Pseudoalteromonas aestuariivivens sp. nov., isolated from a tidal flat.

Abstract:

:A Gram-stain-negative, aerobic, motile, rod-shaped or ovoid bacterial strain, designated DB-2T, was isolated from a tidal flat of the Yellow Sea in South Korea, and subjected to a taxonomic study using a polyphasic approach. Strain DB-2T grew optimally at 30 °C, at pH 7.0-8.0 and in the presence of 2.0-3.0 % (w/v) NaCl. Phylogenetic trees based on 16S rRNA gene sequences showed that strain DB-2T belonged to the genus Pseudoalteromonas. Strain DB-2T exhibited 16S rRNA gene sequence similarities of 97.17-97.36 % to the type strains of Pseudoalteromonas mariniglutinosa, Pseudoalteromonas spongiae and Pseudoalteromonas tetraodonis and of 93.79-96.99 % to the type strains of the other species of the genus Pseudoalteromonas. Strain DB-2T contained Q-8 as the predominant ubiquinone and C16 : 0, C18 : 1ω7c, summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c) and C12 : 0 3-OH as the major fatty acids. The major polar lipids detected in strain DB-2T were phosphatidylglycerol, phosphatidylethanolamine, two unidentified glycolipids, an unidentified phospholipid and an unidentified aminolipid. The DNA G+C content of strain DB-2T was 54.9 ± 0.2 mol% and mean DNA-DNA relatedness values with the type strains of P. mariniglutinosa, P. spongiae and P. tetraodonis were 10-17 %. Differential phenotypic properties, together with phylogenetic and genetic distinctiveness, revealed that strain DB-2T is separated from recognized species of the genus Pseudoalteromonas. On the basis of these data, strain DB-2T is considered to represent a novel species of the genus Pseudoalteromonas, for which the name Pseudoalteromonas aestuariivivens sp. nov. is proposed. The type strain is DB-2T ( = KCTC 42779T = CECT 8945T).

authors

Park S,Jung YT,Park DS,Yoon JH

doi

10.1099/ijsem.0.000995

subject

Has Abstract

pub_date

2016-05-01 00:00:00

pages

2078-2083

issue

5

eissn

1466-5026

issn

1466-5034

journal_volume

66

pub_type

杂志文章
  • Lewinella xylanilytica sp. nov., a member of the family Saprospiraceae isolated from coastal seawater.

    abstract::An orange-pigmented bacterium, designated strain 13-9-B8T, was isolated from a seawater sample collected at Marado, Jeju Island, South Korea. The novel strain was Gram-staining-negative, non-motile, non-gliding, rod-shaped and aerobic. A phylogenetic analysis based on 16S rRNA gene sequences revealed that the strain c...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000435

    authors: Sung HR,Lee JM,Kim M,Shin KS

    更新日期:2015-10-01 00:00:00

  • Candida leandrae sp. nov., an asexual ascomycetous yeast species isolated from tropical plants.

    abstract::The novel yeast species Candida leandrae is described based on eight isolates from decaying fruits of Leandra reversa Cogn. (Melastomataceae) in an Atlantic rainforest site in Brazil, one from a Convolvulaceae flower in Costa Rica and one from a drosophilid in Hawai'i. The strains differed in their colony morphology, ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.63259-0

    authors: Ruivo CCC,Lachance MA,Bacci M,Carreiro SC,Rosa CA,Pagnocca FC

    更新日期:2004-11-01 00:00:00

  • Sphingoaurantiacus capsulatus sp. nov., isolated from mountain soil, and emended description of the genus Sphingoaurantiacus.

    abstract::A novel Gram-stain-negative, strictly aerobic, non-motile, rod-shaped, capsule-forming bacterium, designated strain YLT33T, that formed orange-red colonies was isolated from mountain cliff soil from Enshi Grand Canyon, southwest China. Growth occurred at 4-35 °C (optimum 28 °C) and at pH 6.0-10.0 (optimum 7.0). It sho...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.001447

    authors: Tan Y,Wang Y,Wang D,Wang G,Zheng S

    更新日期:2016-12-01 00:00:00

  • Eudoraea adriatica gen. nov., sp. nov., a novel marine bacterium of the family Flavobacteriaceae.

    abstract::A novel aerobic, non-motile, Gram-negative bacterium, designated AS06/20a(T), was isolated from coastal waters of the Adriatic Sea and subjected to polyphasic taxonomic analysis. Cells were rod-shaped and formed non-pigmented punctiform colonies on agar plates. The novel isolate grew heterotrophically on a variety of ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.65446-0

    authors: Alain K,Intertaglia L,Catala P,Lebaron P

    更新日期:2008-10-01 00:00:00

  • Cecembia calidifontis sp. nov., isolated from a hot spring runoff, and emended description of the genus Cecembia.

    abstract::Two red-pigmented isolates, designated RQ-33(T) and TU-13, were recovered from hot spring runoffs on the Island of São Miguel in the Azores, Portugal. These organisms have an optimum growth temperature of approximately 45 °C and an optimum pH for growth between 7.5 and 8.5. Based on 16S rRNA gene sequence analysis, th...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.044537-0

    authors: Albuquerque L,Tiago I,Nobre MF,Veríssimo A,da Costa MS

    更新日期:2013-04-01 00:00:00

  • Vitellibacter nionensis sp. nov., isolated from a shallow water hydrothermal vent.

    abstract::A novel, Gram-stain-negative, non-motile, rod-shaped yellow bacterium, designated VBW088(T) was isolated from a shallow water hydrothermal vent in Espalamaca in the Azores. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain VBW088(T) clustered with three type strains of species of the genus Vite...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.070805-0

    authors: Rajasabapathy R,Mohandass C,Yoon JH,Dastager SG,Liu Q,Khieu TN,Son CK,Li WJ,Colaço A

    更新日期:2015-02-01 00:00:00

  • Multilocus sequence analysis of the family Halomonadaceae.

    abstract::Multilocus sequence analysis (MLSA) protocols have been developed for species circumscription for many taxa. However, at present, no studies based on MLSA have been performed within any moderately halophilic bacterial group. To test the usefulness of MLSA with these kinds of micro-organisms, the family Halomonadaceae,...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.032938-0

    authors: de la Haba RR,Márquez MC,Papke RT,Ventosa A

    更新日期:2012-03-01 00:00:00

  • 'Candidatus Magnetoglobus multicellularis', a multicellular, magnetotactic prokaryote from a hypersaline environment.

    abstract::Phylogenetic analysis and phenotypic characterization were used to assign a multicellular magnetotactic prokaryote the name 'Candidatus Magnetoglobus multicellularis'. 'Candidatus Magnetoglobus multicellularis' lives in a large hypersaline coastal lagoon from Brazil and has properties that are unique among prokaryotes...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64857-0

    authors: Abreu F,Martins JL,Silveira TS,Keim CN,de Barros HGPL,Filho FJG,Lins U

    更新日期:2007-06-01 00:00:00

  • Mycobacterium lacus sp. nov., a novel slowly growing, non-chromogenic clinical isolate.

    abstract::A strain of a novel non-chromogenic mycobacterium was isolated from synovial tissue from a 68-year-old female with bursitis of her right elbow. The slowly growing strain had a unique PCR-restriction enzyme analysis (PRA) profile of the hsp65 gene and 16S rRNA gene sequence in comparison with other mycobacterium specie...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-52-6-2135

    authors: Turenne C,Chedore P,Wolfe J,Jamieson F,Broukhanski G,May K,Kabani A

    更新日期:2002-11-01 00:00:00

  • Cohaesibacter haloalkalitolerans sp. nov., isolated from a soda lake, and emended description of the genus Cohaesibacter.

    abstract::Two novel Gram-stain-negative, motile, catalase-negative and oxidase-positive strains of bacteria (JC131(T) and JC112) were isolated from Lonar, a soda lake in India. Based on 16S rRNA gene sequence similarity studies, strains JC131(T) and JC112 belong to the family Cohaesibacteraceae of the class Alphaproteobacteria ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.050112-0

    authors: Sultanpuram VR,Lodha TD,Chintalapati VR,Chintalapati S

    更新日期:2013-11-01 00:00:00

  • Massilia tieshanensis sp. nov., isolated from mining soil.

    abstract::A bacterial isolate, designated strain TS3(T), was isolated from soil collected from a metal mine in Tieshan District, Daye City, Hubei Province, in central China. Cells of this strain were Gram-negative, motile and rod-shaped. The strain had ubiquinone Q-8 as the predominant respiratory quinone, phosphatidylethanolam...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.034306-0

    authors: Du Y,Yu X,Wang G

    更新日期:2012-10-01 00:00:00

  • Halobacteriovorax vibrionivorans sp. nov., a novel prokaryotic predator isolated from coastal seawater of China.

    abstract::Three prokaryotic predator strains, BL9T, BL10 and BL28, were isolated with Vibrio alginolyticus from coastal seawater of PR China. Cells of the strains were Gram-negative, vibrioid-shaped and motile with a single sheathed flagellum (25-28 nm wide). Cells were around 0.3×0.5-1.0 µm in size. The three strains were obli...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003703

    authors: Ye XS,Chen MX,Li HY,He XY,Zhao Y

    更新日期:2019-12-01 00:00:00

  • Dietzia psychralcaliphila sp. nov., a novel, facultatively psychrophilic alkaliphile that grows on hydrocarbons.

    abstract::A novel, facultatively psychrophilic alkaliphile that grows on a chemically defined medium containing n-alkanes as the sole carbon source was isolated from a drain of a fish product-processing plant. The isolate was an aerobic, non-motile, gram-positive bacterium. The bacterium was catalase-positive and oxidase-negati...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-52-1-85

    authors: Yumoto I,Nakamura A,Iwata H,Kojima K,Kusumoto K,Nodasaka Y,Matsuyama H

    更新日期:2002-01-01 00:00:00

  • Roseovarius scapharcae sp. nov., isolated from ark shell Scapharca broughtonii.

    abstract::A Gram-stain-negative, non-motile, aerobic and ovoid or rod-shaped bacterium, designated MA4-5T, was isolated from ark shell (Scapharca broughtonii) collected from the South Sea, South Korea. The novel strain grew optimally at 25 °C, at pH 7.0-8.0 and in the presence of 2.0 % (w/v) NaCl. Neighbour-joining and maximum-...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000633

    authors: Kim YO,Park S,Nam BH,Park JM,Kim DG,Yoon JH

    更新日期:2015-12-01 00:00:00

  • Cerasibacillus quisquiliarum gen. nov., sp. nov., isolated from a semi-continuous decomposing system of kitchen refuse.

    abstract::A moderately thermophilic and alkaliphilic bacillus, which had been reported and designated BLx (Haruta et al., 2002), was isolated from a semi-continuous decomposing system of kitchen refuse. Cells of strain BLxT were strictly aerobic, rod-shaped, motile and spore forming. The optimum temperature and pH for growth we...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02883-0

    authors: Nakamura K,Haruta S,Ueno S,Ishii M,Yokota A,Igarashi Y

    更新日期:2004-07-01 00:00:00

  • Streptomyces zinciresistens sp. nov., a zinc-resistant actinomycete isolated from soil from a copper and zinc mine.

    abstract::A filamentous actinomycete, designated strain CCNWNQ 0016(T), was isolated from soil from a zinc and copper mine in Shaanxi province, north-western China. A polyphasic taxonomic study was carried out to establish the status of strain CCNWNQ 0016(T). Chemical and morphological properties of the isolate were similar to ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.024018-0

    authors: Lin YB,Wang XY,Li HF,Wang NN,Wang HX,Tang M,Wei GH

    更新日期:2011-03-01 00:00:00

  • Paenibacillus lactis sp. nov., isolated from raw and heat-treated milk.

    abstract::Endospore-forming bacteria were recovered from individual packages from different processing lines in a dairy plant during a tenacious periodical contamination of their UHT-milk production. Two colony types were seen, one of which was identified as Bacillus sporothermodurans. Analysis of the 16S rRNA gene of the secon...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02822-0

    authors: Scheldeman P,Goossens K,Rodriguez-Diaz M,Pil A,Goris J,Herman L,De Vos P,Logan NA,Heyndrickx M

    更新日期:2004-05-01 00:00:00

  • Mycobacterium paragordonae sp. nov., a slowly growing, scotochromogenic species closely related to Mycobacterium gordonae.

    abstract::A previously undescribed, slowly growing, scotochromogenic mycobacterial strain (49061(T)) was isolated from a patient with pulmonary infections during the hsp65-sequence-based identification of Korean clinical isolates. Its 16S rRNA gene sequence was unique and the phylogenetic analysis based on 16S rRNA gene sequenc...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.051540-0

    authors: Kim BJ,Hong SH,Kook YH,Kim BJ

    更新日期:2014-01-01 00:00:00

  • Camelimonas abortus sp. nov., isolated from placental tissue of cattle.

    abstract::A gram-negative, rod-shaped, non-spore-forming bacterium, isolated from placental tissue of a cow, was investigated for its taxonomic position. On the basis of 16S rRNA gene sequence similarities, strain UK34/07-5(T) was shown to belong to the class Alphaproteobacteria, closely related to the type strain of Camelimona...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.034389-0

    authors: Kämpfer P,Scholz HC,Lodders N,Loncaric I,Whatmore AM,Busse HJ

    更新日期:2012-05-01 00:00:00

  • Genomic insights into a novel species Rhodoferax aquaticus sp. nov., isolated from freshwater.

    abstract::A novel non-phototrophic member of the genus Rhodoferax was obtained from freshwater. The purpose of this study was to analyse the genome of a nonphototrophic strain and propose a new species based on its phylogenetic, genomic, physiological and chemotaxonomic characteristics. The results of phylogenetic analysis base...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.004325

    authors: Li T,Zhuo Y,Jin CZ,Wu X,Ko SR,Jin FJ,Ahn CY,Oh HM,Lee HG,Jin L

    更新日期:2020-08-01 00:00:00

  • Dyadobacter luticola sp. nov., isolated from a sewage sediment sample.

    abstract::A Gram-stain-negative, non-motile, aerobic bacterial strain, designated T17T was isolated from a sample of sewage sediment from a Busan park (Republic of Korea). Phylogenetic analysis based on 16S rRNA gene sequences showed that strain T17T had the highest 16S rRNA gene sequence similarity to Dyadobacter soli KCTC 224...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003178

    authors: Song Z,Song Y,Yu Y,Choi L,Wang G,Li M

    更新日期:2019-02-01 00:00:00

  • Kineococcus radiotolerans sp. nov., a radiation-resistant, gram-positive bacterium.

    abstract::A gram-type positive, motile, coccus-shaped organism was isolated from a radioactive work area. Strain SRS30216T is an orange-pigmented bacterium that is catalase-positive, oxidase-negative and urease-negative. The orange pigment is most likely a carotenoid with absorption peaks at approximately 444, 471 and 501 nm. C...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-52-3-933

    authors: Phillips RW,Wiegel J,Berry CJ,Fliermans C,Peacock AD,White DC,Shimkets LJ

    更新日期:2002-05-01 00:00:00

  • Application of AFLP for taxonomic and epidemiological studies of Photobacterium damselae subsp. piscicida.

    abstract::A collection of 106 Photobacterium damselae subsp. piscicida strains and 19 Photobacterium damselae subsp. damselae strains, including reference and type strains, were genetically characterized using AFLP. The total genomic DNA of each bacterial strain was digested using restriction endonucleases HindIII and TaqI. Usi...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/00207713-50-3-1013

    authors: Thyssen A,Van Eygen S,Hauben L,Goris J,Swings J,Ollevier F

    更新日期:2000-05-01 00:00:00

  • Acuticoccus kandeliae sp. nov., isolated from rhizosphere soil of the mangrove plant Kandelia, and emended description of Acuticoccus yangtzensis.

    abstract::A novel bacterial strain, J103T, was isolated from rhizosphere soil of the mangrove plant Kandelia in Mai Po Inner Deep Bay Ramsar Site, Hong Kong. The strain was aerobic, Gram-stain-negative, oval-shaped with folds in the middle, non-motile and non-spore-forming. It grew at temperatures of 20-30 °C (optimum, 25-30 °C...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.002990

    authors: Yin Q,Liang J,Zhang L,Ma K,Hu ZL,Zhang Y,Xu Y

    更新日期:2018-10-01 00:00:00

  • Amphritea opalescens sp. nov., isolated from sediment adjacent to Fildes Peninsula, Antarctica.

    abstract::A taxonomic study was carried out on a Gram-stain-negative bacterium, namely strain ANRC-JH13T, isolated from a sediment sample collected at Jasper beach, adjacent to Fildes Peninsula, Antarctica. Cells of strain ANRC-JH13T were non-spore-forming rods and motile by the way of flagellum. Strain ANRC-JH13T was facultati...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.003359

    authors: Han X,Zhang J,Zhang Y,Liu J,Fang W,Fang Z,Xiao Y

    更新日期:2019-06-01 00:00:00

  • Algibacter lectus gen. nov., sp. nov., a novel member of the family Flavobacteriaceae isolated from green algae.

    abstract::Three strains of the marine, gliding, pigmented, facultatively anaerobic, heterotrophic, Gram-negative bacteria were isolated from the green algae Acrosiphonia sonderi (Kütz) Kornm and Ulva fenestrata Ruprecht inhabiting the Sea of Japan. 16S rDNA sequence analysis indicated that the strains were members of the family...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02949-0

    authors: Nedashkovskaya OI,Kim SB,Han SK,Rhee MS,Lysenko AM,Rohde M,Zhukova NV,Frolova GM,Mikhailov VV,Bae KS

    更新日期:2004-07-01 00:00:00

  • Vibrio neptunius sp. nov., Vibrio brasiliensis sp. nov. and Vibrio xuii sp. nov., isolated from the marine aquaculture environment (bivalves, fish, rotifers and shrimps).

    abstract::The fluorescent amplified fragment length polymorphism (FAFLP) groups A5 (21 isolates), A8 (6 isolates) and A23 (3 isolates) distinguished in an earlier paper (Thompson et al., Syst Appl Microbiol 24, 520-538, 2001) were examined in more depth. These three groups were phylogenetically related to Vibrio tubiashii, but ...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.02447-0

    authors: Thompson FL,Li Y,Gomez-Gil B,Thompson CC,Hoste B,Vandemeulebroecke K,Rupp GS,Pereira A,De Bem MM,Sorgeloos P,Swings J

    更新日期:2003-01-01 00:00:00

  • Paraflavitalea devenefica sp. nov., isolated from urban soil.

    abstract::A Gram-stain-negative, rod-shaped, mesophilic, milky white-pigmented, aerobic, non-spore-forming and non-flagellated bacterium, designated strain X16T, was isolated from urban soil of Zibo, Shandong, China. According to 16S rRNA gene sequence analysis, the isolate showed highest similarities with Paraflavitalea soli 5...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.004587

    authors: Hou X,Liu H,Shang Y,Mao S,Li S,Sang F,Deng H,Wang L,Kong L,Zhang C,Ding Z,Gao Y,Wei S,Chen Z

    更新日期:2021-01-01 00:00:00

  • Reclassification of Thermoterrabacterium ferrireducens as Carboxydothermus ferrireducens comb. nov., and emended description of the genus Carboxydothermus.

    abstract::Similarities in phylogeny and metabolic properties between the type species of two monospecific genera of thermophilic anaerobic bacteria, Carboxydothermus hydrogenoformans and Thermoterrabacterium ferrireducens, and analysis of their recently available 16S rRNA gene sequences warranted clarification of their taxonomi...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijs.0.64503-0

    authors: Slobodkin AI,Sokolova TG,Lysenko AM,Wiegel J

    更新日期:2006-10-01 00:00:00

  • Flavisolibacter ginsenosidimutans sp. nov., with ginsenoside-converting activity isolated from soil used for cultivating ginseng.

    abstract::A Gram-reaction-negative, aerobic, non-motile and rod-shaped bacterial strain designated Gsoil 636T was isolated from soil of a ginseng cultivation field in Pocheon Province, South Korea and its taxonomic position was investigated using a polyphasic approach. Gsoil 636T grew at 18-30 °C and at pH 6.0-8.0 on R2A medium...

    journal_title:International journal of systematic and evolutionary microbiology

    pub_type: 杂志文章

    doi:10.1099/ijsem.0.000660

    authors: Zhao Y,Liu Q,Kang MS,Jin F,Yu H,Im WT

    更新日期:2015-12-01 00:00:00