within the Rhodospirillaceae (Alphaproteobacteria).

    abstract::A marine, magnetotactic bacterium, designated strain MMS-1(T), was isolated from mud and water from a salt marsh in Woods Hole, Massachusetts, USA, after enrichment in defined oxygen-concentration/redox-gradient medium. Strain MMS-1(T) is an obligate microaerophile capable of chemoorganoheterotrophic and chemolithoaut...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.037697-0

    authors: Williams TJ,Lefèvre CT,Zhao W,Beveridge TJ,Bazylinski DA

    更新日期:2012-10-01 00:00:00

  • Nitrosarchaeum koreense gen. nov., sp. nov., an aerobic and mesophilic, ammonia-oxidizing archaeon member of the phylum Thaumarchaeota isolated from agricultural soil.

    abstract::A mesophilic, chemolithoautotrophic, neutrophilic and aerobic ammonia-oxidizing archaeon, designated strain MY1T, was isolated from agricultural soil. Microscopic observation revealed short, rod-shaped cells with a diameter of 0.3-0.5 µm and length of 0.6-1.0 µm. The isolate had no flagella and pili, and possessed no ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002926

    authors: Jung MY,Islam MA,Gwak JH,Kim JG,Rhee SK

    更新日期:2018-10-01 00:00:00

  • Notification that new names of prokaryotes, new combinations and new taxonomic opinions have appeared in volume 66, part 5, of the IJSEM.

    abstract::This listing of names of prokaryotes published in a previous issue of the IJSEM is provided as a service to bacteriology to assist in the recognition of new names and new combinations. This procedure was proposed by the Judicial Commission [Minute 11(ii), Int J Syst Bacteriol41 (1991), p. 185]. The names given herein ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001168

    authors: Oren A,Garrity GM

    更新日期:2016-08-01 00:00:00

  • Ramlibacter alkalitolerans sp. nov., alkali-tolerant bacterium isolated from soil of ginseng.

    abstract::A novel bacterial strain, designated CJ661T, was isolated from soil of ginseng in Anseong, South Korea. Cells of strain CJ661T were white-coloured, Gram-staining-negative, non-motile, aerobic and rod-shaped. Strain CJ661T grew optimally at 30 °C and pH 7.0. The analysis of 16S rRNA gene sequence of strain CJ661T showe...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002342

    authors: Lee DH,Cha CJ

    更新日期:2017-11-01 00:00:00

  • Desulfosporosinus meridiei sp. nov., a spore-forming sulfate-reducing bacterium isolated from gasolene-contaminated groundwater.

    abstract::Eight strains of spore-forming, sulfate-reducing bacteria, isolated from groundwater contaminated with motor fuel [mostly benzene, toluene ethylbenzene and xylene (BTEX) compounds] in sandy soil near Perth, Australia, were closely related to Desulfosporosinus (previously Desulfotomaculum) orientis DSM 765T (95.3-97.3%...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-51-1-133

    authors: Robertson WJ,Bowman JP,Franzmann PD,Mee BJ

    更新日期:2001-01-01 00:00:00

  • Alistipes inops sp. nov. and Coprobacter secundus sp. nov., isolated from human faeces.

    abstract::Culture-based study of the faecal microbiome in two adult female subjects revealed the presence of two obligately anaerobic, non-spore-forming, rod-shaped, non-motile, Gram-negative bacterial strains that represent novel species. The first strain, designated 627T, was a fastidious, slow-growing, indole-positive bacter...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000617

    authors: Shkoporov AN,Chaplin AV,Khokhlova EV,Shcherbakova VA,Motuzova OV,Bozhenko VK,Kafarskaia LI,Efimov BA

    更新日期:2015-12-01 00:00:00

  • Lacinutrix cladophorae sp. nov., a flavobacterium isolated from the green alga Cladophora stimpsonii, transfer of Flavirhabdus iliipiscaria Shakeela et al. 2015 to the genus Lacinutrix as Lacinutrix iliipiscaria comb. nov. and emended description of the g

    abstract::A strictly aerobic, Gram-stain-negative, rod-shaped, motile by gliding and yellow-pigmented bacterium, designated strain 7Alg 4T, was isolated from the green alga Cladophora stimpsonii. Phylogenetic analysis based on 16S rRNA gene sequences revealed that the novel strain was affiliated to the family Flavobacteriaceae ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001353

    authors: Nedashkovskaya OI,Kim SG,Zhukova NV,Lee JS,Mikhailov VV

    更新日期:2016-11-01 00:00:00

  • Gene sequences useful for predicting relatedness of whole genomes in bacteria.

    abstract::Thirty-two protein-encoding genes that are distributed widely among bacterial genomes were tested for the potential usefulness of their DNA sequences in assigning bacterial strains to species. From publicly available data, it was possible to make 49 pairwise comparisons of whole bacterial genomes that were related at ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02713-0

    authors: Zeigler DR

    更新日期:2003-11-01 00:00:00

  • Fodinibius salinus gen. nov., sp. nov., a moderately halophilic bacterium isolated from a salt mine.

    abstract::A novel, moderately halophilic, rod-shaped bacterium, designated strain YIM D17(T), was isolated from a sample of sediment from a salt mine in Yunnan, south-western China. The taxonomy of strain YIM D17(T) was investigated using a polyphasic approach. Strain YIM D17(T) was Gram-stain-negative, strictly aerobic and non...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.025502-0

    authors: Wang YX,Liu JH,Xiao W,Zhang XX,Li YQ,Lai YH,Ji KY,Wen ML,Cui XL

    更新日期:2012-02-01 00:00:00

  • Lutibacter oricola sp. nov., a marine bacterium isolated from seawater.

    abstract::A bacterial strain, UDC377(T), was isolated from seawater samples collected at Seo-do on the coast of Dokdo island in the East Sea, and was subjected to taxonomic study using a polyphasic approach. Strain UDC377(T) was pale-yellow, Gram-staining-negative, non-motile, rod-shaped and aerobic. The strain grew optimally a...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.067132-0

    authors: Sung HR,Shin KS,Ghim SY

    更新日期:2015-02-01 00:00:00

  • Streptimonospora salina gen. nov., sp. nov., a new member of the family Nocardiopsaceae.

    abstract::Actinomycete strain YIM 90002T (= CCTCC 99003T = CCRC 16284T) was isolated from a soil sample collected from a salt lake in the west of China. The aerial mycelium of this organism is well developed but not fragmented and, at maturity, forms short chains of spores. Spores in short chains are oval- to rod-shaped and hav...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-51-2-357

    authors: Cui XL,Mao PH,Zeng M,Li WJ,Zhang LP,Xu LH,Jiang CL

    更新日期:2001-03-01 00:00:00

  • Muricauda olearia sp. nov., isolated from crude-oil-contaminated seawater, and emended description of the genus Muricauda.

    abstract::A Gram-staining-negative, rod-shaped and non-motile bacterium, designated CL-SS4T, was isolated from crude-oil-contaminated seawater from the west coast of Korea and was investigated by means of a polyphasic taxonomic approach. Strain CL-SS4T grew optimally at 25-30 degrees C, at pH 6.8-7.7 and in the presence of 2-3%...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.007708-0

    authors: Hwang CY,Kim MH,Bae GD,Zhang GI,Kim YH,Cho BC

    更新日期:2009-08-01 00:00:00