Proposal of Yaniaceae fam. nov. and Yania flava sp. nov. and emended description of the genus Yania.

Abstract:

:A coccoid actinobacterium strain (designated YIM 70178(T)) was isolated from a soil sample collected in Qinghai Province, China. The isolate grew well with an optimum salt concentration of 10-15% (KCl, w/v) but scarcely or not at all without salt. The cell-wall peptidoglycan type was A4alpha, L-Lys-gly-L-Glu. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, an unknown phospholipid and an unknown glycolipid. The predominant menaquinones were MK-8 and MK-9. The major fatty acid was anteiso-C(15:0). The DNA G+C content was 57.9 mol%. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain YIM 70178(T) was most closely related to the type strain of Yania halotolerans. DNA-DNA hybridization and comparison of physiological and chemotaxonomic characteristics demonstrated that strain YIM 70178(T) was different from Yania halotolerans. The name Yania flava sp. nov. is proposed, with strain YIM 70178(T) (=DSM 16377(T)=KCTC 19047(T)) as the type strain. Based on the phenotypic characteristics and phylogenetic position, as determined by 16S rRNA gene analysis and 16S rRNA signature nucleotide data, the genus description of Yania is therefore emended and strains YIM 70085(T) and YIM 70178(T) represent a novel family of the suborder Micrococcineae, for which the name Yaniaceae fam. nov. is proposed.

authors

Li WJ,Schumann P,Zhang YQ,Xu P,Chen GZ,Xu LH,Stackebrandt E,Jiang CL

doi

10.1099/ijs.0.63594-0

keywords:

subject

Has Abstract

pub_date

2005-09-01 00:00:00

pages

1933-1938

issue

Pt 5

eissn

1466-5026

issn

1466-5034

journal_volume

55

pub_type

杂志文章
  • Description of Cobetia amphilecti sp. nov., Cobetia litoralis sp. nov. and Cobetia pacifica sp. nov., classification of Halomonas halodurans as a later heterotypic synonym of Cobetia marina and emended descriptions of the genus Cobetia and Cobetia marina.

    abstract::A group of five Gram-negative, aerobic, halotolerant, non-pigmented bacteria isolated from shallow sediment samples and invertebrate specimens collected from the Gulf of Alaska and the Sea of Japan was subjected to taxonomic study. On the basis of 16S rRNA gene sequence analysis, the novel isolates were affiliated to ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.036863-0

    authors: Romanenko LA,Tanaka N,Svetashev VI,Falsen E

    更新日期:2013-01-01 00:00:00

  • Brevundimonas albigilva sp. nov., isolated from forest soil.

    abstract::Strain NHI-13T, a Gram-stain-negative, aerobic and short rod-shaped bacterium, was isolated from forest soil at Kyonggi University in Suwon, South Korea. It grew optimally in R2A medium, at 20-30 °C, in the presence of 0-4 % NaCl. Colonies resulting from incubation of the strain on agar plates for 2 days were circular...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000848

    authors: Pham VHT,Jeong S,Chung S,Kim J

    更新日期:2016-03-01 00:00:00

  • Methylomarinovum caldicuralii gen. nov., sp. nov., a moderately thermophilic methanotroph isolated from a shallow submarine hydrothermal system, and proposal of the family Methylothermaceae fam. nov.

    abstract::A novel methane-oxidizing bacterium, strain IT-9(T), was isolated from a shallow submarine hydrothermal system occurring in a coral reef in Japan. Strain IT-9(T) was a Gram-negative, aerobic, motile, coccoid or oval-shaped bacterium with the distinctive intracytoplasmic membrane arrangement of a type I methanotroph. S...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.058172-0

    authors: Hirayama H,Abe M,Miyazaki M,Nunoura T,Furushima Y,Yamamoto H,Takai K

    更新日期:2014-03-01 00:00:00

  • Rhodoligotrophos appendicifer gen. nov., sp. nov., an appendaged bacterium isolated from a freshwater Antarctic lake.

    abstract::A Gram-stain-negative, non-spore-forming, non-motile, irregularly circular, aerobic/microaerobic appendaged bacterium (strain 120-1(T)) was isolated from Naga-ike, one of the freshwater lakes in the Skarvsnes ice-free area of Antarctica. Strain 120-1(T) grew between 5 and 35 °C, with optimum growth at 30 °C. The pH ra...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.032953-0

    authors: Fukuda W,Yamada K,Miyoshi Y,Okuno H,Atomi H,Imanaka T

    更新日期:2012-08-01 00:00:00

  • Acidicapsa dinghuensis sp. nov., a novel acidobacterium isolated from forest soil.

    abstract::A bacterial strain, designated 4GSKXT, isolated from the forest soil of Dinghushan Biosphere Reserve, Guangdong Province, PR China (112° 31' E 23° 10' N), is proposed as a novel species of the genus Acidicapsa. Cells of strain 4GSKXT were aerobic, non-motile, Gram-stain-negative short rods that multiplied by binary di...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002846

    authors: Ou-Yang TN,Xia F,Qiu LH

    更新日期:2018-07-01 00:00:00

  • Flavisolibacter ginsenosidimutans sp. nov., with ginsenoside-converting activity isolated from soil used for cultivating ginseng.

    abstract::A Gram-reaction-negative, aerobic, non-motile and rod-shaped bacterial strain designated Gsoil 636T was isolated from soil of a ginseng cultivation field in Pocheon Province, South Korea and its taxonomic position was investigated using a polyphasic approach. Gsoil 636T grew at 18-30 °C and at pH 6.0-8.0 on R2A medium...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000660

    authors: Zhao Y,Liu Q,Kang MS,Jin F,Yu H,Im WT

    更新日期:2015-12-01 00:00:00

  • Sphingopyxis indica sp. nov., isolated from a high dose point hexachlorocyclohexane (HCH)-contaminated dumpsite.

    abstract::A Gram-stain-negative, aerobic, non-motile, non-spore-forming, rod-shaped and light-yellow-pigmented bacterium, designated DS15(T), was isolated from a soil sample collected from a hexachlorocyclohexane dumpsite in Lucknow, Uttar Pradesh, India. Strain DS15(T) showed highest 16S rRNA gene sequence similarity to Sphing...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.040840-0

    authors: Jindal S,Dua A,Lal R

    更新日期:2013-06-01 00:00:00

  • Massilia eurypsychrophila sp. nov. a facultatively psychrophilic bacteria isolated from ice core.

    abstract::Strain B528-3(T), a Gram-stain-negative, rod-shaped, aerobic, facultatively psychrophilic bacterium with polar flagella, was isolated from an ice core drilled from Muztagh Glacier, Xinjiang, China. The novel isolate was classified into the genus Massilia. The 16S rRNA gene sequence of the novel isolate shares a pairwi...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.000229

    authors: Shen L,Liu Y,Gu Z,Xu B,Wang N,Jiao N,Liu H,Zhou Y

    更新日期:2015-07-01 00:00:00

  • Streptococcus catagoni sp. nov., isolated from the respiratory tract of diseased Chacoan peccaries (Catagonus wagneri).

    abstract::Novel catalase-negative, Gram-stain-positive, beta-haemolytic, coccus-shaped organisms were isolated from Chacoan peccaries that died from respiratory disease. The initial API 20 Strep profiles suggested Streptococcus agalactiae with acceptable identification scores, but the 16S rRNA gene similarity (1548 bp) to avail...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.004471

    authors: Mühldorfer K,Szentiks CA,Wibbelt G,van der Linden M,Ewers C,Semmler T,Akimkin V,Blom J,Rau J,Eisenberg T

    更新日期:2020-11-01 00:00:00

  • Parapedobacter defluvii sp. nov., isolated from the sewage treatment packing of a coking chemical plant.

    abstract::Strain WY-1T, a Gram-stain-negative, non-spore-forming, rod-shaped, non-motile bacterium, was isolated from the sewage treatment packing of a coking chemical plant. Strain WY-1T grew over a temperature range of 15-45 °C (optimum, 30-37 °C), a pH range of 5.5-11.0 (optimum, pH 6.5-7.0) and an NaCl concentration range o...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002360

    authors: Yang L,Wang YH,Zhu HZ,Muhadesi JB,Wang BJ,Liu SJ,Jiang CY

    更新日期:2017-11-01 00:00:00

  • Flavobacterium dispersum sp. nov., isolated from a freshwater spring.

    abstract::A novel bacterial strain MVW-23T was isolated from a freshwater spring in Taiwan. The strain was Gram-staining-negative, strictly aerobic, motile by gliding, rod-shaped and formed translucent yellow colonies. Optimal growth occurred at 20-30 °C, pH 7.0, and in the presence of 0.5-1 % NaCl. Phylogenetic analyses based ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002305

    authors: Chen WM,Su CL,Sheu SY

    更新日期:2017-11-01 00:00:00

  • Salegentibacter mishustinae sp. nov., isolated from the sea urchin Strongylocentrotus intermedius.

    abstract::A bacterial strain, designated KMM 6049T, was isolated from the sea urchin Strongylocentrotus intermedius inhabiting the Sea of Japan. The bacterium studied was strictly aerobic, heterotrophic, yellow-pigmented, non-motile, Gram-negative and oxidase-, catalase-, beta-galactosidase- and alkaline phosphatase-positive. 1...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63297-0

    authors: Nedashkovskaya OI,Kim SB,Lysenko AM,Mikhailov VV,Bae KS,Kim IS

    更新日期:2005-01-01 00:00:00

  • Gemmobacter tilapiae sp. nov., a poly-β-hydroxybutyrate-accumulating bacterium isolated from a freshwater pond.

    abstract::A novel bacterium, designated strain Ruye-53(T), was isolated from a freshwater pond used to rear tilapiine cichlid fish in Taiwan. The taxonomic position of the novel strain was determined using a polyphasic approach. Strain Ruye-53(T) was Gram-reaction-negative, aerobic, cream-white coloured, rod-shaped, non-motile ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.044735-0

    authors: Sheu SY,Sheu DS,Sheu FS,Chen WM

    更新日期:2013-04-01 00:00:00

  • Thauera lacus sp. nov., isolated from a saline lake in Inner Mongolia.

    abstract::A Gram-stain-negative, facultatively anaerobic, motile and rod-shaped bacterium, designated D20T, was isolated from the saline Lake Dai in Inner Mongolia, PR China. Growth of strain D20T occurred at 25-45 °C (optimum, 40 °C), pH 4.0-12.0 (optimum, 8.0) and with 0-3 % NaCl (w/v); (optimum, 0-1 %). The results of 16S rR...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003679

    authors: Zheng WS,Liang QY,Du ZJ

    更新日期:2019-12-01 00:00:00

  • Lactobacillus brantae sp. nov., isolated from faeces of Canada geese (Branta canadensis).

    abstract::Three strains of lactic acid bacteria (LAB) were isolated from the faeces of apparently healthy wild Canada geese (Branta canadensis) in 2010 by cultivating faecal LAB on Rogosa SL agar under aerobic conditions. These three isolates were found to share 99.9 % gene sequence similarity of their 16S rRNA, their 16S-23S i...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.033852-0

    authors: Volokhov DV,Amselle M,Beck BJ,Popham DL,Whittaker P,Wang H,Kerrigan E,Chizhikov VE

    更新日期:2012-09-01 00:00:00

  • Rhodoluna lacicola gen. nov., sp. nov., a planktonic freshwater bacterium with stream-lined genome.

    abstract::A pure culture of an actinobacterium previously described as 'Candidatus Rhodoluna lacicola' strain MWH-Ta8 was established and deposited in two public culture collections. Strain MWH-Ta8(T) represents a free-living planktonic freshwater bacterium obtained from hypertrophic Meiliang Bay, Lake Taihu, PR China. The stra...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.065292-0

    authors: Hahn MW,Schmidt J,Taipale SJ,Doolittle WF,Koll U

    更新日期:2014-09-01 00:00:00

  • Hydrogenophaga caeni sp. nov., isolated from activated sludge.

    abstract::A Gram-negative bacterium, designated strain EMB71(T), was isolated from activated sludge used for enhanced biological phosphorus removal in a sequencing batch reactor. The cells of the isolate were facultatively aerobic, motile rods with single polar flagella. Growth was observed to occur at 15-35 degrees C (optimall...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64629-0

    authors: Chung BS,Ryu SH,Park M,Jeon Y,Chung YR,Jeon CO

    更新日期:2007-05-01 00:00:00

  • Methanosphaerula palustris gen. nov., sp. nov., a hydrogenotrophic methanogen isolated from a minerotrophic fen peatland.

    abstract::Peatlands are important sources of CH(4) emissions to the atmosphere and molecular surveys have identified a diverse, but mainly uncultured, euryarchaeal community in them. Characterization of a strain, E1-9c(T), associated with uncultured group E1, from a minerotrophic fen is reported. Cells were regular cocci, usual...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.006890-0

    authors: Cadillo-Quiroz H,Yavitt JB,Zinder SH

    更新日期:2009-05-01 00:00:00

  • Rhizobium anhuiense sp. nov., isolated from effective nodules of Vicia faba and Pisum sativum.

    abstract::Four rhizobia-like strains, isolated from root nodules of Pisum sativum and Vicia faba grown in Anhui and Jiangxi Provinces of China, were grouped into the genus Rhizobium but were distinct from all recognized species of the genus Rhizobium by phylogenetic analysis of 16S rRNA and housekeeping genes. The combined sequ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.000365

    authors: Zhang YJ,Zheng WT,Everall I,Young JPW,Zhang XX,Tian CF,Sui XH,Wang ET,Chen WX

    更新日期:2015-09-01 00:00:00

  • Planifilum yunnanense sp. nov., a thermophilic thermoactinomycete isolated from a hot spring.

    abstract::A thermophilic actinomycete, strain LA5(T), was isolated from a hot spring in Yunnan province, People's Republic of China. The isolate grew aerobically at temperatures of 50-75 degrees C. Aerobic mycelia were not observed. Single spores were produced along the substrate hypha. Strain LA5(T) was characterized chemotaxo...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64646-0

    authors: Zhang YX,Dong C,Biao S

    更新日期:2007-08-01 00:00:00

  • The cpcB-cpcA locus as a tool for the genetic characterization of the genus Arthrospira (Cyanobacteria): evidence for horizontal transfer.

    abstract::To investigate the genetic diversity of the genus Arthrospira and to compare it with other cyanobacteria, sequences of 670 nt from the phycocyanin operon were determined for 23 natural, cultivated or commercial strains of Arthrospira and compared with sequences from 20 other non-Arthrospira cyanobacterial strains. The...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-52-3-861

    authors: Manen JF,Falquet J

    更新日期:2002-05-01 00:00:00

  • Lentibacillus salinarum sp. nov., isolated from a marine solar saltern in Korea.

    abstract::A Gram-positive, motile, moderately halophilic and rod-shaped bacterium, strain AHS-1(T), was isolated from a marine solar saltern in Korea, and its exact taxonomic position was investigated by use of a polyphasic study. Strain AHS-1(T) grew optimally at pH 6.5-7.0 and 37-40 degrees C in the presence of 10-12% (w/v) N...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65351-0

    authors: Lee SY,Choi WY,Oh TK,Yoon JH

    更新日期:2008-01-01 00:00:00

  • Methylobacterium salsuginis sp. nov., isolated from seawater.

    abstract::Three pink-pigmented, facultatively methylotrophic strains, designated MP1, MP2 and MR(T), were isolated from seawater from southern China and characterized. Analysis of their complete 16S rRNA gene sequences revealed that they constituted three separate phylogenetic groups, showing the highest levels of similarity wi...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64877-0

    authors: Wang X,Sahr F,Xue T,Sun B

    更新日期:2007-08-01 00:00:00

  • Persicobacter psychrovividus sp. nov., isolated from shellfish, and emended descriptions of the genus Persicobacter and Persicobacter diffluens.

    abstract::The taxonomic position of three bacterial strains, Asr22-19T, NBRC 101035 and NBRC 101041, isolated from shellfish in Japan, was determined by using a polyphasic taxonomic approach. The strains were facultatively anaerobic, motile by gliding and Gram-staining-negative slender rods. Their major respiratory quinone was ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.016113-0

    authors: Muramatsu Y,Takahashi M,Kaneyasu M,Iino T,Suzuki KI,Nakagawa Y

    更新日期:2010-08-01 00:00:00

  • Glaciecola amylolytica sp. nov., an amylase-producing bacterium isolated from seawater.

    abstract::A Gram-stain-negative, aerobic, non-motile and coccus-shaped bacterium (THG-3.7T) was isolated from seawater. Growth occurred at 10-30 °C (optimum 25 °C), at pH 6-8 (optimum 7) and in the presence of 1-8 % (w/v) NaCl (optimum 4 %). Based on 16S rRNA gene sequence analysis, the nearest phylogenetic neighbours of strain...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003222

    authors: Xiao YK,Yan ZF,Kim Y,Lee HM,Trinh H,Yang JE,Won KH,Yi TH,Kook M

    更新日期:2019-04-01 00:00:00

  • Cupriavidus pinatubonensis sp. nov. and Cupriavidus laharis sp. nov., novel hydrogen-oxidizing, facultatively chemolithotrophic bacteria isolated from volcanic mudflow deposits from Mt. Pinatubo in the Philippines.

    abstract::Taxonomic studies were performed on ten hydrogen-oxidizing, facultatively chemolithotrophic bacteria that were isolated from volcanic mudflow deposits derived from the eruption of Mt. Pinatubo in the Philippines in 1991. Phylogenetic analysis based on 16S rRNA gene sequences indicated that these isolates belonged to t...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63922-0

    authors: Sato Y,Nishihara H,Yoshida M,Watanabe M,Rondal JD,Concepcion RN,Ohta H

    更新日期:2006-05-01 00:00:00

  • Detection and identification of a novel 16SrXIII subgroup phytoplasma associated with strawberry red leaf disease in Argentina.

    abstract::Strawberry red leaf phytoplasma was found in strawberry plants from production fields in Lules (Tucumán province) and Bella Vista (Corrientes province), Argentina. Characteristic strawberry red leaf symptoms were stunting, young leaves with yellowing at the edges, mature leaves which curled and were reddish at the aba...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.000276

    authors: Fernández FD,Meneguzzi NG,Guzmán FA,Kirschbaum DS,Conci VC,Nome CF,Conci LR

    更新日期:2015-08-01 00:00:00

  • Blautia stercoris sp. nov., isolated from human faeces.

    abstract::Strain GAM6-1T is a novel, strictly anaerobic, non-spore-forming, Gram-stain-positive bacterium that was isolated from the faeces of a healthy individual. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain GAM6-1T was most closely related to Blautia producta ATCC 27340T (95.7 % sequence simil...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.031625-0

    authors: Park SK,Kim MS,Roh SW,Bae JW

    更新日期:2012-04-01 00:00:00

  • Nocardia aurantiaca sp. nov., isolated from soil in Thailand.

    abstract::A novel actinomycete strain, CT2-14T, belonging to the genus Nocardia, was isolated from a soil sample collected from Phichit Province, Thailand. The taxonomic position of the strain was characterized using a polyphasic approach. The strain grew at 15-40 °C (optimum, 28-37 °C), pH 6-11 (optimum, pH 6-8) and on an Inte...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.004432

    authors: Kanchanasin P,Yuki M,Kudo T,Ohkuma M,Phongsopitanun W,Tanasupawat S

    更新日期:2020-10-01 00:00:00

  • Moniliella byzovii sp. nov., a chlamydospore-forming black yeast isolated from flowers.

    abstract::Yeasts of the genus Moniliella were isolated from 651 flower samples collected in Vietnam, using an enrichment medium containing 50 % glucose. Species of the genus Moniliella were found in 5 % of the samples and 54 strains were isolated. The strains were identified based on D1/D2 LSU rRNA gene sequences as M. megachil...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.049767-0

    authors: Thanh VN,Hien DD,Thom TT

    更新日期:2013-03-01 00:00:00